Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1987 Ceratophyllum demersum HOM05D038143 ORTHO05D002739 6.1e-117 424.1 204 100.0
CDE02G3227 Ceratophyllum demersum HOM05D038143 ORTHO05D002739 1.2e-40 170.6 155 47.1
CDE11G0811 Ceratophyllum demersum HOM05D038143 ORTHO05D002739 1.6e-40 170.2 155 47.7
CDE06G2142 Ceratophyllum demersum HOM05D040691 ORTHO05D002739 1.2e-32 144.1 166 45.2
CDE03G0509 Ceratophyllum demersum HOM05D040691 ORTHO05D002739 6.7e-31 138.3 156 44.2
RcHm_v2.0_Chr5g0024661 Rosa chinensis HOM05D002652 ORTHO05D002739 1.0e-18 97.8 161 34.8
CARHR219080 Cardamine hirsuta HOM05D002652 ORTHO05D002739 8.5e-18 94.7 156 37.2
AT4G13440 Arabidopsis thaliana HOM05D002652 ORTHO05D002739 1.2e-16 90.9 159 35.2
CSS0002481 Camellia sinensis var. sinensis HOM05D002652 ORTHO05D002739 4.7e-16 89.0 155 34.8
COL.COLO4_15898 Corchorus olitorius HOM05D002652 ORTHO05D002739 8.0e-16 88.2 159 32.7
TAR174G0001 Trochodendron aralioides HOM05D002652 ORTHO05D002739 8.0e-16 88.2 195 29.7
Carub.0007s2911 Capsella rubella HOM05D002652 ORTHO05D002739 1.0e-15 87.8 152 34.9
Nn1g08811 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.4e-15 87.4 160 31.9
GSVIVG01027929001 Vitis vinifera HOM05D002652 ORTHO05D002739 2.3e-15 86.7 152 33.6
Actinidia39934 Actinidia chinensis HOM05D002652 ORTHO05D002739 3.0e-15 86.3 173 30.6
Aqoxy7G00431 Aquilegia oxysepala HOM05D002652 ORTHO05D002739 3.0e-15 86.3 150 34.0
Oeu020135.1 Olea europaea HOM05D002652 ORTHO05D002739 3.0e-15 86.3 152 32.2
FAN25G0267 Fragaria x ananassa HOM05D002652 ORTHO05D002739 5.2e-15 85.5 161 32.3
Rhsim02G0046300 Rhododendron simsii HOM05D002652 ORTHO05D002739 5.2e-15 85.5 143 31.5
Cfa014794 Carpinus fangiana HOM05D002652 ORTHO05D002739 8.8e-15 84.7 153 34.6
TAR365G0384 Trochodendron aralioides HOM05D002652 ORTHO05D002739 8.8e-15 84.7 161 30.4
AL9U10120 Arabidopsis lyrata HOM05D002652 ORTHO05D002739 1.5e-14 84.0 152 32.9
QL09p048788 Quercus lobata HOM05D002652 ORTHO05D002739 1.5e-14 84.0 125 35.2
SalBow3G3644 Salvia bowleyana HOM05D002652 ORTHO05D002739 1.5e-14 84.0 153 34.6
vmacro15484 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 1.5e-14 84.0 153 31.4
Nn2g14922 Nelumbo nucifera HOM05D002652 ORTHO05D002739 2.0e-14 83.6 162 30.2
Migut.G00567 Erythranthe guttata HOM05D002652 ORTHO05D002739 2.6e-14 83.2 154 33.8
FvH4_4g04740 Fragaria vesca HOM05D002652 ORTHO05D002739 2.6e-14 83.2 159 33.3
Potri.019G026820 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.6e-14 83.2 154 32.5
Oeu059391.1 Olea europaea HOM05D002652 ORTHO05D002739 3.3e-14 82.8 133 32.3
Haze_11472 Corylus avellana HOM05D002652 ORTHO05D002739 4.4e-14 82.4 141 33.3
HanXRQChr07g0194071 Helianthus annuus HOM05D002652 ORTHO05D002739 4.4e-14 82.4 163 29.4
COL.COLO4_15902 Corchorus olitorius HOM05D002652 ORTHO05D002739 5.7e-14 82.0 151 30.5
