Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 1.8e-99 365.9 182 100.0
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 1.6e-55 219.9 183 58.5
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 3.5e-55 218.8 172 62.2
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 1.5e-53 213.4 180 57.8
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 3.3e-53 212.2 180 55.0
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 3.3e-53 212.2 180 57.2
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 2.1e-52 209.5 180 55.0
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 2.8e-52 209.1 180 55.0
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 2.8e-52 209.1 180 56.7
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 6.2e-52 208.0 177 55.9
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 8.0e-52 207.6 181 53.6
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 1.0e-51 207.2 180 53.9
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 1.8e-51 206.5 180 53.3
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 2.3e-51 206.1 180 53.3
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 2.3e-51 206.1 177 55.9
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 2.3e-51 206.1 180 55.6
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 4.0e-51 205.3 173 56.1
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 4.0e-51 205.3 180 56.1
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 8.9e-51 204.1 180 52.8
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 8.9e-51 204.1 173 57.2
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 1.5e-50 203.4 180 53.3
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 1.5e-50 203.4 181 53.0
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 2.0e-50 203.0 180 53.3
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 2.0e-50 203.0 180 55.0
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 2.6e-50 202.6 180 54.4
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 3.4e-50 202.2 180 52.8
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 5.8e-50 201.4 180 52.2
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 5.8e-50 201.4 180 53.9
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 7.5e-50 201.1 181 54.1
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 7.5e-50 201.1 174 53.4
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 9.8e-50 200.7 181 53.6
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 9.8e-50 200.7 181 53.6
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 1.7e-49 199.9 173 54.3
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 2.2e-49 199.5 177 53.1
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 2.2e-49 199.5 180 52.2
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 2.9e-49 199.1 181 52.5
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 3.7e-49 198.7 180 53.9
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 3.7e-49 198.7 180 52.8
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 6.4e-49 198.0 177 53.7
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 6.4e-49 198.0 177 52.5
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 8.3e-49 197.6 173 54.3
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 1.1e-48 197.2 180 53.3
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 1.4e-48 196.8 180 52.2
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.9e-48 196.4 180 51.7
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 2.4e-48 196.1 180 51.7
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 5.4e-48 194.9 183 53.0
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 9.2e-48 194.1 177 50.8
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 1.2e-47 193.7 177 53.7
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 1.6e-47 193.4 174 53.4
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 1.6e-47 193.4 177 52.5
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 1.6e-47 193.4 181 50.8
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.0e-47 193.0 177 50.8
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 2.7e-47 192.6 173 52.6
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 3.5e-47 192.2 172 52.3
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 4.6e-47 191.8 180 52.2
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 7.8e-47 191.0 177 50.3
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 1.0e-46 190.7 180 48.9
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 2.3e-46 189.5 180 51.1
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 2.3e-46 189.5 172 53.5
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 2.3e-46 189.5 177 50.3
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 3.0e-46 189.1 173 50.9
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 3.0e-46 189.1 177 51.4
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 3.9e-46 188.7 174 50.6
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 5.0e-46 188.3 172 53.5
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 8.6e-46 187.6 180 50.6
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 1.5e-45 186.8 180 51.7
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 1.5e-45 186.8 177 49.7
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 1.9e-45 186.4 177 52.5
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.5e-45 186.0 169 52.1
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 5.6e-45 184.9 180 50.6
