Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1596 Ceratophyllum demersum HOM05D006020 ORTHO05D007665 3.0e-221 771.5 390 100.0
Dinv19209 Davidia involucrata HOM05D006020 ORTHO05D007665 2.0e-108 396.7 375 56.0
TAR365G0939 Trochodendron aralioides HOM05D006020 ORTHO05D007665 3.2e-106 389.4 370 54.6
TAR362G0890 Trochodendron aralioides HOM05D006020 ORTHO05D007665 4.2e-106 389.0 354 57.6
Dinv04657 Davidia involucrata HOM05D006020 ORTHO05D007665 7.1e-106 388.3 379 54.4
Thecc.01G227300 Theobroma cacao HOM05D006020 ORTHO05D007665 1.0e-104 384.4 371 52.8
MBI10_g05712_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.8e-104 383.6 372 54.3
Nn1g07811 Nelumbo nucifera HOM05D006020 ORTHO05D007665 3.0e-104 382.9 372 55.4
Duzib133G0822 Durio zibethinus HOM05D006020 ORTHO05D007665 6.7e-104 381.7 372 52.7
GSVIVG01028621001 Vitis vinifera HOM05D006020 ORTHO05D007665 9.6e-103 377.9 373 54.4
Gorai.007G153400 Gossypium raimondii HOM05D006020 ORTHO05D007665 9.0e-101 371.3 372 52.4
Potri.002G241200 Populus trichocarpa HOM05D006020 ORTHO05D007665 9.0e-101 371.3 373 51.7
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 2.0e-100 370.2 386 50.8
Aqoxy5G00068 Aquilegia oxysepala HOM05D006020 ORTHO05D007665 2.6e-100 369.8 375 51.7
Lj1C84T12 Lonicera japonica HOM05D006020 ORTHO05D007665 3.4e-100 369.4 378 53.2
Gohir.A11G136800 Gossypium hirsutum HOM05D006020 ORTHO05D007665 5.8e-100 368.6 372 52.2
Manes.12G041000 Manihot esculenta HOM05D006020 ORTHO05D007665 5.8e-100 368.6 372 51.6
CiPaw.04G106000 Carya illinoinensis HOM05D006020 ORTHO05D007665 6.5e-99 365.2 373 50.4
Gohir.D11G143100 Gossypium hirsutum HOM05D006020 ORTHO05D007665 6.5e-99 365.2 381 51.4
Manes.13G045000 Manihot esculenta HOM05D006020 ORTHO05D007665 1.9e-98 363.6 374 50.3
ATR0736G004 Amborella trichopoda HOM05D006020 ORTHO05D007665 4.2e-98 362.5 369 50.4
Oeu042519.1 Olea europaea HOM05D006020 ORTHO05D007665 5.5e-98 362.1 370 51.9
Sabra02G0183800 Salix brachista HOM05D006020 ORTHO05D007665 5.5e-98 362.1 379 50.9
COL.COLO4_09005 Corchorus olitorius HOM05D006020 ORTHO05D007665 7.1e-98 361.7 424 46.5
TWI75G0236 Tripterygium wilfordii HOM05D006020 ORTHO05D007665 9.3e-98 361.3 375 49.3
Atru.chr5.2019 Acer truncatum HOM05D006020 ORTHO05D007665 6.0e-97 358.6 375 51.2
MSTRG.17550 Avicennia marina HOM05D006020 ORTHO05D007665 3.9e-96 355.9 370 50.5
Migut.N02265 Erythranthe guttata HOM05D006020 ORTHO05D007665 1.5e-95 354.0 373 49.6
Ciclev10019729m.g Citrus clementina HOM05D006020 ORTHO05D007665 1.9e-95 353.6 373 49.3
RcHm_v2.0_Chr6g0285011 Rosa chinensis HOM05D006020 ORTHO05D007665 1.9e-95 353.6 371 52.0
Nitab4.5_0002085g0020 Nicotiana tabacum HOM05D006020 ORTHO05D007665 9.6e-95 351.3 378 49.5
