Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1539 Ceratophyllum demersum HOM05D004776 ORTHO05D005777 9.5e-116 420.2 220 100.0
MBI18_g10191_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 1.4e-63 246.9 198 69.7
CiPaw.13G118600 Carya illinoinensis HOM05D004776 ORTHO05D005777 2.7e-62 242.7 180 73.3
Aqoxy2G01783 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 4.6e-62 241.9 180 70.6
Haze_23751 Corylus avellana HOM05D004776 ORTHO05D005777 3.0e-61 239.2 180 71.1
Eucgr.B02538 Eucalyptus grandis HOM05D004776 ORTHO05D005777 3.0e-61 239.2 180 70.6
Nn2g11574 Nelumbo nucifera HOM05D004776 ORTHO05D005777 3.9e-61 238.8 239 58.6
Medtr2g095420 Medicago truncatula HOM05D004776 ORTHO05D005777 6.7e-61 238.0 180 71.1
Cc01_g10560 Coffea canephora HOM05D004776 ORTHO05D005777 1.1e-60 237.3 239 58.6
vmacro14409 Vaccinium macrocarpon HOM05D004776 ORTHO05D005777 1.5e-60 236.9 198 66.2
Actinidia20436 Actinidia chinensis HOM05D004776 ORTHO05D005777 2.0e-60 236.5 198 65.7
Lj3g0025221 Lotus japonicus HOM05D004776 ORTHO05D005777 2.0e-60 236.5 180 71.1
Duzib170G0082 Durio zibethinus HOM05D004776 ORTHO05D005777 3.3e-60 235.7 239 58.2
PGR094G0002 Punica granatum HOM05D004776 ORTHO05D005777 3.3e-60 235.7 180 71.1
PGR094G0004 Punica granatum HOM05D004776 ORTHO05D005777 3.3e-60 235.7 180 71.1
PGR102G1642 Punica granatum HOM05D004776 ORTHO05D005777 3.3e-60 235.7 180 71.1
FAN28G2552 Fragaria x ananassa HOM05D004776 ORTHO05D005777 4.4e-60 235.3 180 70.0
Gorai.003G144600 Gossypium raimondii HOM05D004776 ORTHO05D005777 4.4e-60 235.3 239 57.3
Manes.04G015500 Manihot esculenta HOM05D004776 ORTHO05D005777 4.4e-60 235.3 198 65.2
QL01p015865 Quercus lobata HOM05D004776 ORTHO05D005777 4.4e-60 235.3 179 69.8
Phvul.005G131900 Phaseolus vulgaris HOM05D004776 ORTHO05D005777 5.7e-60 235.0 198 65.7
VMungo1080G0818 Vigna mungo HOM05D004776 ORTHO05D006187 5.7e-60 235.0 198 65.7
GSVIVG01031509001 Vitis vinifera HOM05D004776 ORTHO05D005777 5.7e-60 235.0 239 57.7
Thecc.09G348100 Theobroma cacao HOM05D004776 ORTHO05D005777 7.4e-60 234.6 198 65.2
CSS0005795 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 9.7e-60 234.2 198 65.2
CSS0042525 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 9.7e-60 234.2 198 65.2
FvH4_1g24650 Fragaria vesca HOM05D004776 ORTHO05D005777 9.7e-60 234.2 180 69.4
FAN19G0403 Fragaria x ananassa HOM05D004776 ORTHO05D005777 9.7e-60 234.2 180 69.4
Potri.009G007900 Populus trichocarpa HOM05D004776 ORTHO05D005777 9.7e-60 234.2 198 66.2
TAR623G0387 Trochodendron aralioides HOM05D004776 ORTHO05D005777 1.7e-59 233.4 239 58.2
MD11G1145200 Malus domestica HOM05D004776 ORTHO05D005777 2.2e-59 233.0 180 68.9
TPR.G11629 Trifolium pratense HOM05D004776 ORTHO05D005777 2.2e-59 233.0 238 58.0
PSO801G0074 Papaver somniferum HOM05D004776 ORTHO05D005777 3.7e-59 232.3 180 68.9
Actinidia03704 Actinidia chinensis HOM05D004776 ORTHO05D005777 4.8e-59 231.9 180 68.3
FAN23G0844 Fragaria x ananassa HOM05D004776 ORTHO05D005777 4.8e-59 231.9 180 68.9
