Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1435 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 1.2e-74 283.1 144 100.0
CDE04G0884 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 2.2e-68 262.3 140 93.6
PSO447G0346 Papaver somniferum HOM05D003420 ORTHO05D003970 9.1e-67 256.9 140 90.7
PSO210G4421 Papaver somniferum HOM05D003420 ORTHO05D003970 3.5e-66 255.0 140 90.0
Glyma.01G140600 Glycine max HOM05D003420 ORTHO05D003970 7.7e-66 253.8 140 90.0
Glyma.03G026900 Glycine max HOM05D003420 ORTHO05D003970 7.7e-66 253.8 140 90.0
QL02p034947 Quercus lobata HOM05D003420 ORTHO05D003970 1.0e-65 253.4 140 90.0
Phvul.010G082700 Phaseolus vulgaris HOM05D003420 ORTHO05D003970 1.7e-65 252.7 140 89.3
VMungo0331G1041 Vigna mungo HOM05D003420 ORTHO05D003970 1.7e-65 252.7 140 89.3
Lalb_Chr19g0129871 Lupinus albus HOM05D003420 ORTHO05D003970 3.8e-65 251.5 140 88.6
Ciclev10000376m.g Citrus clementina HOM05D003420 ORTHO05D003970 5.0e-65 251.1 140 88.6
PGR102G1634 Punica granatum HOM05D003420 ORTHO05D003970 5.0e-65 251.1 140 88.6
Cfa018227 Carpinus fangiana HOM05D003420 ORTHO05D003970 6.5e-65 250.8 140 88.6
Haze_17875 Corylus avellana HOM05D003420 ORTHO05D003970 6.5e-65 250.8 140 88.6
Lalb_Chr01g0009891 Lupinus albus HOM05D003420 ORTHO05D003970 6.5e-65 250.8 140 87.9
Medtr4g024570 Medicago truncatula HOM05D003420 ORTHO05D003970 6.5e-65 250.8 140 87.9
Ca_19959_v3 Cicer arietinum L. HOM05D003420 ORTHO05D003970 8.6e-65 250.4 140 87.9
Lj4g0005231 Lotus japonicus HOM05D003420 ORTHO05D003970 8.6e-65 250.4 140 87.9
GSVIVG01022846001 Vitis vinifera HOM05D003420 ORTHO05D003970 8.6e-65 250.4 140 88.6
GSVIVG01038535001 Vitis vinifera HOM05D003420 ORTHO05D003970 8.6e-65 250.4 140 88.6
Ciclev10000395m.g Citrus clementina HOM05D003420 ORTHO05D003970 1.1e-64 250.0 140 87.9
CANSAT25G1859 Cannabis sativa HOM05D003420 ORTHO05D003970 1.5e-64 249.6 140 88.6
TAR625G1262 Trochodendron aralioides HOM05D003420 ORTHO05D003970 1.9e-64 249.2 140 87.9
Manes.18G097100 Manihot esculenta HOM05D003420 ORTHO05D003970 2.5e-64 248.8 140 87.9
AL2G31400 Arabidopsis lyrata HOM05D003420 ORTHO05D003970 3.3e-64 248.4 140 87.9
AT1G71820 Arabidopsis thaliana HOM05D003420 ORTHO05D003970 3.3e-64 248.4 140 87.9
Carub.0002s1858 Capsella rubella HOM05D003420 ORTHO05D003970 3.3e-64 248.4 140 87.9
CARHR290940 Cardamine hirsuta HOM05D003420 ORTHO05D003970 3.3e-64 248.4 140 87.9
ClCG08G008720 Citrullus lanatus HOM05D003420 ORTHO05D003970 3.3e-64 248.4 140 87.1
Thhalv10018180m.g Eutrema salsugineum HOM05D003420 ORTHO05D003970 3.3e-64 248.4 140 87.9
Glyma.03G026100 Glycine max HOM05D003420 ORTHO05D003970 3.3e-64 248.4 138 87.7
Sp5g26850 Schrenkiella parvula HOM05D003420 ORTHO05D003970 3.3e-64 248.4 140 87.9
SpUn0020_0120 Schrenkiella parvula HOM05D003420 ORTHO05D003970 3.3e-64 248.4 140 87.9
MELO3C019945.2 Cucumis melo HOM05D003420 ORTHO05D003970 4.2e-64 248.1 140 87.1
CsaV3_6G004750 Cucumis sativus L. HOM05D003420 ORTHO05D003970 4.2e-64 248.1 140 87.1
FvH4_6g24280 Fragaria vesca HOM05D003420 ORTHO05D003970 4.2e-64 248.1 140 86.4
FAN14G5243 Fragaria x ananassa HOM05D003420 ORTHO05D003970 4.2e-64 248.1 140 86.4
