Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 6.4e-55 217.2 114 100.0
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 4.7e-34 147.9 107 72.9
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 1.1e-33 146.7 108 70.4
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 1.4e-33 146.4 108 69.4
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 3.1e-33 145.2 108 67.6
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 6.8e-33 144.1 106 69.8
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 1.2e-32 143.3 89 78.7
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 1.5e-32 142.9 100 73.0
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 2.0e-32 142.5 89 77.5
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 3.4e-32 141.7 107 68.2
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 4.4e-32 141.4 97 75.3
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 5.8e-32 141.0 100 72.0
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 5.8e-32 141.0 100 72.0
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 1.3e-31 139.8 105 69.5
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 1.3e-31 139.8 105 69.5
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 1.7e-31 139.4 106 69.8
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 4.9e-31 137.9 88 77.3
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 6.4e-31 137.5 110 67.3
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 8.4e-31 137.1 110 63.6
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 8.4e-31 137.1 110 65.5
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 1.1e-30 136.7 92 75.0
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 1.4e-30 136.3 98 72.4
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 1.9e-30 136.0 91 74.7
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 2.4e-30 135.6 106 66.0
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 2.4e-30 135.6 98 70.4
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 2.4e-30 135.6 107 66.4
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 2.4e-30 135.6 108 68.5
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 2.4e-30 135.6 104 66.3
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 2.4e-30 135.6 110 65.5
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 2.4e-30 135.6 110 65.5
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 2.4e-30 135.6 89 76.4
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 3.2e-30 135.2 98 71.4
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 3.2e-30 135.2 99 71.7
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 3.2e-30 135.2 99 69.7
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 7.1e-30 134.0 99 67.7
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 9.2e-30 133.7 106 64.2
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 9.2e-30 133.7 103 68.9
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 1.2e-29 133.3 108 64.8
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 1.2e-29 133.3 99 70.7
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 1.2e-29 133.3 90 73.3
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 1.2e-29 133.3 91 73.6
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 1.6e-29 132.9 106 65.1
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 1.6e-29 132.9 110 63.6
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 2.1e-29 132.5 99 68.7
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 2.1e-29 132.5 101 68.3
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 2.1e-29 132.5 110 68.2
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 2.7e-29 132.1 87 74.7
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 3.5e-29 131.7 100 65.0
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 4.6e-29 131.3 105 65.7
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 6.0e-29 131.0 91 71.4
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 7.8e-29 130.6 97 68.0
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 7.8e-29 130.6 110 60.9
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 7.8e-29 130.6 110 61.8
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 7.8e-29 130.6 110 67.3
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 1.0e-28 130.2 88 76.1
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 1.3e-28 129.8 91 71.4
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 1.3e-28 129.8 90 74.4
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 1.7e-28 129.4 108 63.9
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 1.7e-28 129.4 98 68.4
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 2.3e-28 129.0 106 64.2
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 2.3e-28 129.0 102 64.7
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 2.3e-28 129.0 105 62.9
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 3.9e-28 128.3 88 73.9
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 3.9e-28 128.3 88 73.9
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 3.9e-28 128.3 88 73.9
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 3.9e-28 128.3 83 75.9
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 5.1e-28 127.9 106 64.2
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 5.1e-28 127.9 106 64.2
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 5.1e-28 127.9 90 72.2
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 8.6e-28 127.1 109 61.5
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 1.1e-27 126.7 102 63.7
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 1.5e-27 126.3 99 67.7
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 1.5e-27 126.3 99 67.7
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 1.5e-27 126.3 99 67.7
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 1.5e-27 126.3 102 65.7
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 1.9e-27 125.9 103 62.1
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 3.3e-27 125.2 90 71.1
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 3.3e-27 125.2 88 72.7
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 4.3e-27 124.8 115 59.1
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.3e-27 124.8 115 59.1
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 4.3e-27 124.8 115 59.1
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.3e-27 124.8 115 59.1
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.3e-27 124.8 115 59.1
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 4.3e-27 124.8 88 73.9
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 4.3e-27 124.8 88 71.6
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 5.6e-27 124.4 109 61.5
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 2.8e-26 122.1 81 71.6
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 3.6e-26 121.7 109 60.6
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 3.6e-26 121.7 88 68.2
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 4.7e-26 121.3 109 59.6
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 6.2e-26 120.9 88 67.0
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 6.2e-26 120.9 87 69.0
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 8.1e-26 120.6 88 67.0
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.1e-25 120.2 82 72.0
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 1.5e-24 116.3 114 55.3
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 6.4e-23 110.9 87 63.2
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 5.4e-22 107.8 100 62.0
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 7.1e-22 107.5 128 50.0
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 1.0e-20 103.6 85 62.4
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 1.7e-20 102.8 61 82.0
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 1.1e-19 100.1 97 48.5
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 3.3e-19 98.6 98 56.1
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 1.8e-17 92.8 65 67.7
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 9.0e-17 90.5 83 56.6
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 1.5e-16 89.7 84 58.3
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 1.5e-16 89.7 82 57.3
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 2.0e-16 89.4 77 59.7
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 2.2e-15 85.9 88 50.0
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 3.8e-15 85.1 83 55.4
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 7.1e-14 80.9 54 64.8
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 2.1e-13 79.3 55 67.3
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 1.0e-12 77.0 81 51.9
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 1.8e-12 76.3 85 48.2
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 1.8e-12 76.3 85 48.2
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 8.7e-12 73.9 64 54.7
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 1.1e-11 73.6 58 60.3
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 1.9e-11 72.8 70 58.6
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 2.5e-11 72.4 97 44.3
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 5.6e-11 71.2 58 58.6
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 1.6e-10 69.7 58 55.2
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 1.4e-09 66.6 70 55.7
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 2.6e-08 62.4 45 62.2
SHI31376 Sapria himalayana HOM05D006721 ORTHO05D000476 2.2e-07 59.3 46 60.9


User provided reference genes

Program Settings