FAN26G3463 Fragaria x ananassa HOM05D004776 ORTHO05D005777 4.8e-59 231.9 180 68.9
Gohir.A03G030900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 4.8e-59 231.9 239 56.9
Prupe.6G108100 Prunus persica HOM05D004776 ORTHO05D005777 4.8e-59 231.9 180 68.3
TWI31G0757 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 4.8e-59 231.9 180 69.4
DCAR_006106 Daucus carota HOM05D004776 ORTHO05D005777 6.3e-59 231.5 180 68.3
MBI18_g43296_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 6.3e-59 231.5 130 88.5
RcHm_v2.0_Chr2g0122071 Rosa chinensis HOM05D004776 ORTHO05D005777 6.3e-59 231.5 198 63.6
Gohir.D03G137500 Gossypium hirsutum HOM05D004776 ORTHO05D005777 8.2e-59 231.1 239 56.5
TWI79G1687 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 8.2e-59 231.1 243 57.6
Actinidia14011 Actinidia chinensis HOM05D004776 ORTHO05D005777 1.1e-58 230.7 199 63.3
Glyma.13G323400 Glycine max HOM05D004776 ORTHO05D005777 1.1e-58 230.7 180 68.9
Duzib168G1494 Durio zibethinus HOM05D004776 ORTHO05D005777 1.8e-58 229.9 198 64.1
Hma1.2p1_0569F.1_g180290 Hydrangea macrophylla HOM05D004776 ORTHO05D005777 1.8e-58 229.9 198 64.6
ATR1132G031 Amborella trichopoda HOM05D004776 ORTHO05D005777 2.4e-58 229.6 198 65.7
PSO339G3038 Papaver somniferum HOM05D004776 ORTHO05D005777 2.4e-58 229.6 177 68.9
HanXRQChr11g0346181 Helianthus annuus HOM05D004776 ORTHO05D005777 3.1e-58 229.2 239 57.3
SGA_v2.0_scaffold116G32209 Striga asiatica HOM05D004776 ORTHO05D005777 3.1e-58 229.2 180 67.2
COL.COLO4_34701 Corchorus olitorius HOM05D004776 ORTHO05D005777 5.3e-58 228.4 239 56.9
ECA248G3913 Erigeron canadensis HOM05D004776 ORTHO05D005777 5.3e-58 228.4 198 64.6
Oeu018486.2 Olea europaea HOM05D004776 ORTHO05D005777 1.2e-57 227.3 180 68.3
ClCG03G002670 Citrullus lanatus HOM05D004776 ORTHO05D005777 1.5e-57 226.9 226 56.6
CsaV3_1G013400 Cucumis sativus L. HOM05D004776 ORTHO05D005777 1.5e-57 226.9 239 57.3
Gorai.013G268700 Gossypium raimondii HOM05D004776 ORTHO05D005777 1.5e-57 226.9 198 64.1
CANSAT54G2950 Cannabis sativa HOM05D004776 ORTHO05D005777 2.0e-57 226.5 198 62.6
Sed0027733 Sechium edule HOM05D004776 ORTHO05D005777 2.0e-57 226.5 198 63.6
Lalb_Chr03g0027621 Lupinus albus HOM05D004776 ORTHO05D005777 2.6e-57 226.1 198 63.1
Psat0s3241g0040 Pisum sativum HOM05D004776 ORTHO05D005777 1.0e-56 224.2 241 57.3
SalBow3G4083 Salvia bowleyana HOM05D004776 ORTHO05D005777 1.0e-56 224.2 202 61.9
AL5G23530 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 1.7e-56 223.4 243 57.6
arahy.Tifrunner.gnm1.ann1.K18VCE Arachis hypogaea HOM05D004776 ORTHO05D005777 1.7e-56 223.4 228 57.0
arahy.Tifrunner.gnm1.ann1.UZ8W9W Arachis hypogaea HOM05D004776 ORTHO05D005777 1.7e-56 223.4 228 57.0
PSO339G3219 Papaver somniferum HOM05D004776 ORTHO05D005777 2.9e-56 222.6 194 63.4
Rhsim01G0212300 Rhododendron simsii HOM05D004776 ORTHO05D005777 3.8e-56 222.2 227 58.1
Sp5g16230 Schrenkiella parvula HOM05D004776 ORTHO05D005777 3.8e-56 222.2 180 67.8
