Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1416 Ceratophyllum demersum HOM05D000843 ORTHO05D000698 2.0e-158 562.4 277 100.0
CDE07G1508 Ceratophyllum demersum HOM05D000843 ORTHO05D000698 1.5e-121 439.9 403 61.3
MBI01_g15750_MAGBIO Magnolia biondii HOM05D000843 ORTHO05D000698 2.2e-16 90.5 289 28.4
Nn2g15574 Nelumbo nucifera HOM05D000843 ORTHO05D000698 3.7e-16 89.7 315 27.0
QL01p006143 Quercus lobata HOM05D000843 ORTHO05D000698 7.3e-12 75.5 310 25.2
Nn7g36062 Nelumbo nucifera HOM05D000843 ORTHO05D000698 1.2e-11 74.7 315 24.4
CSS0039965 Camellia sinensis var. sinensis HOM05D000843 ORTHO05D000698 2.1e-11 73.9 141 33.3
CSS0029751 Camellia sinensis var. sinensis HOM05D000843 ORTHO05D000698 6.1e-11 72.4 141 32.6
Potri.001G015900 Populus trichocarpa HOM05D000843 ORTHO05D000698 6.8e-10 68.9 115 36.5
BcaB05g24811 Brassica carinata HOM05D000843 ORTHO05D000698 2.0e-09 67.4 133 33.8
Manes.14G014100 Manihot esculenta HOM05D000843 ORTHO05D000698 2.6e-09 67.0 131 35.1
Eucgr.B03664 Eucalyptus grandis HOM05D000843 ORTHO05D000698 4.4e-09 66.2 81 42.0
Sabra01G0011100 Salix brachista HOM05D000843 ORTHO05D000698 4.4e-09 66.2 115 34.8
Manes.06G168800 Manihot esculenta HOM05D000843 ORTHO05D000698 7.5e-09 65.5 153 32.7
arahy.Tifrunner.gnm1.ann1.798WTR Arachis hypogaea HOM05D000843 ORTHO05D000698 9.8e-09 65.1 113 36.3
Potri.003G210500 Populus trichocarpa HOM05D000843 ORTHO05D000698 9.8e-09 65.1 157 30.6
Rhsim01G0189500 Rhododendron simsii HOM05D000843 ORTHO05D000698 1.3e-08 64.7 138 34.8
TWI60G0275 Tripterygium wilfordii HOM05D000843 ORTHO05D000698 1.3e-08 64.7 148 32.4
TWI32G0588 Tripterygium wilfordii HOM05D000843 ORTHO05D000698 2.9e-08 63.5 148 32.4
A07p39590 Brassica napus HOM05D000843 ORTHO05D000698 3.7e-08 63.2 150 31.3
BraA07t31508Z Brassica rapa HOM05D000843 ORTHO05D000698 3.7e-08 63.2 150 31.3
CiPaw.13G165200 Carya illinoinensis HOM05D000843 ORTHO05D000698 3.7e-08 63.2 121 33.9
Ciclev10015261m.g Citrus clementina HOM05D000843 ORTHO05D000698 3.7e-08 63.2 145 31.0
Lalb_Chr14g0372281 Lupinus albus HOM05D000843 ORTHO05D000698 4.9e-08 62.8 112 36.6
Prupe.6G018200 Prunus persica HOM05D000843 ORTHO05D000698 4.9e-08 62.8 147 31.3
Zm00001eb316730 Zea mays HOM05D000843 ORTHO05D000698 4.9e-08 62.8 160 33.8
Rhsim13G0225200 Rhododendron simsii HOM05D000843 ORTHO05D000698 6.4e-08 62.4 168 29.2
Carub.0002s2048 Capsella rubella HOM05D000843 ORTHO05D000698 1.1e-07 61.6 151 31.8
COL.COLO4_09900 Corchorus olitorius HOM05D000843 ORTHO05D000698 1.1e-07 61.6 117 34.2
Cfa013097 Carpinus fangiana HOM05D000843 ORTHO05D000698 1.4e-07 61.2 119 33.6
Dinv08049 Davidia involucrata HOM05D000843 ORTHO05D000698 1.4e-07 61.2 85 37.6
Atru.chr3.2514 Acer truncatum HOM05D000843 ORTHO05D000698 1.8e-07 60.8 107 34.6
Duzib168G0956 Durio zibethinus HOM05D000843 ORTHO05D000698 1.8e-07 60.8 117 35.9
MD11G1022400 Malus domestica HOM05D000843 ORTHO05D000698 1.8e-07 60.8 77 42.9
ATR0605G094 Amborella trichopoda HOM05D000843 ORTHO05D000698 2.4e-07 60.5 154 29.2
Sabra03G0153600 Salix brachista HOM05D000843 ORTHO05D000698 3.2e-07 60.1 147 29.3
Ca_01273_v3 Cicer arietinum L. HOM05D000843 ORTHO05D000698 4.1e-07 59.7 114 36.0
