Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1782 Ceratophyllum demersum HOM05D001749 ORTHO05D001632 1.2e-89 333.2 176 100.0
CDE02G3540 Ceratophyllum demersum HOM05D001749 ORTHO05D001632 9.4e-74 280.4 169 88.2
Nn5g29676 Nelumbo nucifera HOM05D001749 ORTHO05D001632 5.6e-18 95.1 173 39.9
Gohir.A11G182600 Gossypium hirsutum HOM05D001749 ORTHO05D001632 1.7e-14 83.6 173 38.2
Nn1g04912 Nelumbo nucifera HOM05D001749 ORTHO05D001632 2.2e-14 83.2 178 39.3
Gohir.D11G189200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 8.4e-14 81.3 173 37.0
TAR628G1444 Trochodendron aralioides HOM05D001749 ORTHO05D001632 8.4e-14 81.3 182 39.6
ClCG11G004240 Citrullus lanatus HOM05D001749 ORTHO05D001632 1.9e-13 80.1 163 36.8
Gorai.007G201500 Gossypium raimondii HOM05D001749 ORTHO05D001632 1.9e-13 80.1 173 37.0
MBI10_g06727_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 1.9e-13 80.1 177 39.5
MELO3C023313.2 Cucumis melo HOM05D001749 ORTHO05D001632 2.4e-13 79.7 166 39.8
CsaV3_2G014930 Cucumis sativus L. HOM05D001749 ORTHO05D001632 2.4e-13 79.7 167 37.1
Thecc.01G031200 Theobroma cacao HOM05D001749 ORTHO05D001632 9.3e-13 77.8 181 37.0
TAR381G0807 Trochodendron aralioides HOM05D001749 ORTHO05D001632 1.6e-12 77.0 175 36.6
Nitab4.5_0000344g0170 Nicotiana tabacum HOM05D001749 ORTHO05D001632 7.9e-12 74.7 184 32.6
Nitab4.5_0011923g0020 Nicotiana tabacum HOM05D001749 ORTHO05D001632 7.9e-12 74.7 187 34.2
Actinidia19200 Actinidia chinensis HOM05D001749 ORTHO05D001632 1.3e-11 73.9 178 34.8
Gohir.D12G063200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 1.3e-11 73.9 171 36.8
Gorai.008G066400 Gossypium raimondii HOM05D001749 ORTHO05D001632 1.3e-11 73.9 175 36.6
Manes.02G096700 Manihot esculenta HOM05D001749 ORTHO05D001632 1.8e-11 73.6 200 33.5
Dinv13495 Davidia involucrata HOM05D001749 ORTHO05D001632 3.9e-11 72.4 187 35.3
MBI16_g08780_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 6.7e-11 71.6 174 37.4
QL11p044367 Quercus lobata HOM05D001749 ORTHO05D001632 6.7e-11 71.6 163 36.8
CDE05G0151 Ceratophyllum demersum HOM05D001749 ORTHO05D001632 8.7e-11 71.2 180 36.1
Gohir.A12G063300 Gossypium hirsutum HOM05D001749 ORTHO05D001632 1.1e-10 70.9 186 34.4
Hma1.2p1_0224F.1_g094445 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 1.5e-10 70.5 173 35.3
Hma1.2p1_2993F.1_g331370 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 1.5e-10 70.5 173 35.3
MBI16_g30353_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 1.5e-10 70.5 166 37.3
Aqoxy6G01165 Aquilegia oxysepala HOM05D001749 ORTHO05D001632 1.9e-10 70.1 189 33.9
Duzib147G1275 Durio zibethinus HOM05D001749 ORTHO05D001632 1.9e-10 70.1 190 36.3
VMungo0251G1101 Vigna mungo HOM05D001749 ORTHO05D001632 1.9e-10 70.1 176 34.7
Ah.03g141140 Amaranthus hybridus HOM05D001749 ORTHO05D001632 2.5e-10 69.7 176 35.2
Aqoxy5G01581 Aquilegia oxysepala HOM05D001749 ORTHO05D001632 2.5e-10 69.7 195 32.3
Cc07_g09890 Coffea canephora HOM05D001749 ORTHO05D001632 2.5e-10 69.7 192 33.3
AT5G66440 Arabidopsis thaliana HOM05D001749 ORTHO05D001632 3.3e-10 69.3 187 28.9