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 7.3e-45 184.5 178 53.4
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 9.5e-45 184.1 172 52.3
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.6e-44 183.3 183 49.7
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.6e-44 183.3 209 45.9
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.8e-44 182.6 178 52.8
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.8e-44 182.6 178 52.8
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 6.2e-44 181.4 178 51.7
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 1.1e-43 180.6 178 52.2
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.1e-43 180.6 178 52.8
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 1.1e-43 180.6 179 47.5
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.8e-43 179.9 180 51.7
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.8e-43 179.9 180 51.7
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 4.0e-43 178.7 171 51.5
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 8.9e-43 177.6 177 46.3
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 4.4e-42 175.3 175 48.6
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 1.3e-41 173.7 172 47.1
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 1.7e-41 173.3 174 47.7
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 6.4e-41 171.4 179 45.8
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 1.4e-40 170.2 173 47.4
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 1.9e-40 169.9 174 44.8
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 1.9e-40 169.9 173 46.8
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 7.1e-40 167.9 167 48.5
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 1.6e-39 166.8 181 47.0
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 3.0e-38 162.5 180 47.2
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 3.0e-38 162.5 173 49.1
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 5.1e-38 161.8 187 47.6
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 5.1e-38 161.8 180 42.8
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 5.1e-38 161.8 173 48.6
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 7.3e-37 157.9 171 46.2
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 2.1e-36 156.4 173 47.4
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 2.0e-34 149.8 182 44.0
Haze_20779 Corylus avellana HOM05D003570 ORTHO05D004207 4.4e-34 148.7 111 62.2
CSS0045431 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 5.4e-32 141.7 111 61.3
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 2.1e-31 139.8 184 43.5
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 7.8e-31 137.9 182 42.3
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 5.1e-30 135.2 184 42.4
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 8.6e-30 134.4 176 42.0
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 3.3e-29 132.5 193 39.9
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 7.3e-29 131.3 176 39.8
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 6.2e-28 128.3 180 39.4
Sopen04g013730 Solanum pennellii HOM05D003570 ORTHO05D004207 6.2e-28 128.3 113 52.2
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 1.1e-27 127.5 178 37.6
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 1.1e-27 127.5 178 37.6
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 1.1e-27 127.5 178 37.6
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 1.1e-27 127.5 181 39.8
EL10Ac8g19584 Beta vulgaris HOM05D003570 ORTHO05D004207 4.0e-27 125.6 117 52.1
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 4.0e-27 125.6 178 37.1
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 3.4e-26 122.5 180 37.2
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 2.1e-23 113.2 179 33.0
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 2.7e-23 112.8 177 38.4
Hma1.2p1_0054F.1_g030990 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 4.8e-20 102.1 88 53.4
Medtr7g034350 Medicago truncatula HOM05D003570 ORTHO05D004207 1.1e-19 100.9 178 35.4
TAR374G0522 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.3e-17 94.0 92 53.3
AL2G22720 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 6.4e-17 91.7 127 43.3
Cre06.g300900 Chlamydomonas reinhardtii HOM05D003570 ORTHO05D004207 8.4e-17 91.3 182 34.6
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.2e-16 89.4 115 45.2
Glyma.18G013000 Glycine max HOM05D003570 ORTHO05D004207 7.9e-15 84.7 84 50.0
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.0e-14 84.3 136 39.7
BolC5t29767H Brassica oleracea HOM05D003570 ORTHO05D004207 3.9e-14 82.4 176 31.8
FvH4_5g15750 Fragaria vesca HOM05D003570 ORTHO05D004207 1.6e-12 77.0 73 57.5
Sp2g10400 Schrenkiella parvula HOM05D003570 ORTHO05D004207 4.8e-12 75.5 108 44.4
BcaC05g25084 Brassica carinata HOM05D003570 ORTHO05D004207 1.8e-11 73.6 176 29.5
C05p10220 Brassica napus HOM05D003570 ORTHO05D004207 5.8e-10 68.6 122 33.6
Actinidia15111 Actinidia chinensis HOM05D003570 ORTHO05D004207 2.9e-09 66.2 67 46.3
MD05G1151500 Malus domestica HOM05D003570 ORTHO05D004207 9.3e-08 61.2 51 56.9
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 1.6e-07 60.5 79 35.4
EL10Ac1g01653 Beta vulgaris HOM05D003570 ORTHO05D004207 2.7e-07 59.7 55 52.7
Actinidia15112 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.3e-06 57.4 61 45.9


User provided reference genes

Program Settings