Cpa.g.sc59.9 Carica papaya HOM05D002652 ORTHO05D002739 7.5e-14 81.6 152 33.6
QL06p021327 Quercus lobata HOM05D002652 ORTHO05D002739 7.5e-14 81.6 155 32.3
SalBow2G0549 Salvia bowleyana HOM05D002652 ORTHO05D002739 7.5e-14 81.6 165 30.9
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 9.7e-14 81.3 155 32.3
FAN12G2993 Fragaria x ananassa HOM05D002652 ORTHO05D002739 9.7e-14 81.3 164 34.1
QL09p048770 Quercus lobata HOM05D002652 ORTHO05D002739 9.7e-14 81.3 152 31.6
THA.LOC104821630 Tarenaya hassleriana HOM05D002652 ORTHO05D002739 9.7e-14 81.3 152 31.6
BcaB07g30971 Brassica carinata HOM05D002652 ORTHO05D002739 1.3e-13 80.9 154 33.8
Cfa021216 Carpinus fangiana HOM05D002652 ORTHO05D002739 1.3e-13 80.9 125 36.8
Rhsim02G0044400 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.3e-13 80.9 143 30.1
Rhsim02G0046500 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.3e-13 80.9 143 30.1
Duzib151G0030 Durio zibethinus HOM05D002652 ORTHO05D002739 1.7e-13 80.5 157 33.8
Manes.15G046400 Manihot esculenta HOM05D002652 ORTHO05D002739 1.7e-13 80.5 158 32.3
Potri.T121000 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.7e-13 80.5 163 26.4
QL08p018841 Quercus lobata HOM05D002652 ORTHO05D002739 1.7e-13 80.5 155 32.3
FvH4_4g04980 Fragaria vesca HOM05D002652 ORTHO05D002739 2.2e-13 80.1 155 32.9
Rhsim02G0047200 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.2e-13 80.1 156 31.4
Aa31LG9G4210 Aethionema arabicum HOM05D002652 ORTHO05D002739 2.8e-13 79.7 160 30.6
Cpa.g.sc8968.1 Carica papaya HOM05D002652 ORTHO05D002739 2.8e-13 79.7 149 33.6
Rhsim02G0045100 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.8e-13 79.7 152 31.6
MSTRG.4179 Avicennia marina HOM05D002652 ORTHO05D002739 3.7e-13 79.3 158 30.4
FAN17G3082 Fragaria x ananassa HOM05D002652 ORTHO05D002739 3.7e-13 79.3 164 32.3
RhsimUnG0058100 Rhododendron simsii HOM05D002652 ORTHO05D002739 3.7e-13 79.3 151 30.5
Aa31LG9G4200 Aethionema arabicum HOM05D002652 ORTHO05D002739 4.8e-13 79.0 163 28.8
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 4.8e-13 79.0 155 32.9
Potri.019G029100 Populus trichocarpa HOM05D002652 ORTHO05D002739 4.8e-13 79.0 161 32.3
QL09p048410 Quercus lobata HOM05D002652 ORTHO05D002739 4.8e-13 79.0 155 33.5
COL.COLO4_15907 Corchorus olitorius HOM05D002652 ORTHO05D002739 6.3e-13 78.6 151 29.8
BcaC04g21865 Brassica carinata HOM05D002652 ORTHO05D002739 8.2e-13 78.2 153 32.7
BolC9t55542H Brassica oleracea HOM05D002652 ORTHO05D002739 8.2e-13 78.2 153 32.7
ECA238G3361 Erigeron canadensis HOM05D000095 ORTHO05D002739 8.2e-13 78.2 166 29.5
vmacro15483 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 8.2e-13 78.2 156 32.1
Aa31LG7G1800 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.1e-12 77.8 152 32.2
CiPaw.02G106000 Carya illinoinensis HOM05D002652 ORTHO05D002739 1.1e-12 77.8 158 32.9