FvH4_2g19230 Fragaria vesca HOM05D006020 ORTHO05D007665 1.3e-94 350.9 373 51.2
PGR044G0586 Punica granatum HOM05D006020 ORTHO05D007665 1.3e-94 350.9 372 49.5
Sc05g0002440 Simmondsia chinensis HOM05D006020 ORTHO05D007665 1.6e-94 350.5 378 49.2
FAN24G1617 Fragaria x ananassa HOM05D006020 ORTHO05D007665 2.1e-94 350.1 373 51.2
Actinidia37585 Actinidia chinensis HOM05D006020 ORTHO05D007665 2.8e-94 349.7 373 50.9
Nitab4.5_0004922g0030 Nicotiana tabacum HOM05D006020 ORTHO05D007665 9.0e-93 344.7 378 48.7
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 2.0e-92 343.6 374 48.9
Prupe.8G204200 Prunus persica HOM05D006020 ORTHO05D007665 2.6e-92 343.2 373 49.6
vmacro02750 Vaccinium macrocarpon HOM05D006020 ORTHO05D007665 4.5e-92 342.4 445 44.3
BraA02t08755Z Brassica rapa HOM05D006020 ORTHO05D007665 5.9e-92 342.0 373 49.1
FAN27G2268 Fragaria x ananassa HOM05D006020 ORTHO05D007665 7.6e-92 341.7 373 50.7
C07p39450 Brassica napus HOM05D006020 ORTHO05D007665 1.7e-91 340.5 376 47.9
BolC7t44464H Brassica oleracea HOM05D006020 ORTHO05D007665 1.7e-91 340.5 376 47.9
BraA06t26802Z Brassica rapa HOM05D006020 ORTHO05D007665 1.7e-91 340.5 381 48.3
Carub.0008s0856 Capsella rubella HOM05D006020 ORTHO05D007665 1.7e-91 340.5 376 48.4
AT5G48830 Arabidopsis thaliana HOM05D006020 ORTHO05D007665 2.2e-91 340.1 373 48.3
Thhalv10004024m.g Eutrema salsugineum HOM05D006020 ORTHO05D007665 2.2e-91 340.1 380 48.9
A02p37730 Brassica napus HOM05D006020 ORTHO05D007665 3.8e-91 339.3 373 49.6
Haze_24783 Corylus avellana HOM05D006020 ORTHO05D007665 3.8e-91 339.3 375 47.2
BcaB07g30043 Brassica carinata HOM05D006020 ORTHO05D007665 5.0e-91 339.0 377 48.8
BcaC06g30754 Brassica carinata HOM05D006020 ORTHO05D007665 8.4e-91 338.2 376 47.6
Aa31sc866G30 Aethionema arabicum HOM05D006020 ORTHO05D007665 1.1e-90 337.8 370 48.1
CANSAT01G2399 Cannabis sativa HOM05D006020 ORTHO05D007665 1.4e-90 337.4 372 50.3
MD05G1177200 Malus domestica HOM05D006020 ORTHO05D007665 3.2e-90 336.3 370 50.0
BolC2t11751H Brassica oleracea HOM05D006020 ORTHO05D007665 4.2e-90 335.9 373 48.8
Lj1g0020866 Lotus japonicus HOM05D006020 ORTHO05D007665 4.2e-90 335.9 373 49.6
PSO674G0123 Papaver somniferum HOM05D006020 ORTHO05D007665 4.2e-90 335.9 368 50.0
Sp2g19230 Schrenkiella parvula HOM05D006020 ORTHO05D007665 5.5e-90 335.5 375 48.8
CAN.G771.64 Capsicum annuum HOM05D006020 ORTHO05D007665 9.3e-90 334.7 375 48.8
BcaC03g17676 Brassica carinata HOM05D006020 ORTHO05D007665 1.2e-89 334.3 373 48.5
C02p56820 Brassica napus HOM05D006020 ORTHO05D007665 1.2e-89 334.3 373 48.5
Eucgr.K03608 Eucalyptus grandis HOM05D006020 ORTHO05D007665 2.1e-89 333.6 366 47.8
Solyc09g061420.3 Solanum lycopersicum HOM05D006020 ORTHO05D007665 3.5e-89 332.8 374 48.7