Ciclev10028099m.g Citrus clementina HOM05D004776 ORTHO05D005777 8.5e-56 221.1 239 54.8
Sc05g0005060 Simmondsia chinensis HOM05D004776 ORTHO05D005777 8.5e-56 221.1 180 67.2
arahy.Tifrunner.gnm1.ann1.MGN1WG Arachis hypogaea HOM05D004776 ORTHO05D005777 1.1e-55 220.7 228 56.1
EL10Ac9g22573 Beta vulgaris HOM05D004776 ORTHO05D005777 1.1e-55 220.7 180 67.8
BcaB05g23422 Brassica carinata HOM05D004776 ORTHO05D005777 1.1e-55 220.7 243 57.2
A05p13030 Brassica napus HOM05D004776 ORTHO05D005777 1.4e-55 220.3 180 66.7
BraA05t20243Z Brassica rapa HOM05D004776 ORTHO05D005777 1.4e-55 220.3 180 66.7
Solyc06g074960.4 Solanum lycopersicum HOM05D004776 ORTHO05D005777 1.4e-55 220.3 180 67.2
Sopen06g031360 Solanum pennellii HOM05D004776 ORTHO05D005777 1.4e-55 220.3 180 67.2
PGSC0003DMG400007163 Solanum tuberosum HOM05D004776 ORTHO05D005777 1.4e-55 220.3 180 67.2
BcaC02g11340 Brassica carinata HOM05D004776 ORTHO05D005777 1.9e-55 219.9 180 66.7
BcaC09g49697 Brassica carinata HOM05D004776 ORTHO05D005777 1.9e-55 219.9 243 56.8
A01p26580 Brassica napus HOM05D004776 ORTHO05D005777 1.9e-55 219.9 243 56.8
C01p33820 Brassica napus HOM05D004776 ORTHO05D005777 1.9e-55 219.9 243 56.8
C04p17380 Brassica napus HOM05D004776 ORTHO05D005777 1.9e-55 219.9 180 66.7
BolC1t03347H Brassica oleracea HOM05D004776 ORTHO05D005777 1.9e-55 219.9 243 56.8
BolC4t23289H Brassica oleracea HOM05D004776 ORTHO05D005777 1.9e-55 219.9 180 66.7
BraA01t02588Z Brassica rapa HOM05D004776 ORTHO05D005777 1.9e-55 219.9 243 56.8
AUR62014926 Chenopodium quinoa HOM05D004776 ORTHO05D005777 1.9e-55 219.9 180 66.7
AUR62029209 Chenopodium quinoa HOM05D004776 ORTHO05D005777 1.9e-55 219.9 180 66.7
CAN.G1755.5 Capsicum annuum HOM05D004776 ORTHO05D005777 2.5e-55 219.5 180 67.2
Atru.chr3.3552 Acer truncatum HOM05D004776 ORTHO05D005777 3.2e-55 219.2 132 81.8
AT3G45040 Arabidopsis thaliana HOM05D004776 ORTHO05D005777 3.2e-55 219.2 243 56.8
Sabra09G0004700 Salix brachista HOM05D004776 ORTHO05D005777 3.2e-55 219.2 217 59.4
arahy.Tifrunner.gnm1.ann1.69IQEU Arachis hypogaea HOM05D004776 ORTHO05D005777 4.2e-55 218.8 228 56.1
Carub.0005s1082 Capsella rubella HOM05D004776 ORTHO05D005777 4.2e-55 218.8 243 56.8
PSO063G2354 Papaver somniferum HOM05D004776 ORTHO05D005777 4.2e-55 218.8 188 63.3
CARHR150930 Cardamine hirsuta HOM05D004776 ORTHO05D005777 9.4e-55 217.6 243 56.4
Cpa.g.sc1.25 Carica papaya HOM05D004776 ORTHO05D005777 1.2e-54 217.2 126 87.3
THA.LOC104799516 Tarenaya hassleriana HOM05D004776 ORTHO05D005777 1.6e-54 216.9 184 65.8
MSTRG.17776 Avicennia marina HOM05D004776 ORTHO05D005777 4.7e-54 215.3 180 65.0
FAN27G1933 Fragaria x ananassa HOM05D004776 ORTHO05D005777 7.9e-54 214.5 135 80.7
Gohir.D13G237900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 1.8e-53 213.4 130 81.5
Aqoxy3G00574 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 5.7e-52 208.4 170 64.1
Nitab4.5_0006015g0020 Nicotiana tabacum HOM05D004776 ORTHO05D005777 5.7e-52 208.4 171 66.1
Aa31LG4G14110 Aethionema arabicum HOM05D004776 ORTHO05D005777 7.4e-52 208.0 132 79.5
