Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1446 Ceratophyllum demersum HOM05D003583 ORTHO05D004169 8.2e-85 317.0 158 100.0
Nn1g07991 Nelumbo nucifera HOM05D003583 ORTHO05D004169 4.4e-54 214.9 127 84.3
Nn3g20050 Nelumbo nucifera HOM05D002516 ORTHO05D002703 6.3e-53 211.1 128 82.0
HPP92_003545 Vanilla planifolia HOM05D003583 ORTHO05D004169 4.1e-52 208.4 125 83.2
ATR0561G144 Amborella trichopoda HOM05D003583 ORTHO05D004169 3.5e-51 205.3 123 82.1
Actinidia30051 Actinidia chinensis HOM05D003583 ORTHO05D004169 4.5e-51 204.9 154 71.4
MBI11_g07418_MAGBIO Magnolia biondii HOM05D003583 ORTHO05D004169 4.5e-51 204.9 132 78.8
TAR362G1106 Trochodendron aralioides HOM05D003583 ORTHO05D004169 1.3e-50 203.4 139 72.7
GSVIVG01003252001 Vitis vinifera HOM05D003583 ORTHO05D004169 1.7e-50 203.0 130 76.2
CSS0028584 Camellia sinensis var. sinensis HOM05D003583 ORTHO05D004169 2.9e-50 202.2 123 81.3
Actinidia39429 Actinidia chinensis HOM05D003583 ORTHO05D004169 3.8e-50 201.8 123 80.5
Oeu030584.1 Olea europaea HOM05D003583 ORTHO05D004169 3.8e-50 201.8 123 79.7
Dinv19172 Davidia involucrata HOM05D003583 ORTHO05D004169 6.5e-50 201.1 123 81.3
ECA236G5107 Erigeron canadensis HOM05D003583 ORTHO05D004169 8.5e-50 200.7 124 78.2
SGA_v2.0_scaffold6G03502 Striga asiatica HOM05D003583 ORTHO05D004169 8.5e-50 200.7 123 80.5
EL10Ac7g17902 Beta vulgaris HOM05D003583 ORTHO05D004169 1.1e-49 200.3 123 80.5
Dinv12649 Davidia involucrata HOM05D003583 ORTHO05D004169 1.5e-49 199.9 123 80.5
Migut.N00631 Erythranthe guttata HOM05D003583 ORTHO05D004169 1.5e-49 199.9 123 79.7
SalBow6G4396 Salvia bowleyana HOM05D003583 ORTHO05D004169 1.5e-49 199.9 124 77.4
SalBow6G5082 Salvia bowleyana HOM05D003583 ORTHO05D004169 1.5e-49 199.9 124 77.4
Manes.13G049400 Manihot esculenta HOM05D003583 ORTHO05D004169 1.9e-49 199.5 127 74.8
SalBow3G2553 Salvia bowleyana HOM05D003583 ORTHO05D004169 1.9e-49 199.5 123 80.5
Sopen09g022660 Solanum pennellii HOM05D003583 ORTHO05D004169 1.9e-49 199.5 123 78.9
Potri.002G245900 Populus trichocarpa HOM05D003583 ORTHO05D004169 2.5e-49 199.1 123 79.7
DCAR_018637 Daucus carota HOM05D003583 ORTHO05D004169 3.2e-49 198.7 123 78.0
Lj1A89T66 Lonicera japonica HOM05D003583 ORTHO05D004169 3.2e-49 198.7 154 68.8
Lj1g0010920 Lotus japonicus HOM05D003583 ORTHO05D004169 4.2e-49 198.4 125 79.2
TAR633G0566 Trochodendron aralioides HOM05D003583 ORTHO05D004169 4.2e-49 198.4 127 76.4
Hma1.2p1_0226F.1_g095390 Hydrangea macrophylla HOM05D003583 ORTHO05D004169 7.2e-49 197.6 123 78.0
CANSAT01G0519 Cannabis sativa HOM05D003583 ORTHO05D004169 9.4e-49 197.2 123 78.9
HanXRQChr04g0108021 Helianthus annuus HOM05D003583 ORTHO05D004169 9.4e-49 197.2 124 78.2
