Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2000 Ceratophyllum demersum HOM05D003991 ORTHO05D004883 0.0e+00 1526.5 804 100.0
TAR622G0714 Trochodendron aralioides HOM05D003991 ORTHO05D004883 5.1e-300 1034.2 809 67.9
Nn4g23516 Nelumbo nucifera HOM05D003991 ORTHO05D004883 7.4e-299 1030.4 804 68.2
MBI17_g07944_MAGBIO Magnolia biondii HOM05D003991 ORTHO05D004883 3.2e-294 1015.0 812 67.7
PSO063G1675 Papaver somniferum HOM05D003991 ORTHO05D004883 1.6e-285 986.1 809 64.6
PSO782G2666 Papaver somniferum HOM05D003991 ORTHO05D004883 5.1e-284 981.1 809 64.5
Lj4A124G55 Lonicera japonica HOM05D003991 ORTHO05D004883 3.7e-282 974.9 808 63.0
Hma1.2p1_1837F.1_g304750 Hydrangea macrophylla HOM05D003991 ORTHO05D004883 1.1e-281 973.4 823 64.2
Potri.017G100300 Populus trichocarpa HOM05D003991 ORTHO05D004883 1.4e-281 973.0 809 63.9
Ciclev10011098m.g Citrus clementina HOM05D003991 ORTHO05D004883 1.5e-280 969.5 807 63.8
Manes.02G059600 Manihot esculenta HOM05D003991 ORTHO05D004883 3.4e-280 968.4 809 62.9
CANSAT64G1645 Cannabis sativa HOM05D003991 ORTHO05D004883 7.7e-280 967.2 817 62.5
ATR0605G126 Amborella trichopoda HOM05D003991 ORTHO05D004883 1.7e-279 966.1 810 63.0
TWI32G1311 Tripterygium wilfordii HOM05D003991 ORTHO05D004883 3.8e-279 964.9 810 63.6
Potri.004G114600 Populus trichocarpa HOM05D003991 ORTHO05D004883 6.5e-279 964.1 809 63.5
TWI34G0665 Tripterygium wilfordii HOM05D003991 ORTHO05D004883 9.4e-278 960.3 806 62.7
Manes.01G103600 Manihot esculenta HOM05D003991 ORTHO05D004883 1.6e-277 959.5 811 62.9
TAR374G0063 Trochodendron aralioides HOM05D003991 ORTHO05D004883 4.6e-277 958.0 765 67.1
Gorai.001G207000 Gossypium raimondii HOM05D003991 ORTHO05D004883 7.4e-275 950.7 808 63.1
CiPaw.03G082800 Carya illinoinensis HOM05D003991 ORTHO05D004883 1.1e-273 946.8 790 62.7
Prupe.3G248800 Prunus persica HOM05D003991 ORTHO05D004883 1.4e-273 946.4 803 62.1
Duzib138G0045 Durio zibethinus HOM05D003991 ORTHO05D004883 1.8e-273 946.0 817 62.3
DCAR_011017 Daucus carota HOM05D003991 ORTHO05D004883 4.1e-273 944.9 812 61.9
MD17G1065900 Malus domestica HOM05D003991 ORTHO05D004883 1.5e-272 943.0 807 62.2
MD09G1074500 Malus domestica HOM05D003991 ORTHO05D004883 1.3e-271 939.9 808 62.0
Atru.chr8.642 Acer truncatum HOM05D003991 ORTHO05D004883 1.7e-271 939.5 810 62.1
COL.COLO4_10252 Corchorus olitorius HOM05D003991 ORTHO05D004883 1.7e-271 939.5 816 62.1
Peaxi162Scf01002g00121 Petunia axillaris HOM05D003991 ORTHO05D004883 2.9e-271 938.7 798 61.8
CSS0001564 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 5.0e-271 937.9 813 63.5
Cfa007697 Carpinus fangiana HOM05D003991 ORTHO05D004883 1.9e-270 936.0 810 63.2
Eucgr.I02064 Eucalyptus grandis HOM05D003991 ORTHO05D004883 2.5e-270 935.6 798 61.8
FvH4_6g46350 Fragaria vesca HOM05D003991 ORTHO05D004883 2.5e-270 935.6 800 61.8
FAN05G5440 Fragaria x ananassa HOM05D003991 ORTHO05D004883 7.2e-270 934.1 815 60.9
