Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 1.4e-36 155.6 72 100.0
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 7.6e-30 133.3 74 82.4
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 6.5e-29 130.2 74 79.7
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 8.4e-29 129.8 74 78.4
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.4e-28 129.0 74 78.4
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.4e-28 129.0 74 78.4
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 3.2e-28 127.9 73 78.1
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 4.2e-28 127.5 74 77.0
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 5.5e-28 127.1 74 78.4
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 7.1e-28 126.7 74 75.7
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 9.3e-28 126.3 74 75.7
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 9.3e-28 126.3 74 75.7
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 9.3e-28 126.3 74 78.4
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 9.3e-28 126.3 74 77.0
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 9.3e-28 126.3 72 79.2
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 1.2e-27 125.9 74 77.0
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 2.7e-27 124.8 74 75.7
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 3.5e-27 124.4 74 75.7
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 7.9e-27 123.2 74 74.3
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 7.9e-27 123.2 74 75.7
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 1.0e-26 122.9 74 77.0
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 1.3e-26 122.5 74 74.3
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 1.8e-26 122.1 74 73.0
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.8e-26 122.1 74 75.7
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.8e-26 122.1 74 75.7
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 6.7e-26 120.2 74 74.3
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 1.1e-25 119.4 72 72.2
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 1.1e-25 119.4 68 75.0
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 1.1e-25 119.4 74 73.0
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 1.1e-25 119.4 71 77.5
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.1e-25 119.4 77 71.4
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 1.5e-25 119.0 70 80.0
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 1.5e-25 119.0 70 80.0
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 1.9e-25 118.6 68 76.5
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 1.9e-25 118.6 68 76.5
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 1.9e-25 118.6 68 76.5
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 2.5e-25 118.2 68 75.0
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 2.5e-25 118.2 73 71.2
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 2.5e-25 118.2 68 79.4
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 2.5e-25 118.2 74 73.0
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 2.5e-25 118.2 68 79.4
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 2.5e-25 118.2 68 79.4
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 3.3e-25 117.9 74 74.3
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 4.3e-25 117.5 74 74.3
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 4.3e-25 117.5 68 75.0
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 4.3e-25 117.5 68 75.0
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 5.7e-25 117.1 74 70.3
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 7.4e-25 116.7 74 71.6
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 9.6e-25 116.3 66 77.3
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 9.6e-25 116.3 74 71.6
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 9.6e-25 116.3 74 71.6
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 9.6e-25 116.3 74 71.6
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 1.3e-24 115.9 73 71.2
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 1.6e-24 115.5 68 73.5
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 2.1e-24 115.2 68 70.6
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 2.8e-24 114.8 66 74.2
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 2.8e-24 114.8 68 75.0
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 2.8e-24 114.8 71 70.4
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 3.7e-24 114.4 73 72.6
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 4.8e-24 114.0 70 74.3
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 4.8e-24 114.0 68 75.0
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 4.8e-24 114.0 68 73.5
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 4.8e-24 114.0 70 71.4
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 6.2e-24 113.6 68 72.1
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 6.2e-24 113.6 68 75.0
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 6.2e-24 113.6 68 70.6
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 6.2e-24 113.6 68 70.6
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 1.1e-23 112.8 68 72.1
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 1.1e-23 112.8 68 73.5
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.1e-23 112.8 71 67.6
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 1.4e-23 112.5 76 68.4
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 1.4e-23 112.5 76 68.4
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 1.4e-23 112.5 68 73.5
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 1.4e-23 112.5 68 69.1
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 1.8e-23 112.1 68 69.1
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 2.4e-23 111.7 68 73.5
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 2.4e-23 111.7 62 75.8
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.4e-23 111.7 66 75.8
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.4e-23 111.7 66 75.8
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 3.1e-23 111.3 62 79.0
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 3.1e-23 111.3 74 64.9
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 3.1e-23 111.3 68 72.1
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 5.3e-23 110.5 68 70.6
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 6.9e-23 110.2 70 68.6
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 6.9e-23 110.2 70 68.6
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 6.9e-23 110.2 60 75.0
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 1.2e-22 109.4 70 67.1
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.2e-22 109.4 70 68.6
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.2e-22 109.4 70 68.6
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 1.2e-22 109.4 70 68.6
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.5e-22 109.0 62 77.4
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 2.0e-22 108.6 66 72.7
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 2.6e-22 108.2 69 69.6
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 2.6e-22 108.2 69 69.6
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 2.6e-22 108.2 69 69.6
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 2.6e-22 108.2 69 69.6
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 2.6e-22 108.2 69 69.6
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 3.4e-22 107.8 68 67.6
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 3.4e-22 107.8 70 67.1
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 4.5e-22 107.5 69 69.6
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 5.8e-22 107.1 69 68.1
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 5.8e-22 107.1 69 68.1
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 5.8e-22 107.1 69 68.1
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 5.8e-22 107.1 69 68.1
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 5.8e-22 107.1 69 68.1
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 5.8e-22 107.1 70 67.1
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 7.6e-22 106.7 70 65.7
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 1.0e-21 106.3 68 70.6
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 1.0e-21 106.3 68 67.6
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 1.0e-21 106.3 68 67.6
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.0e-21 106.3 69 69.6
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 1.3e-21 105.9 69 66.7
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.3e-21 105.9 69 71.0
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 2.2e-21 105.1 70 64.3
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.8e-21 104.4 70 67.1
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 3.8e-21 104.4 68 67.6
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.0e-21 104.0 68 66.2
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 8.4e-21 103.2 68 69.1
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 1.9e-20 102.1 90 56.7
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 2.5e-20 101.7 68 66.2
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 1.6e-19 99.0 88 55.7
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 6.1e-19 97.1 72 62.5
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 1.0e-18 96.3 70 64.3
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 2.3e-18 95.1 50 92.0
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 5.1e-18 94.0 54 74.1
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 6.7e-18 93.6 70 60.0
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 1.1e-17 92.8 55 70.9
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.5e-17 91.7 54 74.1
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 4.3e-17 90.9 56 69.6
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.6e-14 81.6 81 50.6
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 1.4e-12 75.9 51 58.8
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 2.1e-11 72.0 56 50.0
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 2.1e-11 72.0 43 69.8
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 2.8e-08 61.6 184 26.1
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 8.2e-08 60.1 50 58.0
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 2.6e-06 55.1 37 70.3


User provided reference genes

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