Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1640 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 1.0e-220 770.0 451 100.0
CDE06G1231 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 6.7e-108 395.2 248 86.3
MBI06_g20714_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 8.3e-82 308.5 407 50.6
Nn5g28219 Nelumbo nucifera HOM05D005355 ORTHO05D006591 1.8e-81 307.4 427 51.1
GSVIVG01008886001 Vitis vinifera HOM05D005355 ORTHO05D006591 5.9e-80 302.4 422 49.5
TAR625G0673 Trochodendron aralioides HOM05D005355 ORTHO05D006591 1.3e-71 274.6 414 49.3
Duzib093G2154 Durio zibethinus HOM05D005355 ORTHO05D006591 3.9e-71 273.1 417 46.0
Ciclev10000938m.g Citrus clementina HOM05D005355 ORTHO05D006591 6.6e-71 272.3 412 46.1
Potri.002G085000 Populus trichocarpa HOM05D005355 ORTHO05D006591 2.1e-69 267.3 419 45.3
VMungo1309G2754 Vigna mungo HOM05D005355 ORTHO05D006591 3.6e-69 266.5 419 45.6
Thecc.08G123400 Theobroma cacao HOM05D005355 ORTHO05D006591 1.4e-68 264.6 439 43.5
Manes.18G076200 Manihot esculenta HOM05D005355 ORTHO05D006591 4.4e-67 259.6 411 46.0
MSTRG.326 Avicennia marina HOM05D005355 ORTHO05D006591 5.8e-67 259.2 410 45.9
Eucgr.F04357 Eucalyptus grandis HOM05D005355 ORTHO05D006591 9.8e-67 258.5 412 44.9
MD15G1351600 Malus domestica HOM05D005355 ORTHO05D006591 2.9e-66 256.9 456 41.4
Glyma.06G112300 Glycine max HOM05D005355 ORTHO05D006591 8.3e-66 255.4 399 46.1
arahy.Tifrunner.gnm1.ann1.SCI4MN Arachis hypogaea HOM05D005355 ORTHO05D006591 1.1e-65 255.0 414 44.9
CSS0023513 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 1.1e-65 255.0 413 44.1
PSO170G1761 Papaver somniferum HOM05D005355 ORTHO05D006591 1.4e-65 254.6 431 43.2
Phvul.009G124200 Phaseolus vulgaris HOM05D005355 ORTHO05D006591 1.4e-65 254.6 418 44.0
Duzib116G0422 Durio zibethinus HOM05D005355 ORTHO05D006591 5.4e-65 252.7 435 42.1
CiPaw.05G223300 Carya illinoinensis HOM05D005355 ORTHO05D006591 7.0e-65 252.3 409 44.0
CsaV3_2G014020 Cucumis sativus L. HOM05D005355 ORTHO05D006591 1.2e-64 251.5 417 43.6
PGR044G2411 Punica granatum HOM05D005355 ORTHO05D006591 2.7e-64 250.4 416 43.8
Hund27026 Selenicereus undatus HOM05D005355 ORTHO05D006591 2.7e-64 250.4 435 42.8
PSO528G0270 Papaver somniferum HOM05D005355 ORTHO05D006591 6.0e-64 249.2 431 43.4
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 7.8e-64 248.8 401 46.1
Sabra02G0066400 Salix brachista HOM05D005355 ORTHO05D006591 1.0e-63 248.4 436 42.9
Glyma.04G250500 Glycine max HOM05D005355 ORTHO05D006591 1.3e-63 248.1 401 46.1
Thhalv10029139m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 1.7e-63 247.7 412 46.1
CiPaw.06G029200 Carya illinoinensis HOM05D005355 ORTHO05D006591 3.9e-63 246.5 417 44.6
TWI12G0790 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 3.9e-63 246.5 391 45.8
QL09p035410 Quercus lobata HOM05D005355 ORTHO05D006591 6.6e-63 245.7 402 44.5