RhsimUnG0058300 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.1e-12 77.8 149 30.9
Sabra19G0038400 Salix brachista HOM05D002652 ORTHO05D002739 1.1e-12 77.8 142 29.6
SalBow2G1631 Salvia bowleyana HOM05D002652 ORTHO05D002739 1.1e-12 77.8 162 29.6
Rhsim02G0044800 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.4e-12 77.4 159 30.8
RhsimUnG0101000 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.4e-12 77.4 152 31.6
Prupe.1G050000 Prunus persica HOM05D002652 ORTHO05D002739 1.8e-12 77.0 157 29.9
ECA247G3161 Erigeron canadensis HOM05D002652 ORTHO05D002739 2.4e-12 76.6 150 29.3
Prupe.1G049600 Prunus persica HOM05D002652 ORTHO05D002739 3.1e-12 76.3 157 32.5
QL09p048820 Quercus lobata HOM05D002652 ORTHO05D002739 3.1e-12 76.3 155 31.6
Atru.chr4.1903 Acer truncatum HOM05D002652 ORTHO05D002739 4.1e-12 75.9 152 30.9
Aa31LG9G4240 Aethionema arabicum HOM05D002652 ORTHO05D002739 4.1e-12 75.9 157 31.2
Migut.N00313 Erythranthe guttata HOM05D002652 ORTHO05D002739 4.1e-12 75.9 144 29.2
Prupe.4G134500 Prunus persica HOM05D002652 ORTHO05D002739 4.1e-12 75.9 158 31.6
Potri.019G029000 Populus trichocarpa HOM05D002652 ORTHO05D002739 5.3e-12 75.5 149 34.9
RhsimUnG0195300 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.2e-11 74.3 165 27.9
C09p26400 Brassica napus HOM05D002652 ORTHO05D002739 1.6e-11 73.9 153 32.0
Duzib151G0998 Durio zibethinus HOM05D002652 ORTHO05D002739 1.6e-11 73.9 153 28.8
FAN10G1323 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.6e-11 73.9 164 32.9
FAN10G2095 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.6e-11 73.9 164 32.9
Potri.019G026900 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.6e-11 73.9 150 30.0
Potri.019G027100 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.6e-11 73.9 150 30.0
Potri.019G028800 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.6e-11 73.9 151 29.8
Nn1g00661 Nelumbo nucifera HOM05D002652 ORTHO05D002739 2.7e-11 73.2 144 35.4
SalBow2G2144 Salvia bowleyana HOM05D000062 ORTHO05D000043 3.5e-11 72.8 161 29.2
Rhsim02G0046000 Rhododendron simsii HOM05D002652 ORTHO05D002739 4.5e-11 72.4 163 29.4
CiPaw.01G177100 Carya illinoinensis HOM05D002652 ORTHO05D002739 7.7e-11 71.6 153 30.1
Sabra19G0039000 Salix brachista HOM05D002652 ORTHO05D002739 7.7e-11 71.6 152 29.6
Duzib147G0896 Durio zibethinus HOM05D002652 ORTHO05D002739 1.0e-10 71.2 158 31.0
Rhsim02G0047400 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.0e-10 71.2 152 31.6
Nn5g27876 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.3e-10 70.9 161 26.1
Potri.019G026860 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.3e-10 70.9 149 32.2
DCAR_002582 Daucus carota HOM05D002652 ORTHO05D002739 1.7e-10 70.5 153 28.1
Manes.03G158000 Manihot esculenta HOM05D002652 ORTHO05D002739 2.9e-10 69.7 158 27.2
Potri.019G027000 Populus trichocarpa HOM05D002652 ORTHO05D002739 3.8e-10 69.3 150 29.3
