Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 4.0e-57 224.6 116 100.0
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 1.2e-19 100.1 114 50.0
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 2.0e-19 99.4 89 52.8
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 4.4e-19 98.2 89 52.8
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 5.7e-19 97.8 104 48.1
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 7.5e-19 97.4 89 51.7
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.3e-18 96.7 89 50.6
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 3.7e-18 95.1 114 46.5
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 4.8e-18 94.7 105 50.5
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 4.8e-18 94.7 118 44.9
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 1.1e-17 93.6 106 47.2
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 1.4e-17 93.2 108 46.3
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 1.4e-17 93.2 120 48.3
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 1.4e-17 93.2 106 49.1
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 1.8e-17 92.8 105 46.7
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 2.4e-17 92.4 84 54.8
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 4.1e-17 91.7 107 45.8
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 9.1e-17 90.5 83 54.2
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 9.1e-17 90.5 107 48.6
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 1.2e-16 90.1 107 46.7
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 1.6e-16 89.7 114 44.7
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 1.6e-16 89.7 81 53.1
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 2.0e-16 89.4 89 51.7
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 2.0e-16 89.4 106 47.2
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 3.5e-16 88.6 106 46.2
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 4.5e-16 88.2 114 40.4
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 7.7e-16 87.4 108 47.2
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 1.3e-15 86.7 106 46.2
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 1.3e-15 86.7 107 43.9
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 1.7e-15 86.3 106 43.4
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 2.2e-15 85.9 82 48.8
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 2.2e-15 85.9 113 42.5
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 2.9e-15 85.5 105 41.0
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 2.9e-15 85.5 105 42.9
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 3.8e-15 85.1 99 45.5
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 3.8e-15 85.1 91 51.6
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 3.8e-15 85.1 105 43.8
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 5.0e-15 84.7 97 44.3
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 1.1e-14 83.6 115 43.5
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 1.1e-14 83.6 120 43.3
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 1.5e-14 83.2 115 41.7
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 1.9e-14 82.8 107 46.7
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.9e-14 82.8 82 47.6
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 1.9e-14 82.8 115 42.6
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 1.9e-14 82.8 116 43.1
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 2.5e-14 82.4 107 44.9
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 2.5e-14 82.4 121 40.5
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 2.5e-14 82.4 81 50.6
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 3.2e-14 82.0 93 48.4
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 3.2e-14 82.0 107 44.9
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 3.2e-14 82.0 81 45.7
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 4.2e-14 81.6 107 45.8
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 4.2e-14 81.6 106 42.5
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 4.2e-14 81.6 83 45.8
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 5.5e-14 81.3 101 44.6
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 5.5e-14 81.3 91 49.5
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 5.5e-14 81.3 81 49.4
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 9.4e-14 80.5 101 43.6
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 1.2e-13 80.1 82 46.3
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 1.2e-13 80.1 87 48.3
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 2.1e-13 79.3 106 42.5
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 2.1e-13 79.3 100 44.0
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 2.7e-13 79.0 108 39.8
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 3.6e-13 78.6 114 38.6
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 8.0e-13 77.4 96 40.6
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 1.0e-12 77.0 96 42.7
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 2.3e-12 75.9 132 37.9
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 4.0e-12 75.1 116 37.9
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 4.0e-12 75.1 112 39.3
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 4.0e-12 75.1 116 39.7
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 5.2e-12 74.7 91 39.6
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 6.8e-12 74.3 116 40.5
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 6.8e-12 74.3 93 46.2
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 6.8e-12 74.3 91 39.6
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 1.5e-11 73.2 116 37.1
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 1.5e-11 73.2 79 49.4
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 1.5e-11 73.2 81 48.1
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 2.0e-11 72.8 82 46.3
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 2.0e-11 72.8 116 38.8
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 2.0e-11 72.8 84 50.0
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 2.6e-11 72.4 116 39.7
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 3.4e-11 72.0 116 39.7
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 3.4e-11 72.0 116 38.8
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 3.4e-11 72.0 116 39.7
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 3.4e-11 72.0 116 38.8
THA.LOC104821809 Tarenaya hassleriana HOM05D007246 ORTHO05D009066 3.4e-11 72.0 109 39.4
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 7.5e-11 70.9 106 41.5
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 7.5e-11 70.9 107 40.2
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 7.5e-11 70.9 107 40.2
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 7.5e-11 70.9 116 39.7
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 9.8e-11 70.5 118 37.3
HPP92_002815 Vanilla planifolia HOM05D007246 ORTHO05D009066 2.8e-10 68.9 79 48.1
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 8.3e-10 67.4 107 40.2
Os06g0149500 Oryza sativa ssp. japonica HOM05D007246 ORTHO05D009066 1.4e-09 66.6 78 43.6
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 1.4e-09 66.6 108 37.0
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 1.4e-09 66.6 64 53.1
BraA06t23667Z Brassica rapa HOM05D007246 ORTHO05D009066 3.1e-09 65.5 117 37.6
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 1.5e-06 56.6 93 34.4
SGA_v2.0_scaffold52G18969 Striga asiatica HOM05D007246 ORTHO05D009066 1.5e-06 56.6 93 35.5
BcaB07g33783 Brassica carinata HOM05D007246 ORTHO05D009066 1.9e-06 56.2 107 38.3
Carub.0007s3396 Capsella rubella HOM05D007246 ORTHO05D009066 3.3e-06 55.5 104 37.5
CARHR037830 Cardamine hirsuta HOM05D007246 ORTHO05D009066 3.3e-06 55.5 70 41.4


User provided reference genes

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