Os11g0544600 Oryza sativa ssp. japonica HOM05D005355 ORTHO05D006591 8.6e-63 245.4 402 45.5
CSS0006134 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 1.1e-62 245.0 413 43.1
Aqoxy6G00187 Aquilegia oxysepala HOM05D005355 ORTHO05D006591 2.5e-62 243.8 385 44.9
Gorai.009G245100 Gossypium raimondii HOM05D005355 ORTHO05D006591 4.3e-62 243.0 433 44.1
Medtr3g072480 Medicago truncatula HOM05D005355 ORTHO05D006591 4.3e-62 243.0 415 43.6
arahy.Tifrunner.gnm1.ann1.Y2U2DK Arachis hypogaea HOM05D005355 ORTHO05D006591 5.6e-62 242.7 416 44.2
Dinv27329 Davidia involucrata HOM05D005355 ORTHO05D006591 7.3e-62 242.3 406 45.3
Ca_15194_v3 Cicer arietinum L. HOM05D005355 ORTHO05D006591 4.7e-61 239.6 421 42.3
Gorai.010G049600 Gossypium raimondii HOM05D005355 ORTHO05D006591 6.2e-61 239.2 433 42.7
Prupe.1G500200 Prunus persica HOM05D005355 ORTHO05D006591 6.2e-61 239.2 413 43.1
CAN.G127.21 Capsicum annuum HOM05D005355 ORTHO05D006591 1.1e-60 238.4 418 43.1
TWI56G0611 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 8.9e-60 235.3 389 45.2
Gohir.A06G043600 Gossypium hirsutum HOM05D005355 ORTHO05D006591 1.2e-59 235.0 434 41.0
Zm00001eb113700 Zea mays HOM05D005355 ORTHO05D006591 2.0e-59 234.2 407 43.5
FAN27G0453 Fragaria x ananassa HOM05D005355 ORTHO05D006591 5.8e-59 232.6 400 40.8
CANSAT25G1794 Cannabis sativa HOM05D005355 ORTHO05D006591 1.3e-58 231.5 421 41.8
MD00G1157400 Malus domestica HOM05D005355 ORTHO05D006591 1.7e-58 231.1 457 39.8
Gohir.A05G234400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 3.7e-58 229.9 415 43.4
Gohir.D05G236700 Gossypium hirsutum HOM05D005355 ORTHO05D006591 3.7e-58 229.9 411 44.3
Oeu062052.1 Olea europaea HOM05D005355 ORTHO05D006591 4.9e-58 229.6 408 41.2
Sabra05G0133000 Salix brachista HOM05D005355 ORTHO05D006591 4.9e-58 229.6 507 38.3
Gohir.D06G044400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 6.4e-58 229.2 433 41.3
Cpa.g.sc36.50 Carica papaya HOM05D005355 ORTHO05D006591 1.1e-57 228.4 411 44.5
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 2.4e-57 227.3 400 43.8
ATR0104G007 Amborella trichopoda HOM05D005355 ORTHO05D006591 3.2e-57 226.9 421 40.6
Sc01g0001210 Simmondsia chinensis HOM05D005355 ORTHO05D006591 2.1e-56 224.2 399 42.1
TPR.G24014 Trifolium pratense HOM05D005355 ORTHO05D006591 4.6e-56 223.0 407 42.3
CDE06G0823 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 1.0e-55 221.9 142 88.7
AL1G52440 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 1.3e-55 221.5 416 40.9
Lj1g0013612 Lotus japonicus HOM05D005355 ORTHO05D006591 1.7e-55 221.1 414 42.5
Thhalv10011453m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 6.6e-55 219.2 409 40.1
ClCG08G005570 Citrullus lanatus HOM05D005355 ORTHO05D006591 1.1e-54 218.4 413 41.2
Migut.F01876 Erythranthe guttata HOM05D005355 ORTHO05D006591 1.1e-54 218.4 423 43.7
FAN24G2565 Fragaria x ananassa HOM05D005355 ORTHO05D006591 2.5e-54 217.2 401 40.6