Cfa004342 Carpinus fangiana HOM05D001749 ORTHO05D001632 3.3e-10 69.3 186 36.6
CiPaw.06G133800 Carya illinoinensis HOM05D001749 ORTHO05D001632 7.4e-10 68.2 169 33.7
TAR625G0803 Trochodendron aralioides HOM05D001749 ORTHO05D001632 7.4e-10 68.2 174 37.9
QL06p047145 Quercus lobata HOM05D001749 ORTHO05D001632 9.6e-10 67.8 178 33.7
Cfa005035 Carpinus fangiana HOM05D001749 ORTHO05D001632 1.3e-09 67.4 163 36.8
PSO541G5621 Papaver somniferum HOM05D001749 ORTHO05D001632 1.3e-09 67.4 200 34.5
Potri.004G157300 Populus trichocarpa HOM05D001749 ORTHO05D001632 1.3e-09 67.4 170 35.9
Nitab4.5_0001617g0020 Nicotiana tabacum HOM05D001749 ORTHO05D001632 1.6e-09 67.0 190 35.3
Nitab4.5_0003001g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 1.6e-09 67.0 190 35.3
Haze_02352 Corylus avellana HOM05D001749 ORTHO05D001632 2.1e-09 66.6 166 38.6
Sopen03g006620 Solanum pennellii HOM05D001749 ORTHO05D001632 2.1e-09 66.6 184 32.6
MSTRG.5404 Avicennia marina HOM05D001749 ORTHO05D001632 2.8e-09 66.2 167 32.9
Haze_02350 Corylus avellana HOM05D001749 ORTHO05D001632 2.8e-09 66.2 164 36.6
Atru.chr5.3055 Acer truncatum HOM05D001749 ORTHO05D001632 3.7e-09 65.9 168 32.7
PGR142G0388 Punica granatum HOM05D001749 ORTHO05D001632 3.7e-09 65.9 163 35.0
EL10As8g23912 Beta vulgaris HOM05D001749 ORTHO05D001632 4.8e-09 65.5 190 33.2
CiPaw.02G020500 Carya illinoinensis HOM05D001749 ORTHO05D001632 4.8e-09 65.5 188 34.6
Duzib187G2007 Durio zibethinus HOM05D001749 ORTHO05D001632 4.8e-09 65.5 177 34.5
Hma1.2p1_0066F.1_g036220 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 4.8e-09 65.5 163 32.5
ClCG07G008620 Citrullus lanatus HOM05D001749 ORTHO05D001632 8.1e-09 64.7 174 32.8
Haze_15059 Corylus avellana HOM05D001749 ORTHO05D001632 8.1e-09 64.7 186 34.9
Eucgr.I01283 Eucalyptus grandis HOM05D001749 ORTHO05D001632 8.1e-09 64.7 163 32.5
Solyc03g033860.1 Solanum lycopersicum HOM05D001749 ORTHO05D001632 8.1e-09 64.7 184 32.1
Gorai.011G100900 Gossypium raimondii HOM05D001749 ORTHO05D001632 1.1e-08 64.3 173 35.8
PSO675G0347 Papaver somniferum HOM05D001749 ORTHO05D001632 1.1e-08 64.3 202 33.7
Sc03g0003140 Simmondsia chinensis HOM05D001749 ORTHO05D001632 1.1e-08 64.3 173 35.3
Cpa.g.sc1139.1 Carica papaya HOM05D001749 ORTHO05D001632 1.4e-08 63.9 187 31.6
Cfa005037 Carpinus fangiana HOM05D001749 ORTHO05D001632 1.8e-08 63.5 164 36.0
CARHR281310 Cardamine hirsuta HOM05D001749 ORTHO05D001632 2.4e-08 63.2 192 28.6
AUR62004089 Chenopodium quinoa HOM05D001749 ORTHO05D001632 2.4e-08 63.2 193 29.5
Prupe.8G094100 Prunus persica HOM05D001749 ORTHO05D001632 2.4e-08 63.2 167 35.3
Manes.11G085200 Manihot esculenta HOM05D001749 ORTHO05D001632 3.1e-08 62.8 163 33.7
Manes.04G074762 Manihot esculenta HOM05D001749 ORTHO05D001632 4.0e-08 62.4 166 35.5
Potri.009G119000 Populus trichocarpa HOM05D001749 ORTHO05D001632 4.0e-08 62.4 166 36.7
Sp2g30290 Schrenkiella parvula HOM05D001749 ORTHO05D001632 4.0e-08 62.4 182 33.0
THA.LOC104819615 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 5.3e-08 62.0 164 32.3
C07p25470 Brassica napus HOM05D001749 ORTHO05D001632 6.9e-08 61.6 181 31.5