Rhsim02G0046100 Rhododendron simsii HOM05D002652 ORTHO05D002739 3.8e-10 69.3 165 28.5
Oeu011205.1 Olea europaea HOM05D002652 ORTHO05D002739 8.5e-10 68.2 152 28.3
Nn1g00658 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.1e-09 67.8 153 26.8
Potri.019G026740 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.1e-09 67.8 151 27.8
FvH4_4g04850 Fragaria vesca HOM05D002652 ORTHO05D002739 1.5e-09 67.4 161 27.3
FAN12G2048 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.5e-09 67.4 161 27.3
Eucgr.F02935 Eucalyptus grandis HOM05D002652 ORTHO05D002739 1.9e-09 67.0 96 34.4
Nn1g00655 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.9e-09 67.0 153 26.8
Nn1g00660 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.9e-09 67.0 153 26.8
Potri.019G026780 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.5e-09 66.6 157 30.6
FAN16G2437 Fragaria x ananassa HOM05D002652 ORTHO05D002739 3.2e-09 66.2 159 30.2
Nn1g06038 Nelumbo nucifera HOM05D002652 ORTHO05D002739 3.2e-09 66.2 137 27.7
RcHm_v2.0_Chr5g0024631 Rosa chinensis HOM05D002652 ORTHO05D002739 3.2e-09 66.2 159 30.2
Sabra19G0035700 Salix brachista HOM05D002652 ORTHO05D002739 3.2e-09 66.2 152 28.9
FAN11G1518 Fragaria x ananassa HOM05D002652 ORTHO05D002739 4.2e-09 65.9 159 30.2
Eucgr.F02936 Eucalyptus grandis HOM05D002652 ORTHO05D002739 5.5e-09 65.5 140 27.9
FAN21G1568 Fragaria x ananassa HOM05D002652 ORTHO05D002739 5.5e-09 65.5 162 29.6
Potri.019G027200 Populus trichocarpa HOM05D002652 ORTHO05D002739 5.5e-09 65.5 146 30.1
Nn1g00657 Nelumbo nucifera HOM05D002652 ORTHO05D002739 9.4e-09 64.7 152 29.6
RcHm_v2.0_Chr4g0397571 Rosa chinensis HOM05D002652 ORTHO05D002739 1.2e-08 64.3 161 28.6
FvH4_3g15000 Fragaria vesca HOM05D002652 ORTHO05D002739 1.6e-08 63.9 159 29.6
Hma1.2p1_0042F.1_g025730 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 3.6e-08 62.8 151 27.2
Migut.N00315 Erythranthe guttata HOM05D002652 ORTHO05D002739 4.7e-08 62.4 92 34.8
RcHm_v2.0_Chr4g0395551 Rosa chinensis HOM05D002652 ORTHO05D002739 4.7e-08 62.4 160 26.2
Oeu011207.1 Olea europaea HOM05D002652 ORTHO05D002739 6.1e-08 62.0 146 28.8
QL09p048859 Quercus lobata HOM05D002652 ORTHO05D002739 8.0e-08 61.6 149 29.5
PGR044G0888 Punica granatum HOM05D002652 ORTHO05D002739 2.3e-07 60.1 90 32.2
Migut.N00883 Erythranthe guttata HOM05D002652 ORTHO05D002739 8.8e-07 58.2 139 27.3
FvH4_3g15020 Fragaria vesca HOM05D002652 ORTHO05D002739 1.2e-06 57.8 168 26.2
MD05G1228500 Malus domestica HOM05D002652 ORTHO05D002739 1.5e-06 57.4 141 29.8
COL.COLO4_15908 Corchorus olitorius HOM05D002652 ORTHO05D002739 2.6e-06 56.6 149 28.9
Migut.N00889 Erythranthe guttata HOM05D002652 ORTHO05D002739 2.6e-06 56.6 149 25.5
Migut.N00886 Erythranthe guttata HOM05D002652 ORTHO05D002739 4.4e-06 55.8 155 26.5


User provided reference genes

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