Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1525 Ceratophyllum demersum HOM05D006747 ORTHO05D008384 6.1e-149 530.8 267 100.0
TAR362G0605 Trochodendron aralioides HOM05D006747 ORTHO05D008384 1.5e-102 376.7 260 72.3
GSVIVG01028355001 Vitis vinifera HOM05D006747 ORTHO05D008384 2.1e-101 372.9 264 70.5
ATR0736G001 Amborella trichopoda HOM05D006747 ORTHO05D008384 2.6e-99 365.9 267 68.5
MD05G1195200 Malus domestica HOM05D006747 ORTHO05D008384 2.2e-98 362.8 263 68.4
Dinv22393 Davidia involucrata HOM05D006747 ORTHO05D008384 2.9e-98 362.5 268 69.0
Actinidia30159 Actinidia chinensis HOM05D006747 ORTHO05D008384 7.1e-97 357.8 269 66.9
Cc01_g18210 Coffea canephora HOM05D006747 ORTHO05D008384 1.2e-96 357.1 260 68.5
Cfa002442 Carpinus fangiana HOM05D006747 ORTHO05D008384 3.5e-96 355.5 261 69.0
CSS0000886 Camellia sinensis var. sinensis HOM05D006747 ORTHO05D008384 1.3e-95 353.6 256 68.4
Sabra05G0174300 Salix brachista HOM05D006747 ORTHO05D008384 1.3e-95 353.6 248 71.0
RcHm_v2.0_Chr6g0287851 Rosa chinensis HOM05D006747 ORTHO05D008384 1.7e-95 353.2 264 67.4
MBI07_g16913_MAGBIO Magnolia biondii HOM05D006747 ORTHO05D008384 3.0e-95 352.4 257 68.9
Potri.005G225900 Populus trichocarpa HOM05D006747 ORTHO05D008384 3.9e-95 352.1 248 71.0
Thecc.01G256100 Theobroma cacao HOM05D006747 ORTHO05D008384 1.5e-94 350.1 263 65.8
Atru.chr5.1716 Acer truncatum HOM05D006747 ORTHO05D008384 1.9e-94 349.7 259 67.2
FAN27G0389 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.9e-94 349.7 266 68.0
PSO063G2179 Papaver somniferum HOM05D006747 ORTHO05D008384 4.3e-94 348.6 266 67.7
Rhsim13G0036000 Rhododendron simsii HOM05D006747 ORTHO05D008384 1.6e-93 346.7 240 71.2
Ciclev10021655m.g Citrus clementina HOM05D006747 ORTHO05D008384 2.1e-93 346.3 244 70.1
Duzib138G0743 Durio zibethinus HOM05D006747 ORTHO05D008384 2.8e-93 345.9 250 67.2
Gohir.D11G137550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 2.8e-93 345.9 267 64.4
vmacro02672 Vaccinium macrocarpon HOM05D006747 ORTHO05D008384 3.6e-93 345.5 313 58.5
Gorai.007G147500 Gossypium raimondii HOM05D006747 ORTHO05D008384 4.7e-93 345.1 267 64.0
Migut.D00438 Erythranthe guttata HOM05D006747 ORTHO05D008384 1.4e-92 343.6 237 71.3
Peaxi162Scf00987g00036 Petunia axillaris HOM05D006747 ORTHO05D008384 1.4e-92 343.6 264 65.2
Lj5g0027576 Lotus japonicus HOM05D006747 ORTHO05D008384 1.8e-92 343.2 260 66.2
Aqoxy2G03665 Aquilegia oxysepala HOM05D006747 ORTHO05D008384 2.3e-92 342.8 248 69.0
Gohir.A11G131500 Gossypium hirsutum HOM05D006747 ORTHO05D008384 2.3e-92 342.8 267 63.7
Lalb_Chr06g0170541 Lupinus albus HOM05D006747 ORTHO05D008384 2.3e-92 342.8 270 64.8
FAN15G1911 Fragaria x ananassa HOM05D006747 ORTHO05D008384 5.2e-92 341.7 266 66.2
COL.COLO4_04026 Corchorus olitorius HOM05D006747 ORTHO05D008384 8.9e-92 340.9 300 61.0
Eucgr.B01566 Eucalyptus grandis HOM05D006747 ORTHO05D008384 1.5e-91 340.1 238 70.6
Lsat_1_v5_gn_5_182940 Lactuca sativa HOM05D006747 ORTHO05D008384 2.0e-91 339.7 260 65.4
Solyc06g008350.3 Solanum lycopersicum HOM05D006747 ORTHO05D008384 4.4e-91 338.6 262 66.8
TPR.G35130 Trifolium pratense HOM05D006747 ORTHO05D008384 4.4e-91 338.6 260 64.6
arahy.Tifrunner.gnm1.ann1.EQ4JVG Arachis hypogaea HOM05D006747 ORTHO05D008384 7.6e-91 337.8 260 65.8
FAN20G2892 Fragaria x ananassa HOM05D006747 ORTHO05D008384 9.9e-91 337.4 246 69.1