Glyma.18G171900 Glycine max HOM05D006020 ORTHO05D007665 4.6e-89 332.4 373 47.7
CARHR182910 Cardamine hirsuta HOM05D006020 ORTHO05D007665 7.9e-89 331.6 373 47.7
Hund05517 Selenicereus undatus HOM05D006020 ORTHO05D007665 7.9e-89 331.6 374 46.5
THA.LOC104818953 Tarenaya hassleriana HOM05D006020 ORTHO05D007665 1.8e-88 330.5 373 47.7
ECA236G4144 Erigeron canadensis HOM05D006020 ORTHO05D007665 3.0e-88 329.7 369 47.2
AL8G22000 Arabidopsis lyrata HOM05D006020 ORTHO05D007665 5.1e-88 328.9 375 47.5
QL04p091507 Quercus lobata HOM05D006020 ORTHO05D007665 3.3e-87 326.2 453 41.7
Sed0023867 Sechium edule HOM05D006020 ORTHO05D007665 5.7e-87 325.5 373 47.2
Nitab4.5_0001872g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 7.4e-87 325.1 376 48.1
arahy.Tifrunner.gnm1.ann1.PQ4NGV Arachis hypogaea HOM05D006020 ORTHO05D007665 1.6e-86 323.9 367 48.8
HanXRQChr10g0287321 Helianthus annuus HOM05D006020 ORTHO05D007665 2.2e-86 323.6 364 47.8
Nitab4.5_0000045g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 2.8e-86 323.2 375 47.7
Lalb_Chr19g0125561 Lupinus albus HOM05D006020 ORTHO05D007665 3.7e-86 322.8 370 46.5
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 4.8e-86 322.4 371 48.5
TPR.G15290 Trifolium pratense HOM05D006020 ORTHO05D007665 6.3e-86 322.0 375 46.7
MELO3C012759.2 Cucumis melo HOM05D006020 ORTHO05D007665 8.2e-86 321.6 371 48.5
FAN15G0009 Fragaria x ananassa HOM05D006020 ORTHO05D007665 8.2e-86 321.6 426 44.6
CsaV3_7G025840 Cucumis sativus L. HOM05D006020 ORTHO05D007665 1.1e-85 321.2 370 47.8
Medtr7g058760 Medicago truncatula HOM05D006020 ORTHO05D007665 1.1e-85 321.2 372 46.2
VMungo1383G1607 Vigna mungo HOM05D006020 ORTHO05D007665 1.8e-85 320.5 367 47.1
EL10Ac7g17782 Beta vulgaris HOM05D006020 ORTHO05D007665 3.1e-85 319.7 372 45.7
Cc01_g17190 Coffea canephora HOM05D006020 ORTHO05D007665 5.0e-83 312.4 372 46.8
MBI19_g27116_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 6.5e-83 312.0 310 52.3
Ah.08g213940 Amaranthus hybridus HOM05D006020 ORTHO05D007665 8.5e-83 311.6 374 44.7
Phvul.008G124000 Phaseolus vulgaris HOM05D006020 ORTHO05D007665 1.1e-82 311.2 367 46.6
AUR62031841 Chenopodium quinoa HOM05D006020 ORTHO05D007665 1.2e-81 307.8 377 43.8
SalBow2G1017 Salvia bowleyana HOM05D006020 ORTHO05D007665 1.0e-80 304.7 375 46.9
Zm00001eb241910 Zea mays HOM05D006020 ORTHO05D007665 5.1e-80 302.4 368 47.6
HPP92_017884 Vanilla planifolia HOM05D006020 ORTHO05D007665 6.3e-78 295.4 368 43.5
Sopen09g024240 Solanum pennellii HOM05D006020 ORTHO05D007665 1.8e-77 293.9 462 39.4
AUR62008869 Chenopodium quinoa HOM05D006020 ORTHO05D007665 2.4e-77 293.5 420 39.8
PSO170G4604 Papaver somniferum HOM05D006020 ORTHO05D007665 1.3e-75 287.7 327 47.7
