Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 1.2e-130 469.9 244 100.0
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 4.5e-58 228.8 149 80.5
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 4.4e-21 105.9 147 48.3
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 7.5e-21 105.1 146 50.0
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 2.9e-20 103.2 138 48.6
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 4.9e-20 102.4 144 47.2
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 1.9e-19 100.5 106 54.7
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 5.4e-19 99.0 155 46.5
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 7.0e-19 98.6 158 43.7
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 2.7e-18 96.7 145 45.5
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 4.6e-18 95.9 141 46.1
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 4.6e-18 95.9 140 46.4
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 1.0e-17 94.7 162 43.2
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.3e-17 94.4 145 46.2
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 1.7e-17 94.0 150 44.0
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 1.7e-17 94.0 162 43.2
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 2.3e-17 93.6 139 46.0
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 6.6e-17 92.0 139 48.2
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 1.1e-16 91.3 147 44.2
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 1.1e-16 91.3 146 44.5
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 1.5e-16 90.9 136 46.3
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.5e-16 90.9 136 46.3
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 5.6e-16 89.0 136 46.3
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 7.3e-16 88.6 150 44.0
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 7.3e-16 88.6 134 45.5
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 9.5e-16 88.2 138 44.9
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 1.2e-15 87.8 145 43.4
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 1.2e-15 87.8 140 47.1
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 1.2e-15 87.8 128 45.3
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 1.6e-15 87.4 147 40.1
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 2.1e-15 87.0 134 45.5
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 4.7e-15 85.9 194 37.1
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 4.7e-15 85.9 114 49.1
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 4.7e-15 85.9 144 42.4
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 6.2e-15 85.5 97 53.6
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 6.2e-15 85.5 144 42.4
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 8.1e-15 85.1 137 42.3
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 8.1e-15 85.1 171 40.4
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 1.8e-14 84.0 141 43.3
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 1.8e-14 84.0 136 44.1
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 2.3e-14 83.6 133 42.1
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 2.3e-14 83.6 140 47.1
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 2.3e-14 83.6 129 47.3
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 4.0e-14 82.8 139 43.2
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 5.2e-14 82.4 144 43.1
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 5.2e-14 82.4 144 43.8
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 6.8e-14 82.0 136 44.1
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 6.8e-14 82.0 145 44.1
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 8.9e-14 81.6 140 43.6
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 1.2e-13 81.3 142 41.5
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.5e-13 80.9 137 44.5
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 1.5e-13 80.9 119 46.2
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 1.5e-13 80.9 68 55.9
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 2.0e-13 80.5 139 41.0
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.0e-13 80.5 145 42.8
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 2.0e-13 80.5 145 42.8
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 2.0e-13 80.5 146 41.8
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 2.6e-13 80.1 136 45.6
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 3.4e-13 79.7 143 40.6
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 5.8e-13 79.0 83 53.0
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 5.8e-13 79.0 144 42.4
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 7.5e-13 78.6 146 44.5
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.3e-12 77.8 134 42.5
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 2.2e-12 77.0 138 42.8
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 2.9e-12 76.6 99 49.5
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 3.7e-12 76.3 150 38.0
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 4.9e-12 75.9 126 43.7
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 6.4e-12 75.5 144 41.0
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 8.3e-12 75.1 150 39.3
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 1.4e-11 74.3 133 42.1
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 1.9e-11 73.9 144 41.0
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 3.2e-11 73.2 141 40.4
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 5.4e-11 72.4 130 39.2
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 7.1e-11 72.0 137 44.5
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 1.2e-10 71.2 137 38.0
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 2.1e-10 70.5 95 47.4
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 2.7e-10 70.1 136 40.4
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 1.7e-09 67.4 141 37.6
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 2.3e-09 67.0 142 38.0
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 2.3e-09 67.0 145 41.4
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 3.0e-09 66.6 142 40.1
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 5.1e-09 65.9 138 40.6
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 5.1e-09 65.9 122 42.6
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 1.5e-08 64.3 136 40.4
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 5.6e-08 62.4 98 44.9
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 5.6e-08 62.4 99 44.4
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 5.6e-08 62.4 162 37.7
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 7.3e-08 62.0 111 39.6
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 7.3e-08 62.0 97 43.3
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 9.5e-08 61.6 164 37.2
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 1.6e-07 60.8 142 37.3
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.1e-07 60.5 95 42.1
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 2.1e-07 60.5 104 39.4
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 2.8e-07 60.1 139 36.0
A03p48310 Brassica napus HOM05D006398 ORTHO05D007983 2.4e-06 57.0 105 42.9
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 2.4e-06 57.0 135 37.0
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 6.8e-06 55.5 138 38.4
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 8.9e-06 55.1 48 62.5


User provided reference genes

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