Os08g0528900 Oryza sativa ssp. japonica HOM05D003583 ORTHO05D004169 9.4e-49 197.2 163 63.2
Peaxi162Scf00068g02311 Petunia axillaris HOM05D003583 ORTHO05D004169 9.4e-49 197.2 123 78.0
Thecc.01G220200 Theobroma cacao HOM05D003583 ORTHO05D004169 9.4e-49 197.2 127 74.8
vmacro02783 Vaccinium macrocarpon HOM05D003583 ORTHO05D004169 9.4e-49 197.2 123 78.0
Aqoxy5G00027 Aquilegia oxysepala HOM05D003583 ORTHO05D004169 1.2e-48 196.8 135 76.3
Eucgr.K02138 Eucalyptus grandis HOM05D003583 ORTHO05D004169 1.2e-48 196.8 123 78.0
Manes.12G047400 Manihot esculenta HOM05D003583 ORTHO05D004169 1.6e-48 196.4 127 73.2
FvH4_2g18540 Fragaria vesca HOM05D003583 ORTHO05D004169 2.1e-48 196.1 126 76.2
FAN24G2032 Fragaria x ananassa HOM05D003583 ORTHO05D004169 2.1e-48 196.1 126 76.2
Phvul.008G131301 Phaseolus vulgaris HOM05D003583 ORTHO05D004169 2.1e-48 196.1 123 79.7
Sabra02G0187200 Salix brachista HOM05D003583 ORTHO05D004169 2.1e-48 196.1 123 78.0
CAN.G1418.4 Capsicum annuum HOM05D003583 ORTHO05D004169 2.7e-48 195.7 123 78.9
AUR62016547 Chenopodium quinoa HOM05D003583 ORTHO05D004169 2.7e-48 195.7 123 78.0
VMungo1383G2149 Vigna mungo HOM05D003583 ORTHO05D004169 2.7e-48 195.7 123 78.9
RcHm_v2.0_Chr6g0284101 Rosa chinensis HOM05D003583 ORTHO05D004169 3.6e-48 195.3 122 78.7
SGA_v2.0_scaffold3G01637 Striga asiatica HOM05D003583 ORTHO05D004169 3.6e-48 195.3 123 76.4
AUR62001132 Chenopodium quinoa HOM05D003583 ORTHO05D004169 4.7e-48 194.9 123 78.0
Solyc09g059500.3 Solanum lycopersicum HOM05D003583 ORTHO05D004169 4.7e-48 194.9 123 77.2
Lsat_1_v5_gn_5_180820 Lactuca sativa HOM05D003583 ORTHO05D004169 6.1e-48 194.5 161 64.0
Nitab4.5_0001161g0140 Nicotiana tabacum HOM05D003583 ORTHO05D004169 6.1e-48 194.5 123 76.4
Prupe.8G198900 Prunus persica HOM05D003583 ORTHO05D004169 6.1e-48 194.5 123 78.0
Cc01_g16710 Coffea canephora HOM05D003583 ORTHO05D004169 8.0e-48 194.1 150 67.3
COL.COLO4_15618 Corchorus olitorius HOM05D003583 ORTHO05D004169 8.0e-48 194.1 127 74.8
Gohir.A07G199000 Gossypium hirsutum HOM05D003583 ORTHO05D004169 8.0e-48 194.1 127 74.0
Gohir.D07G205500 Gossypium hirsutum HOM05D003583 ORTHO05D004169 8.0e-48 194.1 127 74.0
Gorai.001G231500 Gossypium raimondii HOM05D003583 ORTHO05D004169 8.0e-48 194.1 127 74.0
MD05G1171600 Malus domestica HOM05D003583 ORTHO05D004169 8.0e-48 194.1 123 77.2
Zm00001eb036350 Zea mays HOM05D003583 ORTHO05D004169 8.0e-48 194.1 156 65.4
Solyc06g083350.3 Solanum lycopersicum HOM05D003583 ORTHO05D004169 1.0e-47 193.7 123 78.0
Sopen06g034720 Solanum pennellii HOM05D003583 ORTHO05D004169 1.0e-47 193.7 123 78.0
PGSC0003DMG400020100 Solanum tuberosum HOM05D003583 ORTHO05D004169 1.0e-47 193.7 123 78.9
Glyma.18G160200 Glycine max HOM05D003583 ORTHO05D004169 1.4e-47 193.4 123 77.2