Glyma.13G342500 Glycine max HOM05D000843 ORTHO05D000698 5.4e-07 59.3 125 30.4
Sc16g0011700 Simmondsia chinensis HOM05D000843 ORTHO05D000698 5.4e-07 59.3 113 34.5
Cfa009700 Carpinus fangiana HOM05D000843 ORTHO05D000698 7.0e-07 58.9 119 32.8
Glyma.15G031800 Glycine max HOM05D000843 ORTHO05D000698 7.0e-07 58.9 125 31.2
HanXRQChr13g0403931 Helianthus annuus HOM05D000843 ORTHO05D000698 7.0e-07 58.9 119 31.1
BcaB03g15726 Brassica carinata HOM05D000843 ORTHO05D000698 9.2e-07 58.5 148 29.1
MBI04_g14275_MAGBIO Magnolia biondii HOM05D000843 ORTHO05D000698 9.2e-07 58.5 269 23.4
PSO384G4373 Papaver somniferum HOM05D000843 ORTHO05D000698 9.2e-07 58.5 112 31.2
C06p47880 Brassica napus HOM05D000843 ORTHO05D000698 1.2e-06 58.2 148 30.4
BolC6t39823H Brassica oleracea HOM05D000843 ORTHO05D000698 1.2e-06 58.2 148 30.4
AUR62019253 Chenopodium quinoa HOM05D000843 ORTHO05D000698 1.2e-06 58.2 76 39.5
AUR62043679 Chenopodium quinoa HOM05D000843 ORTHO05D000698 1.2e-06 58.2 76 39.5
Thhalv10018327m.g Eutrema salsugineum HOM05D000843 ORTHO05D000698 1.2e-06 58.2 150 30.0
AUR62000081 Chenopodium quinoa HOM05D000843 ORTHO05D000698 1.6e-06 57.8 126 32.5
Os09g0490200 Oryza sativa ssp. japonica HOM05D000843 ORTHO05D000698 1.6e-06 57.8 161 31.1
AT1G73730 Arabidopsis thaliana HOM05D000843 ORTHO05D000698 2.0e-06 57.4 138 31.9
BcaB03g15079 Brassica carinata HOM05D000843 ORTHO05D000698 2.0e-06 57.4 153 30.1
CSS0020072 Camellia sinensis var. sinensis HOM05D000843 ORTHO05D000698 2.0e-06 57.4 97 35.1
Nitab4.5_0009808g0030 Nicotiana tabacum HOM05D000843 ORTHO05D000698 2.0e-06 57.4 128 34.4
PSO339G1804 Papaver somniferum HOM05D000843 ORTHO05D000698 2.0e-06 57.4 102 34.3
Aqoxy5G01826 Aquilegia oxysepala HOM05D000843 ORTHO05D000698 2.7e-06 57.0 112 33.0
HanXRQChr02g0056481 Helianthus annuus HOM05D000843 ORTHO05D000698 2.7e-06 57.0 131 28.2
VMungo1080G0975 Vigna mungo HOM05D000843 ORTHO05D000698 2.7e-06 57.0 72 43.1
MSTRG.17571 Avicennia marina HOM05D000843 ORTHO05D000698 3.5e-06 56.6 113 33.6
MELO3C015210.2 Cucumis melo HOM05D000843 ORTHO05D000698 3.5e-06 56.6 98 35.7
Gohir.D05G070400 Gossypium hirsutum HOM05D000843 ORTHO05D000698 3.5e-06 56.6 112 34.8
Medtr2g098470 Medicago truncatula HOM05D000843 ORTHO05D000698 3.5e-06 56.6 120 34.2
TPR.G18848 Trifolium pratense HOM05D000843 ORTHO05D000698 3.5e-06 56.6 112 33.9
Haze_23049 Corylus avellana HOM05D000843 ORTHO05D000698 4.6e-06 56.2 120 32.5
Duzib170G0288 Durio zibethinus HOM05D000843 ORTHO05D000698 4.6e-06 56.2 79 40.5
ECA233G5298 Erigeron canadensis HOM05D000843 ORTHO05D000698 4.6e-06 56.2 122 31.1
Gorai.009G071400 Gossypium raimondii HOM05D000843 ORTHO05D000698 4.6e-06 56.2 112 38.4
Gohir.A05G067500 Gossypium hirsutum HOM05D000843 ORTHO05D000698 5.9e-06 55.8 125 36.0
TAR163G0003 Trochodendron aralioides HOM05D000843 ORTHO05D000698 5.9e-06 55.8 109 33.0
ClCG00G002220 Citrullus lanatus HOM05D000843 ORTHO05D000698 7.8e-06 55.5 83 37.3
MD03G1020800 Malus domestica HOM05D000843 ORTHO05D000698 7.8e-06 55.5 146 33.6
Hund22078 Selenicereus undatus HOM05D000843 ORTHO05D000698 7.8e-06 55.5 105 35.2


User provided reference genes

Program Settings