ECA238G0419 Erigeron canadensis HOM05D005355 ORTHO05D006591 3.3e-54 216.9 406 42.1
MELO3C010600.2 Cucumis melo HOM05D005355 ORTHO05D006591 4.3e-54 216.5 410 40.5
FAN20G1264 Fragaria x ananassa HOM05D005355 ORTHO05D006591 4.3e-54 216.5 401 40.6
SGA_v2.0_scaffold122G33176 Striga asiatica HOM05D005355 ORTHO05D006591 7.3e-54 215.7 418 42.8
Psat5g132440 Pisum sativum HOM05D005355 ORTHO05D006591 9.6e-54 215.3 435 40.7
THA.LOC104817273 Tarenaya hassleriana HOM05D005355 ORTHO05D006591 9.6e-54 215.3 404 40.3
Sp1g33640 Schrenkiella parvula HOM05D005355 ORTHO05D006591 2.1e-53 214.2 405 39.0
RcHm_v2.0_Chr6g0295601 Rosa chinensis HOM05D005355 ORTHO05D006591 4.7e-53 213.0 401 39.4
AT1G44780 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 6.2e-53 212.6 402 40.3
C06p00770 Brassica napus HOM05D005355 ORTHO05D006591 5.2e-52 209.5 401 39.2
Potri.005G176400 Populus trichocarpa HOM05D005355 ORTHO05D006591 8.9e-52 208.8 489 39.3
Sopen11g007660 Solanum pennellii HOM05D005355 ORTHO05D006591 2.0e-51 207.6 419 41.3
CARHR259390 Cardamine hirsuta HOM05D005355 ORTHO05D006591 2.6e-51 207.2 416 38.9
Cc00_g04310 Coffea canephora HOM05D005355 ORTHO05D006591 4.4e-51 206.5 389 38.6
Atru.chr13.1433 Acer truncatum HOM05D005355 ORTHO05D006591 7.6e-51 205.7 271 53.5
EL10Ac1g01045 Beta vulgaris HOM05D005355 ORTHO05D006591 1.7e-50 204.5 420 37.4
Lalb_Chr08g0241491 Lupinus albus HOM05D005355 ORTHO05D006591 2.2e-50 204.1 407 41.3
A10p07350 Brassica napus HOM05D005355 ORTHO05D006591 2.9e-50 203.8 404 39.9
Cfa016002 Carpinus fangiana HOM05D005355 ORTHO05D006591 8.4e-50 202.2 370 42.2
BraSC36t46079Z Brassica rapa HOM05D005355 ORTHO05D006591 3.2e-49 200.3 404 39.4
Aa31LG9G14260 Aethionema arabicum HOM05D005355 ORTHO05D006591 4.2e-49 199.9 401 39.7
BolC6t35219H Brassica oleracea HOM05D005355 ORTHO05D006591 9.2e-49 198.7 392 38.0
Solyc11g012920.3 Solanum lycopersicum HOM05D005355 ORTHO05D006591 9.2e-49 198.7 415 39.8
Nitab4.5_0001803g0130 Nicotiana tabacum HOM05D005355 ORTHO05D006591 1.2e-48 198.4 287 48.8
Sp6g09690 Schrenkiella parvula HOM05D005355 ORTHO05D006591 1.6e-48 198.0 415 40.2
BcaB07g33934 Brassica carinata HOM05D005355 ORTHO05D006591 2.1e-48 197.6 399 38.8
BcaC08g42867 Brassica carinata HOM05D005355 ORTHO05D006591 2.7e-48 197.2 386 37.8
Haze_00460 Corylus avellana HOM05D005355 ORTHO05D006591 1.3e-47 194.9 355 42.8
RhsimUnG0093800 Rhododendron simsii HOM05D005355 ORTHO05D006591 3.0e-47 193.7 370 41.1
DCAR_011614 Daucus carota HOM05D005355 ORTHO05D006591 6.6e-47 192.6 321 46.1
Lsat_1_v5_gn_5_101461 Lactuca sativa HOM05D005355 ORTHO05D006591 1.5e-46 191.4 406 38.2
HanXRQChr04g0109451 Helianthus annuus HOM05D005355 ORTHO05D006591 7.3e-46 189.1 406 37.4
Carub.0006s2687 Capsella rubella HOM05D005355 ORTHO05D006591 1.6e-45 188.0 404 38.9
FAN15G2971 Fragaria x ananassa HOM05D005355 ORTHO05D006591 1.1e-44 185.3 435 36.6