ClCG09G009100 Citrullus lanatus HOM05D006020 ORTHO05D007665 2.2e-75 287.0 309 48.5
SEGI_37377 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 4.7e-65 252.7 372 39.2
Glyma.08G355500 Glycine max HOM05D006020 ORTHO05D007665 2.2e-62 243.8 319 43.6
Actinidia30087 Actinidia chinensis HOM05D006020 ORTHO05D007665 1.4e-61 241.1 204 58.3
MBI01_g07173_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.5e-55 221.1 287 43.2
Mapoly0173s0025 Marchantia polymorpha HOM05D006020 ORTHO05D007665 6.3e-54 215.7 382 34.8
HPP92_017879 Vanilla planifolia HOM05D006020 ORTHO05D007665 4.1e-53 213.0 274 42.3
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 1.6e-52 211.1 316 40.2
AagrBONN_evm.TU.Sc2ySwM_344.2296 Anthoceros agrestis HOM05D006020 ORTHO05D007665 8.5e-51 205.3 371 36.7
MBI09_g17752_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.2e-49 201.4 310 39.0
arahy.Tifrunner.gnm1.ann1.3CP2KK Arachis hypogaea HOM05D001055 ORTHO05D000867 1.6e-49 201.1 211 49.8
Pp3c24_4300 Physcomitrium patens HOM05D006020 ORTHO05D007665 4.9e-46 189.5 392 33.2
SEGI_14686 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 6.6e-43 179.1 233 43.3
SGA_v2.0_scaffold42G16144 Striga asiatica HOM05D006020 ORTHO05D007665 3.3e-42 176.8 244 43.4
Peaxi162Scf00107g00133 Petunia axillaris HOM05D006020 ORTHO05D007665 1.4e-40 171.4 372 33.3
SMO115G0313 Selaginella moellendorffii HOM05D006020 ORTHO05D007665 1.3e-38 164.9 372 31.7
Psat3g144000 Pisum sativum HOM05D006020 ORTHO05D007665 4.9e-38 162.9 142 53.5
unitig_85.g27279 Utricularia gibba HOM05D006020 ORTHO05D007665 3.5e-28 130.2 141 46.8
MBI16_g14987_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.3e-27 127.5 125 51.2
MBI12_g18650_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 5.0e-27 126.3 136 49.3
Cpa.g.sc8.167 Carica papaya HOM05D006020 ORTHO05D007665 3.1e-24 117.1 120 49.2
CDE04G0608 Ceratophyllum demersum HOM05D006020 ORTHO05D007665 7.1e-21 105.9 58 82.8
arahy.Tifrunner.gnm1.ann1.PG1H4F Arachis hypogaea HOM05D006020 ORTHO05D007665 2.7e-20 104.0 158 42.4
MBI16_g14988_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 7.6e-15 85.9 101 41.6
MBI12_g40856_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.3e-14 85.1 111 39.6
PRCOL_00001532 Prasinoderma coloniale HOM05D006020 ORTHO05D007665 6.4e-14 82.8 191 29.3
CBR_g31943 Chara braunii HOM05D006020 ORTHO05D007665 9.2e-13 79.0 65 50.8
FAN15G1634 Fragaria x ananassa HOM05D006020 ORTHO05D007665 1.0e-11 75.5 120 39.2
Psat3g144040 Pisum sativum HOM05D006020 ORTHO05D007665 1.1e-10 72.0 119 36.1
MCO16G349 Micromonas commoda HOM05D006020 ORTHO05D007665 8.4e-06 55.8 63 42.9


User provided reference genes

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