Duzib138G0093 Durio zibethinus HOM05D003583 ORTHO05D004169 1.8e-47 193.0 127 73.2
HanXRQChr01g0015291 Helianthus annuus HOM05D003583 ORTHO05D004169 2.3e-47 192.6 124 75.0
Lalb_Chr19g0125831 Lupinus albus HOM05D003583 ORTHO05D004169 2.3e-47 192.6 123 78.9
Medtr7g055863 Medicago truncatula HOM05D003583 ORTHO05D004169 2.3e-47 192.6 123 77.2
TWI36G1542 Tripterygium wilfordii HOM05D003583 ORTHO05D004169 2.3e-47 192.6 125 76.0
Glyma.08G348400 Glycine max HOM05D003583 ORTHO05D004169 3.0e-47 192.2 123 76.4
MD10G1159800 Malus domestica HOM05D003583 ORTHO05D004169 3.0e-47 192.2 123 77.2
Rhsim13G0047800 Rhododendron simsii HOM05D003583 ORTHO05D004169 4.0e-47 191.8 132 74.2
ClCG07G002090 Citrullus lanatus HOM05D003583 ORTHO05D004169 5.2e-47 191.4 127 77.2
Ciclev10021065m.g Citrus clementina HOM05D003583 ORTHO05D004169 6.8e-47 191.0 147 66.7
Lalb_Chr03g0041471 Lupinus albus HOM05D003583 ORTHO05D004169 6.8e-47 191.0 123 77.2
Cfa004159 Carpinus fangiana HOM05D003583 ORTHO05D004169 8.8e-47 190.7 125 74.4
THA.LOC104822491 Tarenaya hassleriana HOM05D003583 ORTHO05D004169 8.8e-47 190.7 126 73.8
CAN.G874.6 Capsicum annuum HOM05D003583 ORTHO05D004169 1.2e-46 190.3 126 75.4
Ca_03474_v3 Cicer arietinum L. HOM05D003583 ORTHO05D004169 1.2e-46 190.3 123 76.4
Nitab4.5_0003020g0040 Nicotiana tabacum HOM05D003583 ORTHO05D004169 1.2e-46 190.3 128 75.8
TPR.G6446 Trifolium pratense HOM05D003583 ORTHO05D004169 1.2e-46 190.3 123 76.4
CiPaw.02G023700 Carya illinoinensis HOM05D003583 ORTHO05D004169 2.0e-46 189.5 125 73.6
CsaV3_3G030030 Cucumis sativus L. HOM05D003583 ORTHO05D004169 2.0e-46 189.5 127 76.4
MELO3C022717.2 Cucumis melo HOM05D003583 ORTHO05D004169 2.6e-46 189.1 127 76.4
arahy.Tifrunner.gnm1.ann1.6L1LF5 Arachis hypogaea HOM05D003583 ORTHO05D004169 3.4e-46 188.7 118 78.0
Carub.0003s0675 Capsella rubella HOM05D003583 ORTHO05D004169 3.4e-46 188.7 125 73.6
Carub.0003s0679 Capsella rubella HOM05D003583 ORTHO05D004169 3.4e-46 188.7 125 73.6
FAN27G2245 Fragaria x ananassa HOM05D003583 ORTHO05D004169 4.4e-46 188.3 142 68.3
Thhalv10004601m.g Eutrema salsugineum HOM05D003583 ORTHO05D004169 5.7e-46 188.0 128 69.5
PGR044G2014 Punica granatum HOM05D003583 ORTHO05D004169 5.7e-46 188.0 125 75.2
vmacro14733 Vaccinium macrocarpon HOM05D003583 ORTHO05D004169 5.7e-46 188.0 124 75.0
Nitab4.5_0013864g0010 Nicotiana tabacum HOM05D003583 ORTHO05D004169 9.8e-46 187.2 122 75.4
CARHR081870 Cardamine hirsuta HOM05D003583 ORTHO05D004169 1.3e-45 186.8 125 72.8
Thhalv10021140m.g Eutrema salsugineum HOM05D003583 ORTHO05D004169 1.7e-45 186.4 125 72.8
AT3G07220 Arabidopsis thaliana HOM05D003583 ORTHO05D004169 2.2e-45 186.0 125 72.0
