Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 0.0e+00 2033.8 1006 100.0
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 8.9e-201 704.9 1049 43.7
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 6.4e-191 672.2 1039 42.3
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 8.1e-186 655.2 1032 41.4
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 5.2e-185 652.5 1072 40.4
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 5.2e-185 652.5 1033 40.9
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 2.6e-184 650.2 1033 40.8
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 9.8e-184 648.3 1140 40.6
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 3.7e-183 646.4 1073 40.3
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 6.4e-183 645.6 1066 41.2
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 2.4e-182 643.7 1072 40.5
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 3.2e-182 643.3 1047 40.1
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 5.4e-182 642.5 1095 40.1
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 2.5e-179 633.6 1094 39.5
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 5.6e-179 632.5 1133 38.9
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 1.6e-178 630.9 1015 41.1
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 1.1e-177 628.2 1094 39.2
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 6.8e-177 625.5 1116 39.2
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 2.0e-176 624.0 1079 39.4
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 2.0e-176 624.0 1063 40.0
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.6e-176 623.6 1092 39.7
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 4.4e-176 622.9 1079 40.4
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 5.8e-176 622.5 1088 39.4
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 2.2e-175 620.5 1055 39.8
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 5.4e-174 615.9 1102 39.0
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 2.3e-172 610.5 1056 38.8
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 8.6e-172 608.6 1086 37.6
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.9e-171 607.4 913 42.3
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 3.3e-171 606.7 954 41.0
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 3.3e-171 606.7 1117 38.7
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 9.6e-171 605.1 957 40.9
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.4e-169 600.5 1178 37.2
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 5.2e-169 599.4 1067 39.3
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 8.9e-169 598.6 503 60.6
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.5e-168 597.8 1137 37.3
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 2.0e-168 597.4 1118 36.9
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 5.8e-168 595.9 1113 39.2
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 3.8e-167 593.2 1047 38.4
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 3.8e-167 593.2 1004 39.6
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.4e-166 591.3 813 43.8
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.2e-165 588.2 521 58.3
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 3.5e-165 586.6 1029 39.7
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 7.8e-165 585.5 1016 40.2
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 1.0e-164 585.1 1063 38.3
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 1.3e-164 584.7 1060 37.6
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 1.7e-164 584.3 1085 37.2
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 6.6e-164 582.4 1075 39.4
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 4.3e-163 579.7 996 38.8
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 4.3e-163 579.7 772 45.5
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 5.6e-163 579.3 1072 38.8
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 7.3e-163 578.9 1012 39.2
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 2.8e-162 577.0 1008 39.7
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 3.6e-162 576.6 1045 39.5
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 1.4e-161 574.7 1066 37.1
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.4e-161 573.9 1029 38.1
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 3.1e-161 573.5 1034 37.6
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 3.1e-161 573.5 1033 38.1
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.2e-160 571.6 1031 40.3
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 1.2e-160 571.6 1084 37.8
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 5.8e-160 569.3 509 57.0
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 9.9e-160 568.5 1050 38.7
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 8.4e-159 565.5 1036 39.1
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 3.2e-158 563.5 484 59.5
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 3.2e-158 563.5 497 57.3
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 2.1e-157 560.8 492 58.1
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 2.1e-157 560.8 1025 39.2
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 2.7e-157 560.5 1064 36.5
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 3.5e-157 560.1 997 37.8
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 6.0e-157 559.3 1051 37.3
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 1.0e-156 558.5 1052 38.0
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 1.3e-156 558.1 1008 39.0
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 1.3e-156 558.1 1004 40.0
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 2.3e-156 557.4 837 41.5
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 1.1e-155 555.1 1101 36.8
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 1.1e-155 555.1 817 41.6
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 1.5e-155 554.7 512 56.1
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 1.5e-155 554.7 508 57.1
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 2.5e-155 553.9 501 56.1
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 4.3e-155 553.1 501 56.1
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 5.6e-155 552.7 598 50.8
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 3.6e-154 550.1 1041 38.1
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 8.1e-154 548.9 984 38.0
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 1.1e-153 548.5 1046 38.6
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 2.4e-153 547.4 985 38.0
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 5.3e-153 546.2 503 55.7
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 1.2e-152 545.0 750 43.1
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 3.4e-152 543.5 1046 36.4
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.2e-151 540.8 995 37.4
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.9e-150 537.7 507 55.2
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 1.9e-150 537.7 1005 38.2
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 9.3e-150 535.4 977 39.3
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 1.6e-149 534.6 1033 37.8
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.1e-149 534.3 1000 36.6
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 7.4e-147 525.8 1102 36.0
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 4.8e-146 523.1 973 39.3
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 4.2e-142 510.0 852 38.8
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 2.1e-141 507.7 992 35.3
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 2.6e-128 464.2 424 57.1
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.0e-119 435.6 916 37.0
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.7e-119 434.9 1049 33.9
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 2.2e-119 434.5 714 40.1
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 4.4e-115 420.2 541 44.5
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 9.7e-115 419.1 764 39.8
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 7.2e-110 402.9 881 34.1
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 3.3e-107 394.0 494 42.5
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 1.1e-105 389.0 553 41.2
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 9.1e-105 386.0 459 47.9
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 4.5e-104 383.6 729 34.8
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 1.4e-100 372.1 274 62.0
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.2e-96 359.0 346 54.6
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 4.5e-96 357.1 908 33.7
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.8e-92 345.1 909 33.3
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.9e-82 310.5 893 31.7
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 7.5e-67 260.0 638 31.5
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 2.2e-58 231.9 149 69.8
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 6.6e-55 220.3 194 57.7
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 1.8e-52 212.2 760 31.4
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 8.7e-47 193.4 672 32.1
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 1.2e-40 172.9 670 27.9
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 7.2e-17 94.0 80 58.8
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 6.1e-16 90.9 196 32.1
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 1.4e-12 79.7 57 57.9
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 2.4e-12 79.0 73 49.3
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 4.1e-12 78.2 55 58.2
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 6.9e-12 77.4 49 65.3
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 3.4e-11 75.1 77 44.2
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 4.5e-11 74.7 49 65.3
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 5.0e-10 71.2 311 28.0
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.1e-09 70.1 56 60.7
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 1.1e-09 70.1 108 43.5
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 5.1e-07 61.2 352 25.0


User provided reference genes

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