AL6G42080 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 1.4e-44 184.9 418 39.5
Lj4A622G14 Lonicera japonica HOM05D005355 ORTHO05D006591 1.4e-44 184.9 379 42.0
AT4G08310 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 6.9e-44 182.6 400 40.5
SHI29459 Sapria himalayana HOM05D005355 ORTHO05D006591 6.9e-44 182.6 398 35.9
unitig_52.g17510 Utricularia gibba HOM05D005355 ORTHO05D006467 8.4e-42 175.6 438 35.4
FvH4_2g26711 Fragaria vesca HOM05D005355 ORTHO05D006591 5.4e-41 172.9 365 38.1
Sed0010827 Sechium edule HOM05D005355 ORTHO05D006591 3.9e-39 166.8 293 44.7
CARHR036040 Cardamine hirsuta HOM05D005355 ORTHO05D006591 6.6e-39 166.0 401 35.7
AUR62019052 Chenopodium quinoa HOM05D005355 ORTHO05D006591 1.1e-36 158.7 366 35.8
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 3.1e-36 157.1 278 42.1
vmacro00824 Vaccinium macrocarpon HOM05D005355 ORTHO05D006591 1.2e-35 155.2 399 36.8
AagrBONN_evm.TU.Sc2ySwM_362.1810 Anthoceros agrestis HOM05D005355 ORTHO05D006591 9.6e-30 135.6 466 30.7
MBI15_g19197_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 5.3e-28 129.8 99 70.7
COL.COLO4_35946 Corchorus olitorius HOM05D005355 ORTHO05D006591 1.0e-26 125.6 285 36.5
SMO230G0121 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 2.9e-26 124.0 407 29.2
AUR62027892 Chenopodium quinoa HOM05D005355 ORTHO05D006591 6.5e-26 122.9 371 34.2
Pp3c21_16190 Physcomitrium patens HOM05D005355 ORTHO05D006591 8.4e-26 122.5 428 32.5
Mapoly0004s0202 Marchantia polymorpha HOM05D005355 ORTHO05D006591 1.0e-23 115.5 435 28.7
Carub.0001s3530 Capsella rubella HOM05D005355 ORTHO05D006591 6.2e-21 106.3 137 48.2
SMO230G0058 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 1.2e-19 102.1 134 46.3
CBR_g29492 Chara braunii HOM05D005355 ORTHO05D006591 1.6e-16 91.7 99 47.5
arahy.Tifrunner.gnm1.ann1.V8LFJN Arachis hypogaea HOM05D005355 ORTHO05D006591 2.7e-16 90.9 298 31.9
SMO367G1068 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 3.5e-16 90.5 386 27.5
Peaxi162Scf00914g00033 Petunia axillaris HOM05D005355 ORTHO05D006591 3.3e-14 84.0 276 33.7
Nitab4.5_0001273g0020 Nicotiana tabacum HOM05D005355 ORTHO05D006591 5.7e-14 83.2 67 67.2
Atru.chr13.1434 Acer truncatum HOM05D005355 ORTHO05D006591 9.0e-12 75.9 148 40.5
HPP92_011157 Vanilla planifolia HOM05D005355 ORTHO05D006591 1.2e-11 75.5 281 31.3
SGA_v2.0_scaffold340G49302 Striga asiatica HOM05D005355 ORTHO05D006591 4.5e-11 73.6 149 39.6
Nn8g40262 Nelumbo nucifera HOM05D005355 ORTHO05D006591 1.5e-06 58.5 63 49.2
DCAR_011615 Daucus carota HOM05D005355 ORTHO05D006591 2.5e-06 57.8 57 50.9
MBI15_g42534_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 5.7e-06 56.6 43 62.8
Nitab4.5_0001803g0110 Nicotiana tabacum HOM05D005355 ORTHO05D006591 5.7e-06 56.6 77 41.6
SGA_v2.0_scaffold340G49301 Striga asiatica HOM05D005355 ORTHO05D006591 9.7e-06 55.8 86 45.3


User provided reference genes

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