BcaC05g29745 Brassica carinata HOM05D003583 ORTHO05D004169 3.7e-45 185.3 125 72.8
AL3G18500 Arabidopsis lyrata HOM05D003583 ORTHO05D004169 4.8e-45 184.9 125 72.0
Nitab4.5_0000045g0500 Nicotiana tabacum HOM05D003583 ORTHO05D004169 4.8e-45 184.9 145 66.2
arahy.Tifrunner.gnm1.ann1.SP3ESK Arachis hypogaea HOM05D003583 ORTHO05D004169 6.3e-45 184.5 113 78.8
Duzib211G0612 Durio zibethinus HOM05D003583 ORTHO05D004169 6.3e-45 184.5 122 73.0
FAN15G2515 Fragaria x ananassa HOM05D003583 ORTHO05D004169 6.3e-45 184.5 137 69.3
Aa31LG5G17810 Aethionema arabicum HOM05D003583 ORTHO05D004169 1.1e-44 183.7 125 72.8
CDE06G0189 Ceratophyllum demersum HOM05D003583 ORTHO05D004169 1.1e-44 183.7 91 98.9
TWI75G1818 Tripterygium wilfordii HOM05D003583 ORTHO05D004169 1.1e-44 183.7 125 73.6
C05p60140 Brassica napus HOM05D003583 ORTHO05D004169 1.4e-44 183.3 125 72.0
SEGI_31201 Sequoiadendron giganteum HOM05D003583 ORTHO05D004169 1.8e-44 183.0 123 70.7
A05p40990 Brassica napus HOM05D003583 ORTHO05D004169 2.4e-44 182.6 125 72.0
Sc05g0001940 Simmondsia chinensis HOM05D003583 ORTHO05D004169 3.1e-44 182.2 126 69.0
Rhsim01G0252900 Rhododendron simsii HOM05D003583 ORTHO05D004169 5.4e-44 181.4 121 75.2
Sp2g19040 Schrenkiella parvula HOM05D003583 ORTHO05D004169 5.4e-44 181.4 125 71.2
Sed0008761 Sechium edule HOM05D003583 ORTHO05D004169 5.4e-44 181.4 123 78.0
Hund05577 Selenicereus undatus HOM05D003583 ORTHO05D004169 9.1e-44 180.6 123 71.5
Sed0011833 Sechium edule HOM05D003583 ORTHO05D004169 1.2e-43 180.3 147 66.7
Sp3g06180 Schrenkiella parvula HOM05D003583 ORTHO05D004169 2.7e-43 179.1 117 72.6
MSTRG.17995 Avicennia marina HOM05D003583 ORTHO05D004169 3.5e-43 178.7 123 71.5
BcaC04g23769 Brassica carinata HOM05D003583 ORTHO05D004169 4.5e-43 178.3 125 71.2
A09p04570 Brassica napus HOM05D003583 ORTHO05D004169 4.5e-43 178.3 125 71.2
C09p04880 Brassica napus HOM05D003583 ORTHO05D004169 4.5e-43 178.3 125 71.2
BolC9t53416H Brassica oleracea HOM05D003583 ORTHO05D004169 4.5e-43 178.3 125 71.2
BraA09t36092Z Brassica rapa HOM05D003583 ORTHO05D004169 4.5e-43 178.3 125 71.2
BcaB04g19581 Brassica carinata HOM05D003583 ORTHO05D004169 3.8e-42 175.3 125 70.4
SEGI_22924 Sequoiadendron giganteum HOM05D003583 ORTHO05D004169 5.0e-42 174.9 124 70.2
unitig_0.g373 Utricularia gibba HOM05D003583 ORTHO05D004169 8.5e-42 174.1 157 61.8
AL3G18560 Arabidopsis lyrata HOM05D003583 ORTHO05D004169 1.9e-41 172.9 133 65.4
BcaC05g29851 Brassica carinata HOM05D003583 ORTHO05D004169 1.9e-41 172.9 118 70.3
Gohir.A08G195500 Gossypium hirsutum HOM05D003583 ORTHO05D004169 2.5e-41 172.6 127 67.7
BolC5t34665H Brassica oleracea HOM05D003583 ORTHO05D004169 3.2e-41 172.2 116 70.7
