Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1380 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 0.0e+00 1226.8 932 100.0
CDE04G1037 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 1.5e-21 109.4 148 91.9
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 5.4e-11 74.3 122 33.6
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 7.9e-10 70.5 80 40.0
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 3.9e-09 68.2 91 37.4
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 8.7e-09 67.0 125 34.4
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 1.1e-08 66.6 72 38.9
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 3.3e-08 65.1 86 37.2
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 4.3e-08 64.7 83 34.9
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 5.6e-08 64.3 82 35.4
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 5.6e-08 64.3 93 39.8
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 1.6e-07 62.8 92 35.9
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 2.1e-07 62.4 103 31.1
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 2.8e-07 62.0 76 35.5
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 3.6e-07 61.6 123 33.3
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 6.2e-07 60.8 98 29.6
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 8.1e-07 60.5 104 34.6
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.1e-06 60.1 98 29.6
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 1.4e-06 59.7 108 31.5
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 1.4e-06 59.7 84 38.1
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.4e-06 59.7 98 29.6
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 1.8e-06 59.3 150 31.3
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 1.8e-06 59.3 77 39.0
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 1.8e-06 59.3 80 36.2
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 2.4e-06 58.9 81 34.6
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 2.4e-06 58.9 81 39.5
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 3.1e-06 58.5 80 37.5
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 3.1e-06 58.5 151 32.5
MBI15_g36478_MAGBIO Magnolia biondii HOM05D007641 ORTHO05D007630 4.0e-06 58.2 414 27.5
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 4.0e-06 58.2 92 32.6
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 4.0e-06 58.2 92 34.8
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 5.3e-06 57.8 146 30.8
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 9.0e-06 57.0 83 31.3
Phvul.008G082800 Phaseolus vulgaris HOM05D007752 ORTHO05D009994 9.0e-06 57.0 80 33.8
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 9.0e-06 57.0 194 28.4


User provided reference genes

Program Settings