Lsat_1_v5_gn_3_96860 Lactuca sativa HOM05D003991 ORTHO05D004883 3.6e-269 931.8 808 61.1
FAN09G2010 Fragaria x ananassa HOM05D003991 ORTHO05D004883 7.9e-269 930.6 800 61.5
Carub.0007s3697 Capsella rubella HOM05D003991 ORTHO05D004883 1.0e-268 930.2 811 62.0
SGA_v2.0_scaffold148G36448 Striga asiatica HOM05D003991 ORTHO05D004883 3.9e-268 928.3 802 61.0
AT5G38880 Arabidopsis thaliana HOM05D003991 ORTHO05D004883 5.1e-268 927.9 812 62.1
AL7G51550 Arabidopsis lyrata HOM05D003991 ORTHO05D004883 6.7e-268 927.5 812 62.1
Lj1g0022443 Lotus japonicus HOM05D003991 ORTHO05D004883 6.7e-268 927.5 805 61.2
Duzib133G0226 Durio zibethinus HOM05D003991 ORTHO05D004883 1.1e-267 926.8 806 61.2
VMungo1383G3466 Vigna mungo HOM05D003991 ORTHO05D004883 1.1e-267 926.8 805 61.0
RcHm_v2.0_Chr2g0164851 Rosa chinensis HOM05D003991 ORTHO05D004883 5.7e-267 924.5 805 60.9
FAN14G3680 Fragaria x ananassa HOM05D003991 ORTHO05D004883 9.7e-267 923.7 814 60.4
Lalb_Chr10g0092711 Lupinus albus HOM05D003991 ORTHO05D004883 1.7e-266 922.9 806 62.5
TPR.G23393 Trifolium pratense HOM05D003991 ORTHO05D004883 2.2e-266 922.5 808 60.4
Glyma.08G251400 Glycine max HOM05D003991 ORTHO05D004883 2.8e-266 922.2 806 60.4
Nitab4.5_0000154g0150 Nicotiana tabacum HOM05D003991 ORTHO05D004883 2.8e-266 922.2 801 60.8
Phvul.008G026400 Phaseolus vulgaris HOM05D003991 ORTHO05D004883 4.8e-266 921.4 801 60.9
Glyma.18G274100 Glycine max HOM05D003991 ORTHO05D004883 6.3e-266 921.0 806 60.5
vmacro18126 Vaccinium macrocarpon HOM05D003991 ORTHO05D004883 1.1e-265 920.2 851 58.8
Hund13674 Selenicereus undatus HOM05D003991 ORTHO05D004883 9.1e-265 917.1 798 61.3
Ca_06908_v3 Cicer arietinum L. HOM05D003991 ORTHO05D004883 7.7e-264 914.1 809 60.1
Sopen03g010790 Solanum pennellii HOM05D003991 ORTHO05D004883 1.7e-263 912.9 800 60.5
MELO3C026296.2 Cucumis melo HOM05D003991 ORTHO05D004883 2.2e-263 912.5 810 60.5
HanXRQChr02g0043871 Helianthus annuus HOM05D003991 ORTHO05D004883 3.8e-263 911.8 807 60.1
Psat3g203280 Pisum sativum HOM05D003991 ORTHO05D004883 1.1e-262 910.2 807 59.4
PGR004G0075 Punica granatum HOM05D003991 ORTHO05D004883 1.1e-262 910.2 798 61.0
Cc07_g04500 Coffea canephora HOM05D003991 ORTHO05D004883 4.2e-262 908.3 812 60.8
CsaV3_4G010070 Cucumis sativus L. HOM05D003991 ORTHO05D004883 4.2e-262 908.3 812 60.2
FAN02G3988 Fragaria x ananassa HOM05D003991 ORTHO05D004883 1.6e-261 906.4 814 59.5
SalBow1G2342 Salvia bowleyana HOM05D003991 ORTHO05D004883 2.7e-261 905.6 803 60.4
EL10Ac2g04440 Beta vulgaris HOM05D003991 ORTHO05D004883 3.6e-261 905.2 818 59.5
Haze_14380 Corylus avellana HOM05D003991 ORTHO05D004883 6.1e-261 904.4 883 56.9
MSTRG.2973 Avicennia marina HOM05D003991 ORTHO05D004883 2.3e-260 902.5 803 60.6
Thhalv10027646m.g Eutrema salsugineum HOM05D003991 ORTHO05D004883 2.0e-259 899.4 812 60.6
Cpa.g.sc541.1 Carica papaya HOM05D003991 ORTHO05D004883 2.6e-259 899.0 769 62.8