Sopen06g003200 Solanum pennellii HOM05D006747 ORTHO05D008384 9.9e-91 337.4 262 66.4
arahy.Tifrunner.gnm1.ann1.0525TE Arachis hypogaea HOM05D006747 ORTHO05D008384 1.7e-90 336.7 260 65.4
Manes.12G033600 Manihot esculenta HOM05D006747 ORTHO05D008384 4.9e-90 335.1 227 71.8
CiPaw.03G265900 Carya illinoinensis HOM05D006747 ORTHO05D008384 6.4e-90 334.7 275 64.0
Haze_24648 Corylus avellana HOM05D006747 ORTHO05D008384 6.4e-90 334.7 276 64.1
Medtr1g069790 Medicago truncatula HOM05D006747 ORTHO05D008384 8.4e-90 334.3 260 64.6
Phvul.007G192000 Phaseolus vulgaris HOM05D006747 ORTHO05D008384 8.4e-90 334.3 260 65.4
Psat6g054040 Pisum sativum HOM05D006747 ORTHO05D008384 8.4e-90 334.3 260 64.6
PGSC0003DMG400025504 Solanum tuberosum HOM05D006747 ORTHO05D008384 1.9e-89 333.2 271 64.6
DCAR_012556 Daucus carota HOM05D006747 ORTHO05D008384 2.4e-89 332.8 260 62.7
SalBow4G0984 Salvia bowleyana HOM05D006747 ORTHO05D008384 2.4e-89 332.8 262 64.1
CANSAT01G1212 Cannabis sativa HOM05D006747 ORTHO05D008384 1.2e-88 330.5 258 62.0
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 1.6e-88 330.1 260 63.5
Glyma.06G315300 Glycine max HOM05D006747 ORTHO05D008384 3.5e-88 328.9 268 63.8
AUR62011854 Chenopodium quinoa HOM05D006747 ORTHO05D008384 1.3e-87 327.0 259 63.7
HanXRQChr09g0254271 Helianthus annuus HOM05D006747 ORTHO05D008384 1.7e-87 326.6 253 64.4
MSTRG.21486 Avicennia marina HOM05D006747 ORTHO05D008384 3.0e-87 325.9 241 68.9
SGA_v2.0_scaffold138G35213 Striga asiatica HOM05D006747 ORTHO05D008384 3.0e-87 325.9 255 64.7
Zm00001eb384950 Zea mays HOM05D006747 ORTHO05D008384 7.3e-86 321.2 264 61.7
EL10As5g23483 Beta vulgaris HOM05D006747 ORTHO05D008384 1.6e-85 320.1 245 64.1
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 2.1e-85 319.7 213 72.8
Os07g0458800 Oryza sativa ssp. japonica HOM05D006747 ORTHO05D008384 2.1e-85 319.7 239 66.5
Sp3g33710 Schrenkiella parvula HOM05D006747 ORTHO05D008384 4.7e-85 318.5 243 63.8
Carub.0003s3494 Capsella rubella HOM05D006747 ORTHO05D008384 1.1e-84 317.4 243 64.2
AL3G53500 Arabidopsis lyrata HOM05D006747 ORTHO05D008384 1.5e-83 313.5 243 64.2
BraA07t27816Z Brassica rapa HOM05D006747 ORTHO05D008384 2.6e-83 312.8 243 62.6
THA.LOC104804045 Tarenaya hassleriana HOM05D006747 ORTHO05D008384 7.6e-83 311.2 268 60.4
Thhalv10002060m.g Eutrema salsugineum HOM05D006747 ORTHO05D008384 9.9e-83 310.8 271 58.3
PGR031G3840 Punica granatum HOM05D006747 ORTHO05D008384 9.9e-83 310.8 222 66.7
AT2G20495 Arabidopsis thaliana HOM05D006747 ORTHO05D008384 1.7e-82 310.1 243 63.4
BcaC06g36739 Brassica carinata HOM05D006747 ORTHO05D008384 2.9e-82 309.3 243 61.3
MELO3C012750.2 Cucumis melo HOM05D006747 ORTHO05D008384 3.8e-82 308.9 234 63.7
BolC7t40498H Brassica oleracea HOM05D006747 ORTHO05D008384 1.1e-81 307.4 244 61.5
Nn1g02801 Nelumbo nucifera HOM05D006747 ORTHO05D008384 1.1e-81 307.4 262 63.7
CsaV3_7G027040 Cucumis sativus L. HOM05D006747 ORTHO05D008384 1.9e-81 306.6 234 63.7
C07p00520 Brassica napus HOM05D006747 ORTHO05D008384 3.2e-81 305.8 239 61.5
Sc17g0000600 Simmondsia chinensis HOM05D006747 ORTHO05D008384 4.2e-81 305.4 212 69.3
BcaB03g16845 Brassica carinata HOM05D006747 ORTHO05D008384 9.3e-81 304.3 244 61.5
CARHR111050 Cardamine hirsuta HOM05D006747 ORTHO05D008384 2.7e-80 302.8 238 62.6