Glyma.03G026400 Glycine max HOM05D003420 ORTHO05D003970 4.2e-64 248.1 143 86.0
Prupe.4G277400 Prunus persica HOM05D003420 ORTHO05D003970 4.2e-64 248.1 140 86.4
THA.LOC104800101 Tarenaya hassleriana HOM05D003420 ORTHO05D003970 4.2e-64 248.1 140 87.1
CiPaw.15G007400 Carya illinoinensis HOM05D003420 ORTHO05D003970 5.5e-64 247.7 138 88.4
CiPaw.15G007500 Carya illinoinensis HOM05D003420 ORTHO05D003970 5.5e-64 247.7 138 88.4
Oeu027630.1 Olea europaea HOM05D003420 ORTHO05D003970 5.5e-64 247.7 137 89.1
Sed0005269 Sechium edule HOM05D003420 ORTHO05D003970 5.5e-64 247.7 140 87.1
Sc02g0003530 Simmondsia chinensis HOM05D003420 ORTHO05D003970 5.5e-64 247.7 140 86.4
Aa31LG4G8810 Aethionema arabicum HOM05D003420 ORTHO05D003970 7.2e-64 247.3 137 89.1
MBI02_g44124_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 7.2e-64 247.3 140 87.1
arahy.Tifrunner.gnm1.ann1.GQ31QR Arachis hypogaea HOM05D003420 ORTHO05D003970 9.5e-64 246.9 140 86.4
arahy.Tifrunner.gnm1.ann1.PV9APJ Arachis hypogaea HOM05D003420 ORTHO05D003970 9.5e-64 246.9 140 86.4
FAN02G2135 Fragaria x ananassa HOM05D003420 ORTHO05D003970 9.5e-64 246.9 140 85.7
Psat7g231160 Pisum sativum HOM05D003420 ORTHO05D003970 9.5e-64 246.9 140 86.4
TWI32G0430 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 9.5e-64 246.9 140 87.1
MSTRG.963 Avicennia marina HOM05D003420 ORTHO05D003970 1.2e-63 246.5 140 86.4
BcaC08g46613 Brassica carinata HOM05D003420 ORTHO05D003970 1.2e-63 246.5 140 87.1
MD14G1071700 Malus domestica HOM05D003420 ORTHO05D003970 1.2e-63 246.5 140 85.7
Potri.013G117400 Populus trichocarpa HOM05D003420 ORTHO05D003970 1.2e-63 246.5 140 85.7
RcHm_v2.0_Chr3g0482841 Rosa chinensis HOM05D003420 ORTHO05D003970 1.2e-63 246.5 140 85.7
Thecc.01G140700 Theobroma cacao HOM05D003420 ORTHO05D003970 1.2e-63 246.5 140 86.4
Atru.chr13.1894 Acer truncatum HOM05D003420 ORTHO05D003970 1.6e-63 246.1 140 86.4
Aqoxy2G01386 Aquilegia oxysepala HOM05D003420 ORTHO05D003970 1.6e-63 246.1 138 87.0
A07p37970 Brassica napus HOM05D003420 ORTHO05D003970 2.8e-63 245.4 137 88.3
C06p45890 Brassica napus HOM05D003420 ORTHO05D003970 2.8e-63 245.4 137 88.3
Duzib187G1187 Durio zibethinus HOM05D003420 ORTHO05D003970 2.8e-63 245.4 140 85.7
Eucgr.F04156 Eucalyptus grandis HOM05D003420 ORTHO05D003970 3.6e-63 245.0 140 86.4
RcHm_v2.0_Chr1g0335051 Rosa chinensis HOM05D003420 ORTHO05D003970 3.6e-63 245.0 138 85.5
Potri.019G088100 Populus trichocarpa HOM05D003420 ORTHO05D003970 4.7e-63 244.6 140 85.0
QL05p025121 Quercus lobata HOM05D003420 ORTHO05D003970 4.7e-63 244.6 140 86.4
QL05p046655 Quercus lobata HOM05D003420 ORTHO05D003970 4.7e-63 244.6 140 86.4
SGA_v2.0_scaffold48G18027 Striga asiatica HOM05D003420 ORTHO05D003970 4.7e-63 244.6 140 85.7
Actinidia22448 Actinidia chinensis HOM05D003420 ORTHO05D003970 8.0e-63 243.8 140 86.4
CSS0045751 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 8.0e-63 243.8 140 85.0
Haze_13387 Corylus avellana HOM05D003420 ORTHO05D003970 8.0e-63 243.8 140 86.4
Sabra19G0098400 Salix brachista HOM05D003420 ORTHO05D003970 8.0e-63 243.8 140 83.6
Sabra19G0101900 Salix brachista HOM05D003420 ORTHO05D003970 8.0e-63 243.8 140 83.6