Sed0026923 Sechium edule HOM05D003991 ORTHO05D004883 2.6e-259 899.0 812 59.5
Aa31LG2G3750 Aethionema arabicum HOM05D003991 ORTHO05D004883 9.7e-259 897.1 801 60.8
AUR62009479 Chenopodium quinoa HOM05D003991 ORTHO05D004883 2.2e-258 896.0 810 59.5
CAN.G427.3 Capsicum annuum HOM05D003991 ORTHO05D004883 3.7e-258 895.2 801 59.7
THA.LOC104822745 Tarenaya hassleriana HOM05D003991 ORTHO05D004883 8.2e-258 894.0 809 59.3
GSVIVG01036544001 Vitis vinifera HOM05D003991 ORTHO05D004883 7.0e-257 891.0 676 68.2
Rhsim08G0077400 Rhododendron simsii HOM05D003991 ORTHO05D004883 1.6e-256 889.8 831 58.5
Thhalv10003675m.g Eutrema salsugineum HOM05D003991 ORTHO05D004883 4.5e-256 888.3 796 59.9
arahy.Tifrunner.gnm1.ann1.YA99EJ Arachis hypogaea HOM05D003991 ORTHO05D004883 5.9e-256 887.9 791 59.8
Solyc03g046590.3 Solanum lycopersicum HOM05D003991 ORTHO05D004883 5.9e-256 887.9 800 59.1
Sabra17G0086400 Salix brachista HOM05D003991 ORTHO05D004883 1.7e-255 886.3 907 54.9
BcaC06g30850 Brassica carinata HOM05D003991 ORTHO05D004883 6.5e-255 884.4 794 59.9
Medtr7g016900 Medicago truncatula HOM05D003991 ORTHO05D004883 8.5e-255 884.0 808 58.5
Aqoxy3G03722 Aquilegia oxysepala HOM05D003991 ORTHO05D004883 9.4e-254 880.6 781 63.4
Sp2g18130 Schrenkiella parvula HOM05D003991 ORTHO05D004883 2.1e-253 879.4 797 59.1
BcaC06g33715 Brassica carinata HOM05D003991 ORTHO05D004883 1.0e-252 877.1 794 59.1
A06p39740 Brassica napus HOM05D003991 ORTHO05D004883 1.0e-252 877.1 796 58.8
BraA06t26889Z Brassica rapa HOM05D003991 ORTHO05D004883 1.0e-252 877.1 796 58.8
C07p38530 Brassica napus HOM05D003991 ORTHO05D004883 1.8e-252 876.3 794 59.1
BolC7t44375H Brassica oleracea HOM05D003991 ORTHO05D004883 1.8e-252 876.3 794 59.1
Migut.O00382 Erythranthe guttata HOM05D003991 ORTHO05D004883 3.0e-252 875.5 803 58.8
arahy.Tifrunner.gnm1.ann1.T6I3L8 Arachis hypogaea HOM05D003991 ORTHO05D004883 5.2e-252 874.8 806 59.2
ClCG07G016050 Citrullus lanatus HOM05D003991 ORTHO05D004883 6.7e-252 874.4 859 56.9
ECA246G2054 Erigeron canadensis HOM05D003991 ORTHO05D004883 6.3e-250 867.8 808 60.1
AUR62023158 Chenopodium quinoa HOM05D003991 ORTHO05D004883 8.3e-250 867.5 795 58.7
SEGI_18103 Sequoiadendron giganteum HOM05D003991 ORTHO05D004883 1.6e-248 863.2 817 56.7
HPP92_025879 Vanilla planifolia HOM05D003991 ORTHO05D004883 1.7e-247 859.8 803 57.7
Lsat_1_v5_gn_2_90201 Lactuca sativa HOM05D003991 ORTHO05D004883 4.1e-241 838.6 808 57.2
Thecc.04G106400 Theobroma cacao HOM05D003991 ORTHO05D004883 2.9e-239 832.4 650 64.8
CiPaw.04G052100 Carya illinoinensis HOM05D003991 ORTHO05D004883 2.1e-237 826.2 808 58.0
Nitab4.5_0001434g0090 Nicotiana tabacum HOM05D003991 ORTHO05D004883 1.8e-236 823.2 804 57.0
Ah.16g101030 Amaranthus hybridus HOM05D003991 ORTHO05D004883 3.0e-236 822.4 791 56.5
Gohir.D07G186400 Gossypium hirsutum HOM05D003991 ORTHO05D004883 6.8e-236 821.2 650 65.2