AUR62024699 Chenopodium quinoa HOM05D006747 ORTHO05D008384 4.6e-80 302.0 212 68.4
unitig_8.g3882 Utricularia gibba HOM05D006747 ORTHO05D008384 1.0e-79 300.8 263 59.3
Prupe.8G221800 Prunus persica HOM05D006747 ORTHO05D008384 3.0e-79 299.3 264 60.2
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 4.3e-78 295.4 258 57.4
HPP92_014756 Vanilla planifolia HOM05D006747 ORTHO05D008384 3.6e-77 292.4 213 64.8
FAN24G2059 Fragaria x ananassa HOM05D006747 ORTHO05D008384 8.1e-77 291.2 268 59.3
Pp3c11_10320 Physcomitrium patens HOM05D006747 ORTHO05D008384 3.8e-74 282.3 273 54.9
CAN.G941.16 Capsicum annuum HOM05D006747 ORTHO05D008384 6.4e-74 281.6 210 66.2
PSO017G5775 Papaver somniferum HOM05D006747 ORTHO05D008384 8.4e-74 281.2 266 59.0
ECA248G1486 Erigeron canadensis HOM05D006747 ORTHO05D008384 1.4e-73 280.4 241 61.0
A07p00240 Brassica napus HOM05D006747 ORTHO05D008384 1.3e-69 267.3 243 56.8
Hma1.2p1_0273F.1_g109550 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 6.2e-69 265.0 189 68.8
AagrBONN_evm.TU.Sc2ySwM_228.388 Anthoceros agrestis HOM05D006747 ORTHO05D008384 1.7e-66 256.9 249 51.0
Mapoly0024s0028 Marchantia polymorpha HOM05D006747 ORTHO05D008384 4.2e-65 252.3 231 56.3
Oeu035736.1 Olea europaea HOM05D006747 ORTHO05D008384 1.2e-64 250.8 176 68.8
ClCG09G008030 Citrullus lanatus HOM05D006747 ORTHO05D008384 1.3e-63 247.3 410 37.8
Nitab4.5_0000326g0130 Nicotiana tabacum HOM05D006747 ORTHO05D008384 1.5e-62 243.8 240 54.6
Nitab4.5_0005593g0070 Nicotiana tabacum HOM05D006747 ORTHO05D008384 1.8e-60 236.9 218 56.0
HPP92_028089 Vanilla planifolia HOM05D006747 ORTHO05D008384 1.5e-59 233.8 171 64.3
SMO115G0001 Selaginella moellendorffii HOM05D006747 ORTHO05D008384 3.2e-57 226.1 229 50.7
QL09p039580 Quercus lobata HOM05D006747 ORTHO05D008384 4.1e-52 209.1 185 60.5
Sed0026822 Sechium edule HOM05D006747 ORTHO05D008384 1.8e-47 193.7 179 57.5
Ca_09674_v3 Cicer arietinum L. HOM05D006747 ORTHO05D008384 5.0e-42 175.6 163 57.1
FvH4_2g21270 Fragaria vesca HOM05D006747 ORTHO05D008384 2.0e-38 163.7 154 58.4
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 1.0e-34 151.4 90 78.9
SEGI_35883 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 2.6e-30 136.7 89 69.7
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 1.0e-23 114.8 73 69.9
SEGI_30594 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 1.7e-21 107.5 96 52.1
arahy.Tifrunner.gnm1.ann1.K1LLW7 Arachis hypogaea HOM05D006747 ORTHO05D008384 2.2e-18 97.1 61 75.4
Cpa.g.sc165.14 Carica papaya HOM05D006747 ORTHO05D008384 7.2e-17 92.0 76 64.5
Hma1.2p1_0273F.1_g109560 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 1.0e-15 88.2 73 58.9
MD10G1182200 Malus domestica HOM05D006747 ORTHO05D008384 1.4e-15 87.8 70 62.9
SEGI_37670 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 9.1e-12 75.1 51 72.5
Actinidia34415 Actinidia chinensis HOM05D006747 ORTHO05D008384 7.7e-11 72.0 56 58.9
Actinidia34401 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.9e-09 67.4 53 58.5
Duzib133G0415 Durio zibethinus HOM05D006747 ORTHO05D008384 2.5e-09 67.0 49 65.3
Cre07.g348951 Chlamydomonas reinhardtii HOM05D006747 ORTHO05D008384 2.7e-08 63.5 98 29.6
Gohir.A07G213740 Gossypium hirsutum HOM05D006747 ORTHO05D008384 8.8e-07 58.5 150 28.7


User provided reference genes

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