CiPaw.06G133900 Carya illinoinensis HOM05D001749 ORTHO05D001632 6.9e-08 61.6 163 35.0
COL.COLO4_25968 Corchorus olitorius HOM05D001749 ORTHO05D001632 6.9e-08 61.6 166 33.1
Gohir.A10G096200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 6.9e-08 61.6 177 35.0
Gohir.D10G091900 Gossypium hirsutum HOM05D001749 ORTHO05D001632 6.9e-08 61.6 173 35.3
MD02G1143400 Malus domestica HOM05D001749 ORTHO05D001632 6.9e-08 61.6 185 33.0
PGSC0003DMG400003523 Solanum tuberosum HOM05D001749 ORTHO05D001632 6.9e-08 61.6 190 31.1
PGSC0003DMG400022575 Solanum tuberosum HOM05D001749 ORTHO05D001632 6.9e-08 61.6 186 31.2
THA.LOC104826664 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 6.9e-08 61.6 189 30.7
Sopen02g029630 Solanum pennellii HOM05D001749 ORTHO05D001632 9.0e-08 61.2 190 31.1
Duzib248G0723 Durio zibethinus HOM05D001749 ORTHO05D001632 1.2e-07 60.8 167 33.5
HanXRQChr09g0261391 Helianthus annuus HOM05D001749 ORTHO05D001632 1.2e-07 60.8 198 28.3
PGR119G0350 Punica granatum HOM05D001749 ORTHO05D001632 1.2e-07 60.8 201 30.3
BcaB02g10030 Brassica carinata HOM05D001749 ORTHO05D001632 1.5e-07 60.5 190 28.4
CANSAT01G2116 Cannabis sativa HOM05D001749 ORTHO05D001632 2.0e-07 60.1 178 31.5
COL.COLO4_22034 Corchorus olitorius HOM05D001749 ORTHO05D001632 2.0e-07 60.1 178 33.7
Solyc02g084960.1 Solanum lycopersicum HOM05D001749 ORTHO05D001632 2.6e-07 59.7 185 30.8
Haze_02351 Corylus avellana HOM05D001749 ORTHO05D001632 3.4e-07 59.3 164 36.0
Gohir.D13G031200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 3.4e-07 59.3 176 30.7
Nitab4.5_0002828g0160 Nicotiana tabacum HOM05D001749 ORTHO05D001632 3.4e-07 59.3 142 33.8
RcHm_v2.0_Chr6g0265051 Rosa chinensis HOM05D001749 ORTHO05D001632 3.4e-07 59.3 168 35.7
EL10Ac9g21701 Beta vulgaris HOM05D001749 ORTHO05D001632 4.5e-07 58.9 168 31.5
A07p17520 Brassica napus HOM05D001749 ORTHO05D001632 4.5e-07 58.9 179 31.8
BraA07t29472Z Brassica rapa HOM05D001749 ORTHO05D001632 4.5e-07 58.9 179 31.8
Thhalv10010637m.g Eutrema salsugineum HOM05D001749 ORTHO05D001632 4.5e-07 58.9 203 30.0
Gohir.A13G033300 Gossypium hirsutum HOM05D001749 ORTHO05D001632 5.8e-07 58.5 170 31.2
Aa31LG1G14960 Aethionema arabicum HOM05D001749 ORTHO05D001632 7.6e-07 58.2 183 30.1
ATR0568G223 Amborella trichopoda HOM05D001749 ORTHO05D001632 7.6e-07 58.2 191 31.9
Gorai.013G035600 Gossypium raimondii HOM05D001749 ORTHO05D001632 7.6e-07 58.2 176 30.7
HanXRQChr11g0325491 Helianthus annuus HOM05D001749 ORTHO05D001632 7.6e-07 58.2 194 30.9
Oeu023336.1 Olea europaea HOM05D001749 ORTHO05D001632 7.6e-07 58.2 184 29.9
RcHm_v2.0_Chr2g0100901 Rosa chinensis HOM05D001749 ORTHO05D001632 7.6e-07 58.2 197 35.5
Sabra04G0105300 Salix brachista HOM05D001749 ORTHO05D001632 7.6e-07 58.2 183 30.6
CSS0042795 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 9.9e-07 57.8 173 30.1
Dinv40015 Davidia involucrata HOM05D001749 ORTHO05D001632 9.9e-07 57.8 176 31.2
Glyma.16G134800 Glycine max HOM05D001749 ORTHO05D001632 9.9e-07 57.8 175 33.7
BcaC06g34702 Brassica carinata HOM05D001749 ORTHO05D001632 1.3e-06 57.4 182 30.8