DCAR_013169 Daucus carota HOM05D003420 ORTHO05D003970 1.0e-62 243.4 141 85.8
Atru.chr6.1390 Acer truncatum HOM05D003420 ORTHO05D003970 1.4e-62 243.0 138 84.8
Migut.C00172 Erythranthe guttata HOM05D003420 ORTHO05D003970 1.4e-62 243.0 140 85.7
Sabra13G0099500 Salix brachista HOM05D003420 ORTHO05D003970 1.4e-62 243.0 140 84.3
Cpa.g.sc66.125 Carica papaya HOM05D003420 ORTHO05D003970 2.3e-62 242.3 137 86.9
Gohir.A10G068000 Gossypium hirsutum HOM05D003420 ORTHO05D003970 2.3e-62 242.3 140 85.0
Gohir.D10G107600 Gossypium hirsutum HOM05D003420 ORTHO05D003970 2.3e-62 242.3 140 85.0
Gorai.011G117900 Gossypium raimondii HOM05D003420 ORTHO05D003970 2.3e-62 242.3 140 85.0
BcaB03g15619 Brassica carinata HOM05D003420 ORTHO05D003970 3.0e-62 241.9 140 85.7
BcaC08g45755 Brassica carinata HOM05D003420 ORTHO05D003970 3.0e-62 241.9 140 85.7
A07p30580 Brassica napus HOM05D003420 ORTHO05D003970 3.0e-62 241.9 140 85.7
Hma1.2p1_0276F.1_g111220 Hydrangea macrophylla HOM05D003420 ORTHO05D003970 3.0e-62 241.9 138 86.2
Atru.chr13.1960 Acer truncatum HOM05D003420 ORTHO05D003970 4.0e-62 241.5 136 86.0
CSS0008854 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 5.2e-62 241.1 140 84.3
C06p35360 Brassica napus HOM05D003420 ORTHO05D003970 6.8e-62 240.7 137 86.9
BolC6t38641H Brassica oleracea HOM05D003420 ORTHO05D003970 6.8e-62 240.7 137 86.9
TPR.G31331 Trifolium pratense HOM05D003420 ORTHO05D003970 8.9e-62 240.4 131 89.3
Manes.02G187400 Manihot esculenta HOM05D003420 ORTHO05D003970 1.5e-61 239.6 138 83.3
AUR62027528 Chenopodium quinoa HOM05D003420 ORTHO05D003970 2.0e-61 239.2 137 84.7
Nitab4.5_0001307g0060 Nicotiana tabacum HOM05D003420 ORTHO05D003970 3.4e-61 238.4 140 82.9
Nitab4.5_0002608g0090 Nicotiana tabacum HOM05D003420 ORTHO05D003970 3.4e-61 238.4 140 82.9
Cc10_g06190 Coffea canephora HOM05D003420 ORTHO05D003970 7.5e-61 237.3 140 82.9
Zm00001eb254950 Zea mays HOM05D003420 ORTHO05D003970 7.5e-61 237.3 138 83.3
Peaxi162Scf00226g00925 Petunia axillaris HOM05D003420 ORTHO05D003970 9.8e-61 236.9 140 82.1
ATR0815G027 Amborella trichopoda HOM05D003420 ORTHO05D003970 1.3e-60 236.5 140 82.9
CAN.G1010.15 Capsicum annuum HOM05D003420 ORTHO05D003970 2.8e-60 235.3 140 81.4
ECA246G4467 Erigeron canadensis HOM05D003420 ORTHO05D003970 2.8e-60 235.3 138 81.9
Rhsim05G0166700 Rhododendron simsii HOM05D003420 ORTHO05D003970 2.8e-60 235.3 141 80.9
Sopen04g028480 Solanum pennellii HOM05D003420 ORTHO05D003970 4.9e-60 234.6 140 81.4
Actinidia15626 Actinidia chinensis HOM05D003420 ORTHO05D003970 1.1e-59 233.4 138 83.3
Migut.C00145 Erythranthe guttata HOM05D003420 ORTHO05D003970 1.1e-59 233.4 140 81.4
Solyc04g072290.3 Solanum lycopersicum HOM05D003420 ORTHO05D003970 1.8e-59 232.6 140 80.7
Lsat_1_v5_gn_6_100921 Lactuca sativa HOM05D003420 ORTHO05D003970 2.4e-59 232.3 140 79.3
HanXRQChr10g0278771 Helianthus annuus HOM05D003420 ORTHO05D003970 2.0e-58 229.2 140 80.7
HPP92_002340 Vanilla planifolia HOM05D003420 ORTHO05D003970 7.8e-58 227.3 130 84.6
Hund17515 Selenicereus undatus HOM05D003420 ORTHO05D003970 1.7e-57 226.1 127 85.8
HanXRQChr10g0278751 Helianthus annuus HOM05D003420 ORTHO05D003970 2.3e-57 225.7 138 78.3