Nitab4.5_0000106g0400 Nicotiana tabacum HOM05D004776 ORTHO05D005777 1.7e-51 206.8 175 65.7
BcaNung05690 Brassica carinata HOM05D004776 ORTHO05D005777 4.8e-51 205.3 160 70.0
AL5G23500 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 8.2e-51 204.5 199 59.3
Oeu029897.2 Olea europaea HOM05D004776 ORTHO05D005777 1.2e-49 200.7 293 46.8
SEGI_33157 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 1.6e-49 200.3 198 56.6
Peaxi162Scf01159g00227 Petunia axillaris HOM05D004776 ORTHO05D005777 2.6e-49 199.5 123 79.7
Gohir.1Z049525 Gossypium hirsutum HOM05D004776 ORTHO05D005777 1.0e-48 197.6 130 78.5
Manes.11G150502 Manihot esculenta HOM05D004776 ORTHO05D005777 1.0e-48 197.6 180 63.3
SEGI_23621 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 1.0e-48 197.6 198 55.6
Gohir.A13G232250 Gossypium hirsutum HOM05D004776 ORTHO05D005777 6.5e-48 194.9 130 76.9
MELO3C035466.2 Cucumis melo HOM05D004776 ORTHO05D005777 2.3e-45 186.4 320 42.5
HPP92_025805 Vanilla planifolia HOM05D004776 ORTHO05D005777 3.5e-41 172.6 201 52.2
Lj1A206T59 Lonicera japonica HOM05D004776 ORTHO05D005777 4.5e-41 172.2 209 51.2
Ca_01388_v3 Cicer arietinum L. HOM05D004776 ORTHO05D006187 5.9e-41 171.8 142 66.2
unitig_8.g3670 Utricularia gibba HOM05D004776 ORTHO05D005777 6.1e-38 161.8 189 51.9
Cfa010344 Carpinus fangiana HOM05D004776 ORTHO05D005777 1.5e-36 157.1 134 63.4
FAN05G3839 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.4e-34 149.8 88 81.8
Mapoly0124s0030 Marchantia polymorpha HOM05D004776 ORTHO05D005777 4.1e-34 149.1 192 49.0
Lsat_1_v5_gn_1_63021 Lactuca sativa HOM05D004776 ORTHO05D005777 4.5e-33 145.6 198 48.5
Thhalv10002461m.g Eutrema salsugineum HOM05D004776 ORTHO05D005777 1.1e-31 141.0 121 64.5
FAN07G0780 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.5e-31 140.6 92 73.9
Dinv29356 Davidia involucrata HOM05D004776 ORTHO05D006187 8.8e-29 131.3 176 48.3
MD03G1126100 Malus domestica HOM05D004776 ORTHO05D005777 9.8e-28 127.9 211 43.6
Pp3c13_8200 Physcomitrium patens HOM05D004776 ORTHO05D005777 4.9e-27 125.6 241 38.6
MD00G1033800 Malus domestica HOM05D004776 ORTHO05D005777 1.0e-21 107.8 136 47.8
Zm00001eb232190 Zea mays HOM05D004776 ORTHO05D005777 3.9e-16 89.4 113 48.7
FAN10G3619 Fragaria x ananassa HOM05D004776 ORTHO05D005777 6.6e-16 88.6 52 78.8
Glyma.12G177300 Glycine max HOM05D004776 ORTHO05D005777 9.5e-15 84.7 99 51.5
CBR_g19018 Chara braunii HOM05D000019 ORTHO05D000002 2.1e-14 83.6 128 43.0
Atru.chr3.3551 Acer truncatum HOM05D004776 ORTHO05D005777 2.8e-14 83.2 45 82.2
Migut.N02573 Erythranthe guttata HOM05D004776 ORTHO05D005777 3.1e-13 79.7 91 51.6
MCO11G119 Micromonas commoda HOM05D004776 ORTHO05D005777 7.8e-09 65.1 263 31.6
Cfa026928 Carpinus fangiana HOM05D004776 ORTHO05D005777 1.9e-07 60.5 219 26.0
Cre06.g277700 Chlamydomonas reinhardtii HOM05D004776 ORTHO05D005777 2.8e-06 56.6 123 34.1


User provided reference genes

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