Gohir.A07G179600 Gossypium hirsutum HOM05D003991 ORTHO05D004883 2.0e-235 819.7 650 65.2
unitig_748.g8415 Utricularia gibba HOM05D003991 ORTHO05D004883 3.4e-235 818.9 804 56.1
C09p04400 Brassica napus HOM05D003991 ORTHO05D004883 3.5e-232 808.9 795 56.5
BraA09t36055Z Brassica rapa HOM05D003991 ORTHO05D004883 3.5e-232 808.9 793 56.1
Oeu007082.1 Olea europaea HOM05D003991 ORTHO05D004883 3.5e-232 808.9 847 53.4
BolC9t53370H Brassica oleracea HOM05D003991 ORTHO05D004883 4.0e-228 795.4 793 56.2
A09p04180 Brassica napus HOM05D003991 ORTHO05D004883 2.0e-227 793.1 794 55.3
ECA238G0416 Erigeron canadensis HOM05D003991 ORTHO05D004883 5.2e-220 768.5 799 54.3
HanXRQChr07g0200011 Helianthus annuus HOM05D003991 ORTHO05D004883 7.3e-214 748.0 833 50.4
BcaC04g23813 Brassica carinata HOM05D003991 ORTHO05D004883 2.8e-213 746.1 795 54.0
SMO147G0301 Selaginella moellendorffii HOM05D003991 ORTHO05D004883 3.3e-206 722.6 811 49.1
CSS0050035 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 1.6e-200 703.7 733 55.5
Pp3c9_9760 Physcomitrium patens HOM05D003991 ORTHO05D004883 2.0e-187 660.2 850 46.4
Pp3c9_9870 Physcomitrium patens HOM05D003991 ORTHO05D004883 2.0e-187 660.2 850 46.4
Sc11g0008820 Simmondsia chinensis HOM05D003991 ORTHO05D004883 2.0e-187 660.2 654 56.3
BcaC04g23825 Brassica carinata HOM05D003991 ORTHO05D004883 2.5e-182 643.3 640 56.2
Mapoly0016s0130 Marchantia polymorpha HOM05D003991 ORTHO05D004883 4.3e-182 642.5 875 43.4
Pp3c15_7610 Physcomitrium patens HOM05D003991 ORTHO05D004883 2.5e-174 616.7 850 44.7
AagrBONN_evm.TU.Sc2ySwM_344.1887 Anthoceros agrestis HOM05D003991 ORTHO05D004883 8.5e-162 575.1 836 41.5
Actinidia26270 Actinidia chinensis HOM05D003991 ORTHO05D004883 1.8e-159 567.4 482 63.9
Pp3c10_8720 Physcomitrium patens HOM05D003991 ORTHO05D004883 5.7e-158 562.4 657 48.1
Zm00001eb311840 Zea mays HOM05D003991 ORTHO05D004883 3.6e-152 543.1 469 60.3
Os09g0386600 Oryza sativa ssp. japonica HOM05D003991 ORTHO05D004883 5.9e-147 525.8 444 61.9
MBI17_g36999_MAGBIO Magnolia biondii HOM05D003991 ORTHO05D004883 7.2e-145 518.8 536 55.6
ECA285G0010 Erigeron canadensis HOM05D003991 ORTHO05D004883 5.3e-140 502.7 623 47.7
Zm00001eb099080 Zea mays HOM05D003991 ORTHO05D004883 2.0e-139 500.7 599 48.9
CARHR263670 Cardamine hirsuta HOM05D003991 ORTHO05D004883 3.4e-110 403.7 413 55.4
CBR_g36314 Chara braunii HOM05D003991 ORTHO05D004883 1.2e-83 315.5 766 32.0
BcaC04g23815 Brassica carinata HOM05D003991 ORTHO05D004883 7.3e-81 306.2 454 45.2
BcaB04g19523 Brassica carinata HOM05D003991 ORTHO05D004883 4.0e-79 300.4 615 35.4
arahy.Tifrunner.gnm1.ann1.VU455X Arachis hypogaea HOM05D003991 ORTHO05D004883 4.3e-65 253.8 223 57.4
Dinv33866 Davidia involucrata HOM05D003991 ORTHO05D004883 6.9e-63 246.5 215 64.2
arahy.Tifrunner.gnm1.ann1.994D9I Arachis hypogaea HOM05D003991 ORTHO05D004883 4.9e-61 240.4 198 60.6