SMO298G0019 Selaginella moellendorffii HOM05D003420 ORTHO05D003970 4.3e-56 221.5 138 76.1
unitig_46.g18008 Utricularia gibba HOM05D003420 ORTHO05D003970 7.3e-56 220.7 139 75.5
EL10Ac8g19742 Beta vulgaris HOM05D003420 ORTHO05D003970 1.2e-55 219.9 127 82.7
Mapoly0001s0359 Marchantia polymorpha HOM05D003420 ORTHO05D003970 1.8e-54 216.1 138 73.2
BraA07t31362Z Brassica rapa HOM05D003420 ORTHO05D003970 3.0e-54 215.3 119 88.2
Psat4g195800 Pisum sativum HOM05D003420 ORTHO05D003970 4.0e-54 214.9 140 75.7
Ah.09g232700 Amaranthus hybridus HOM05D003420 ORTHO05D003970 5.2e-54 214.5 124 83.9
Oeu042182.1 Olea europaea HOM05D003420 ORTHO05D003970 6.8e-54 214.2 118 88.1
Lj4C710G5 Lonicera japonica HOM05D003420 ORTHO05D003970 8.9e-54 213.8 118 88.1
BolC6t39641H Brassica oleracea HOM05D003420 ORTHO05D003970 3.4e-53 211.8 118 87.3
SEGI_39176 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 5.8e-53 211.1 127 80.3
BraA07t30693Z Brassica rapa HOM05D003420 ORTHO05D003970 7.5e-53 210.7 119 86.6
MBI05_g43692_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 4.6e-50 201.4 118 83.1
Pp3c8_3920 Physcomitrium patens HOM05D003420 ORTHO05D003970 6.0e-50 201.1 137 68.6
Migut.C00173 Erythranthe guttata HOM05D003420 ORTHO05D003970 6.6e-49 197.6 142 69.7
MBI05_g36581_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 6.6e-49 197.6 118 81.4
DCAR_009600 Daucus carota HOM05D003420 ORTHO05D003970 2.5e-48 195.7 122 75.4
SHI09126 Sapria himalayana HOM05D003420 ORTHO05D003970 5.6e-48 194.5 126 75.4
Cc00_g30250 Coffea canephora HOM05D003420 ORTHO05D003970 4.7e-47 191.4 121 76.0
MBI05_g36592_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 1.1e-46 190.3 118 79.7
HanXRQChr01g0002061 Helianthus annuus HOM05D003420 ORTHO05D003970 3.1e-46 188.7 153 66.0
Atru.chr7.57 Acer truncatum HOM05D003420 ORTHO05D003970 7.5e-45 184.1 136 69.9
vmacro11081 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 1.3e-44 183.3 128 73.4
FAN05G2825 Fragaria x ananassa HOM05D003420 ORTHO05D003970 3.3e-40 168.7 140 66.4
AagrBONN_evm.TU.Sc2ySwM_228.2748 Anthoceros agrestis HOM05D003420 ORTHO05D003970 6.0e-34 147.9 138 56.5
CBR_g30506 Chara braunii HOM05D003420 ORTHO05D003970 1.7e-33 146.4 138 47.1
BolC6t38648H Brassica oleracea HOM05D003420 ORTHO05D003970 2.1e-31 139.4 120 62.5
AUR62030227 Chenopodium quinoa HOM05D003420 ORTHO05D003970 8.1e-31 137.5 77 87.0
Sc02g0003480 Simmondsia chinensis HOM05D003420 ORTHO05D003970 9.9e-29 130.6 75 85.3
Nn8g40471 Nelumbo nucifera HOM05D003420 ORTHO05D003970 1.3e-25 120.2 72 80.6
Glyma.03G026300 Glycine max HOM05D003420 ORTHO05D003970 1.6e-23 113.2 87 69.0
SEGI_29399 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 2.4e-19 99.4 109 50.5
AagrBONN_evm.TU.Sc2ySwM_117.1498 Anthoceros agrestis HOM05D003420 ORTHO05D003970 3.9e-17 92.0 78 55.1
MBI02_g35947_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 8.1e-15 84.3 48 91.7
Cre17.g744847 Chlamydomonas reinhardtii HOM05D003420 ORTHO05D003970 4.5e-13 78.6 110 40.9
MCO11G044 Micromonas commoda HOM05D003420 ORTHO05D003970 5.3e-06 55.1 55 43.6


User provided reference genes

Program Settings