BraA05t22826Z Brassica rapa HOM05D003583 ORTHO05D004169 5.5e-41 171.4 116 70.7
PSO017G0014 Papaver somniferum HOM05D003583 ORTHO05D004169 6.8e-39 164.5 123 66.7
PSO063G4910 Papaver somniferum HOM05D003583 ORTHO05D004169 6.8e-39 164.5 123 66.7
QL09p051234 Quercus lobata HOM05D003583 ORTHO05D004169 8.3e-37 157.5 201 46.8
Os11g0463600 Oryza sativa ssp. japonica HOM05D003583 ORTHO05D004169 5.9e-35 151.4 119 62.2
Zm00001eb169940 Zea mays HOM05D003583 ORTHO05D004169 4.0e-31 138.7 100 67.0
Gohir.D08G212800 Gossypium hirsutum HOM05D003583 ORTHO05D004169 5.7e-30 134.8 98 65.3
Lalb_Chr19g0125851 Lupinus albus HOM05D003583 ORTHO05D004169 9.8e-30 134.0 130 54.6
Haze_15252 Corylus avellana HOM05D003583 ORTHO05D004169 3.2e-28 129.0 123 56.9
Lalb_Chr03g0041461 Lupinus albus HOM05D003583 ORTHO05D004169 3.3e-25 119.0 123 48.8
Mapoly0037s0072 Marchantia polymorpha HOM05D003583 ORTHO05D004169 9.5e-25 117.5 144 44.4
Gorai.004G226900 Gossypium raimondii HOM05D003583 ORTHO05D004169 1.4e-23 113.6 86 64.0
HPP92_008214 Vanilla planifolia HOM05D003583 ORTHO05D004169 1.5e-22 110.2 89 55.1
SMO166G0009 Selaginella moellendorffii HOM05D003583 ORTHO05D004169 3.7e-21 105.5 101 50.5
Zm00001eb115380 Zea mays HOM05D003583 ORTHO05D004169 6.4e-21 104.8 115 44.3
SMO115G0166 Selaginella moellendorffii HOM05D003583 ORTHO05D004169 8.3e-21 104.4 99 49.5
Cpa.g.sc34.102 Carica papaya HOM05D003583 ORTHO05D004169 3.9e-18 95.5 68 70.6
BcaB08g36000 Brassica carinata HOM05D003583 ORTHO05D004169 7.3e-17 91.3 62 64.5
Nn6g33306 Nelumbo nucifera HOM05D003583 ORTHO05D004169 7.3e-17 91.3 72 62.5
Atru.chr6.1424 Acer truncatum HOM05D003583 ORTHO05D004169 9.5e-17 90.9 81 59.3
Psat3g148960 Pisum sativum HOM05D003583 ORTHO05D004169 4.0e-15 85.5 52 76.9
Rhsim01G0253000 Rhododendron simsii HOM05D003583 ORTHO05D004169 6.8e-15 84.7 60 70.0
Nn7g37781 Nelumbo nucifera HOM05D003583 ORTHO05D004169 8.9e-15 84.3 96 51.0
Nn2g10533 Nelumbo nucifera HOM05D003583 ORTHO05D004169 3.7e-13 79.0 72 55.6
Pp3c23_3920 Physcomitrium patens HOM05D003583 ORTHO05D004169 8.3e-13 77.8 122 34.4
Gohir.A04G076300 Gossypium hirsutum HOM05D003583 ORTHO05D004169 1.9e-12 76.6 57 63.2
Os09g0505200 Oryza sativa ssp. japonica HOM05D003583 ORTHO05D004169 7.1e-12 74.7 98 37.8
Pp3c24_8070 Physcomitrium patens HOM05D003583 ORTHO05D004169 4.6e-11 72.0 100 35.0
Pp3c23_9360 Physcomitrium patens HOM05D003583 ORTHO05D004169 2.3e-10 69.7 100 37.0
Pp3c20_16530 Physcomitrium patens HOM05D003583 ORTHO05D004169 5.1e-10 68.6 124 32.3
Oeu029228.1 Olea europaea HOM05D001181 ORTHO05D001678 3.6e-08 62.4 39 66.7
CBR_g31665 Chara braunii HOM05D003583 ORTHO05D004169 1.1e-07 60.8 128 28.9


User provided reference genes

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