FAN28G1045 Fragaria x ananassa HOM05D001749 ORTHO05D001632 1.3e-06 57.4 193 35.2
Sabra09G0091300 Salix brachista HOM05D001749 ORTHO05D001632 1.3e-06 57.4 165 35.8
THA.LOC104818171 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 1.3e-06 57.4 182 29.7
THA.LOC104819200 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 1.3e-06 57.4 196 30.6
Thecc.02G082100 Theobroma cacao HOM05D001749 ORTHO05D001632 1.3e-06 57.4 180 32.8
Ca_22298_v3 Cicer arietinum L. HOM05D001749 ORTHO05D001632 1.7e-06 57.0 182 29.7
Ca_22328_v3 Cicer arietinum L. HOM05D001749 ORTHO05D001632 1.7e-06 57.0 182 29.7
Migut.H02524 Erythranthe guttata HOM05D001749 ORTHO05D001632 1.7e-06 57.0 181 32.6
Thhalv10004766m.g Eutrema salsugineum HOM05D001749 ORTHO05D001632 1.7e-06 57.0 203 29.1
TWI79G0729 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 1.7e-06 57.0 162 32.7
CAN.G358.46 Capsicum annuum HOM05D001749 ORTHO05D001632 2.2e-06 56.6 199 27.6
CiPaw.05G066900 Carya illinoinensis HOM05D001749 ORTHO05D001632 2.2e-06 56.6 163 33.7
ECA232G4251 Erigeron canadensis HOM05D001749 ORTHO05D001632 2.2e-06 56.6 196 31.1
FAN27G1258 Fragaria x ananassa HOM05D001749 ORTHO05D001632 2.2e-06 56.6 167 30.5
PSO832G2070 Papaver somniferum HOM05D001749 ORTHO05D001632 2.2e-06 56.6 186 29.6
BolC7t43068H Brassica oleracea HOM05D001749 ORTHO05D001632 2.9e-06 56.2 182 30.2
Carub.0008s2808 Capsella rubella HOM05D001749 ORTHO05D001632 3.8e-06 55.8 182 29.1
AUR62016762 Chenopodium quinoa HOM05D006463 ORTHO05D002997 3.8e-06 55.8 169 29.6
CsaV3_6G046480 Cucumis sativus L. HOM05D001749 ORTHO05D001632 3.8e-06 55.8 191 30.4
THA.LOC104807305 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 3.8e-06 55.8 164 34.8
TPR.G14237 Trifolium pratense HOM05D001749 ORTHO05D001632 3.8e-06 55.8 180 30.0
BcaNung05716 Brassica carinata HOM05D001749 ORTHO05D001632 4.9e-06 55.5 179 30.2
Ciclev10029211m.g Citrus clementina HOM05D001749 ORTHO05D001632 4.9e-06 55.5 165 33.3
Duzib132G0910 Durio zibethinus HOM05D001749 ORTHO05D001632 4.9e-06 55.5 174 32.2
FvH4_2g09200 Fragaria vesca HOM05D001749 ORTHO05D001632 4.9e-06 55.5 164 30.5
FAN15G1825 Fragaria x ananassa HOM05D001749 ORTHO05D001632 4.9e-06 55.5 164 30.5
Glyma.04G011000 Glycine max HOM05D001749 ORTHO05D001632 4.9e-06 55.5 164 32.9
MD05G1064000 Malus domestica HOM05D001749 ORTHO05D001632 4.9e-06 55.5 173 31.8
AUR62007601 Chenopodium quinoa HOM05D001749 ORTHO05D001632 6.4e-06 55.1 202 30.7
CsaV3_4G005530 Cucumis sativus L. HOM05D001749 ORTHO05D001632 6.4e-06 55.1 180 28.9
FAN24G3069 Fragaria x ananassa HOM05D001749 ORTHO05D001632 6.4e-06 55.1 164 32.3
TWI73G0715 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 6.4e-06 55.1 190 30.0
CDE11G0791 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 8.4e-06 54.7 173 32.4
FAN26G1634 Fragaria x ananassa HOM05D001749 ORTHO05D001632 8.4e-06 54.7 175 32.0
Phvul.003G255700 Phaseolus vulgaris HOM05D001749 ORTHO05D001632 8.4e-06 54.7 174 34.5


User provided reference genes

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