Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 6.9e-90 334.0 170 100.0
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 6.5e-88 327.4 170 97.6
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 1.9e-87 325.9 170 96.5
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 1.9e-87 325.9 170 96.5
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 2.5e-87 325.5 170 97.1
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 2.5e-87 325.5 170 97.1
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 4.2e-87 324.7 170 97.6
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 5.5e-87 324.3 170 97.1
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 5.5e-87 324.3 170 97.1
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 9.4e-87 323.6 170 97.1
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 1.2e-86 323.2 170 95.9
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 1.2e-86 323.2 170 97.1
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 1.2e-86 323.2 170 96.5
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 1.2e-86 323.2 169 97.0
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 1.2e-86 323.2 170 96.5
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 1.6e-86 322.8 170 95.9
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 1.6e-86 322.8 169 96.4
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 3.6e-86 321.6 170 95.9
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 3.6e-86 321.6 170 95.3
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 4.7e-86 321.2 170 94.1
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 7.9e-86 320.5 170 95.3
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 7.9e-86 320.5 170 95.3
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 7.9e-86 320.5 170 95.3
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 7.9e-86 320.5 170 95.3
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 7.9e-86 320.5 170 94.7
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 95.3
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 94.7
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 1.8e-85 319.3 170 95.3
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 2.3e-85 318.9 170 94.1
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 2.3e-85 318.9 170 94.7
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 3.0e-85 318.5 170 94.1
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 5.2e-85 317.8 170 94.7
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 6.7e-85 317.4 170 94.1
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 6.7e-85 317.4 170 94.7
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 6.7e-85 317.4 170 94.7
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 8.8e-85 317.0 170 93.5
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.1e-84 316.6 176 93.2
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 1.1e-84 316.6 169 94.7
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 1.5e-84 316.2 170 93.5
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 2.6e-84 315.5 170 93.5
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 2.6e-84 315.5 170 93.5
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 2.6e-84 315.5 168 94.6
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 2.6e-84 315.5 168 94.6
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 2.6e-84 315.5 168 94.6
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 93.5
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 93.5
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 9.7e-84 313.5 168 92.3
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 93.5
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 93.5
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 1.7e-83 312.8 170 92.4
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 1.7e-83 312.8 170 92.9
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 2.2e-83 312.4 167 95.2
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 6.3e-83 310.8 170 91.8
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 6.3e-83 310.8 170 91.8
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 6.3e-83 310.8 183 88.5
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 6.3e-83 310.8 170 91.8
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 6.3e-83 310.8 170 91.8
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 8.2e-83 310.5 170 91.8
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 1.1e-82 310.1 168 92.9
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 1.4e-82 309.7 167 93.4
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 1.4e-82 309.7 170 91.8
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 2.4e-82 308.9 183 88.0
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 4.1e-82 308.1 188 85.1
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 5.3e-82 307.8 170 93.5
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 9.1e-82 307.0 190 86.3
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 1.2e-81 306.6 170 90.0
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 5.9e-81 304.3 170 91.8
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 5.9e-81 304.3 165 91.5
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 7.7e-81 303.9 169 92.3
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 7.7e-81 303.9 157 96.2
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 6.5e-80 300.8 169 91.1
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 2.1e-78 295.8 168 88.7
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 3.6e-78 295.0 168 87.5
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 1.0e-77 293.5 167 87.4
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 1.4e-77 293.1 157 93.0
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.3e-77 292.4 175 88.6
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 9.7e-76 287.0 162 90.7
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 2.8e-75 285.4 164 87.8
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 2.8e-75 285.4 151 95.4
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 5.3e-74 281.2 150 94.0
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 7.0e-74 280.8 147 96.6
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 7.0e-74 280.8 151 92.7
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.0e-72 276.9 147 95.2
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 7.2e-71 270.8 147 93.2
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 6.1e-70 267.7 169 76.3
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 8.0e-70 267.3 140 95.7
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.0e-69 266.9 139 96.4
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.8e-69 266.2 140 94.3
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 1.5e-68 263.1 139 94.2
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 2.6e-68 262.3 170 81.8
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 1.3e-67 260.0 139 92.8
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 3.7e-67 258.5 262 58.8
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 2.0e-65 252.7 164 81.1
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 2.5e-63 245.7 170 78.2
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 4.2e-63 245.0 170 78.8
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.7e-62 242.3 168 76.8
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 4.7e-62 241.5 128 95.3
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 8.0e-62 240.7 130 94.6
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 4.1e-58 228.4 229 61.6
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 5.4e-58 228.0 125 93.6
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.2e-57 226.9 120 96.7
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.2e-57 226.9 120 96.7
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 3.5e-57 225.3 233 58.8
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 7.7e-57 224.2 129 87.6
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 8.3e-51 204.1 109 95.4
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 1.8e-50 203.0 110 92.7
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 1.8e-50 203.0 169 59.8
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 3.1e-45 185.7 115 83.5
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 2.4e-42 176.0 176 51.7
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.1e-39 167.2 170 57.1
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 2.1e-33 146.4 75 96.0
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 6.0e-33 144.8 75 96.0
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 7.8e-33 144.4 117 66.7
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 3.0e-32 142.5 76 92.1
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 2.7e-25 119.4 73 79.5
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 1.1e-23 114.0 90 67.8
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 1.9e-23 113.2 60 91.7
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 2.4e-18 96.3 50 92.0
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 6.9e-13 78.2 38 89.5
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.9e-10 70.1 39 82.1
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 3.3e-07 59.3 59 59.3


User provided reference genes

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