arahy.Tifrunner.gnm1.ann1.52AFQE Arachis hypogaea HOM05D003991 ORTHO05D004883 1.4e-60 238.8 198 60.6
arahy.Tifrunner.gnm1.ann1.YE0A4T Arachis hypogaea HOM05D003991 ORTHO05D004883 1.4e-60 238.8 198 60.6
Aa31LG1G6630 Aethionema arabicum HOM05D003991 ORTHO05D004883 9.3e-60 236.1 292 48.6
Sp7g03030 Schrenkiella parvula HOM05D003991 ORTHO05D004883 3.1e-55 221.1 237 50.6
Dinv33867 Davidia involucrata HOM05D003991 ORTHO05D004883 1.5e-54 218.8 212 52.8
SMO147G0173 Selaginella moellendorffii HOM05D003991 ORTHO05D004883 3.3e-49 201.1 457 35.7
MD09G1075300 Malus domestica HOM05D003991 ORTHO05D004883 2.7e-43 181.4 122 68.9
BcaC04g23820 Brassica carinata HOM05D003991 ORTHO05D004883 3.3e-41 174.5 332 37.7
Dinv33865 Davidia involucrata HOM05D003991 ORTHO05D004883 9.1e-39 166.4 131 65.6
Sc11g0008830 Simmondsia chinensis HOM05D003991 ORTHO05D004883 9.7e-33 146.4 93 71.0
HPP92_006579 Vanilla planifolia HOM05D003991 ORTHO05D004883 1.7e-32 145.6 211 47.4
CSS0000762 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 1.4e-31 142.5 88 69.3
CSS0038698 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 1.4e-31 142.5 88 69.3
BcaC04g23819 Brassica carinata HOM05D003991 ORTHO05D004883 3.1e-31 141.4 153 51.6
SMO147G0397 Selaginella moellendorffii HOM05D003991 ORTHO05D050858 1.6e-30 139.0 166 44.0
HPP92_026595 Vanilla planifolia HOM05D003991 ORTHO05D004883 3.2e-28 131.3 130 49.2
HPP92_006533 Vanilla planifolia HOM05D003991 ORTHO05D004883 3.0e-26 124.8 361 28.8
HPP92_028494 Vanilla planifolia HOM05D003991 ORTHO05D004883 2.2e-21 108.6 157 43.9
arahy.Tifrunner.gnm1.ann1.Q8CATI Arachis hypogaea HOM05D003991 ORTHO05D004883 1.0e-18 99.8 75 65.3
BcaC04g23821 Brassica carinata HOM05D003991 ORTHO05D004883 1.4e-18 99.4 90 52.2
BcaB04g19526 Brassica carinata HOM05D003991 ORTHO05D004883 3.7e-16 91.3 74 56.8
Medtr7g008870 Medicago truncatula HOM05D003991 ORTHO05D004883 1.2e-14 86.3 72 56.9
HPP92_028205 Vanilla planifolia HOM05D003991 ORTHO05D004883 1.6e-14 85.9 130 36.9
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.3e-13 82.8 96 46.9
Cfa002005 Carpinus fangiana HOM05D003991 ORTHO05D009743 2.2e-13 82.0 57 70.2
HPP92_026824 Vanilla planifolia HOM05D003991 ORTHO05D004883 1.2e-11 76.3 109 46.8
Os11g0189900 Oryza sativa ssp. japonica HOM05D003991 ORTHO05D298446 8.0e-11 73.6 77 51.9
Dinv33864 Davidia involucrata HOM05D003991 ORTHO05D004883 1.0e-10 73.2 95 46.3
Medtr7g051850 Medicago truncatula HOM05D003991 ORTHO05D004883 3.0e-10 71.6 59 52.5
Cfa020174 Carpinus fangiana HOM05D003991 ORTHO05D004883 4.0e-10 71.2 72 52.8
HPP92_027770 Vanilla planifolia HOM05D003991 ORTHO05D432268 2.8e-08 65.1 57 57.9
QL05p023649 Quercus lobata HOM05D003991 ORTHO05D004883 9.2e-07 60.1 52 53.8
SEGI_36661 Sequoiadendron giganteum HOM05D001164 ORTHO05D018381 1.6e-06 59.3 78 47.4


User provided reference genes

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