Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1369 Ceratophyllum demersum HOM05D006365 ORTHO05D007893 3.5e-80 301.6 156 100.0
Nn1g02631 Nelumbo nucifera HOM05D006365 ORTHO05D007893 1.1e-20 104.0 108 56.5
FAN20G2720 Fragaria x ananassa HOM05D006365 ORTHO05D007893 2.4e-20 102.8 114 54.4
GSVIVG01000761001 Vitis vinifera HOM05D006365 ORTHO05D007893 2.4e-20 102.8 107 55.1
FAN15G1626 Fragaria x ananassa HOM05D006365 ORTHO05D007893 3.1e-20 102.4 114 53.5
FAN27G2025 Fragaria x ananassa HOM05D006365 ORTHO05D007893 3.1e-20 102.4 114 53.5
FAN24G0578 Fragaria x ananassa HOM05D006365 ORTHO05D007893 4.1e-20 102.1 114 53.5
Actinidia33762 Actinidia chinensis HOM05D006365 ORTHO05D007893 5.3e-20 101.7 108 52.8
Rhsim13G0031800 Rhododendron simsii HOM05D006365 ORTHO05D007893 5.3e-20 101.7 105 55.2
RcHm_v2.0_Chr6g0289161 Rosa chinensis HOM05D006365 ORTHO05D007893 5.3e-20 101.7 114 51.8
Ciclev10019917m.g Citrus clementina HOM05D006365 ORTHO05D007893 9.1e-20 100.9 104 54.8
FvH4_2g22240 Fragaria vesca HOM05D006365 ORTHO05D007893 9.1e-20 100.9 114 52.6
Cfa002346 Carpinus fangiana HOM05D006365 ORTHO05D007893 1.2e-19 100.5 107 55.1
Haze_24555 Corylus avellana HOM05D006365 ORTHO05D007893 1.2e-19 100.5 107 55.1
Thecc.01G264700 Theobroma cacao HOM05D006365 ORTHO05D007893 1.2e-19 100.5 114 49.1
COL.COLO4_08271 Corchorus olitorius HOM05D006365 ORTHO05D007893 4.5e-19 98.6 105 52.4
CSS0000446 Camellia sinensis var. sinensis HOM05D006365 ORTHO05D007893 5.9e-19 98.2 105 55.2
CSS0009937 Camellia sinensis var. sinensis HOM05D006365 ORTHO05D007893 5.9e-19 98.2 105 55.2
QL04p081293 Quercus lobata HOM05D006365 ORTHO05D007893 5.9e-19 98.2 105 53.3
Gohir.A08G061000 Gossypium hirsutum HOM05D006365 ORTHO05D007893 1.3e-18 97.1 113 51.3
Gohir.D08G070250 Gossypium hirsutum HOM05D006365 ORTHO05D007893 1.3e-18 97.1 113 51.3
PSO832G0319 Papaver somniferum HOM05D006365 ORTHO05D007893 1.7e-18 96.7 115 51.3
SalBow4G1819 Salvia bowleyana HOM05D006365 ORTHO05D007893 1.7e-18 96.7 114 49.1
CiPaw.03G259200 Carya illinoinensis HOM05D006365 ORTHO05D007893 2.9e-18 95.9 106 52.8
Gohir.D11G134100 Gossypium hirsutum HOM05D006365 ORTHO05D007893 2.9e-18 95.9 114 50.0
Gorai.007G143300 Gossypium raimondii HOM05D006365 ORTHO05D007893 2.9e-18 95.9 114 50.0
Gohir.A11G128200 Gossypium hirsutum HOM05D006365 ORTHO05D007893 3.8e-18 95.5 114 50.0
Gorai.004G074000 Gossypium raimondii HOM05D006365 ORTHO05D007893 3.8e-18 95.5 113 50.4
Cpa.g.sc52.148 Carica papaya HOM05D006365 ORTHO05D007893 5.0e-18 95.1 117 47.9
TAR362G0809 Trochodendron aralioides HOM05D006365 ORTHO05D007893 5.0e-18 95.1 105 52.4
Migut.D00394 Erythranthe guttata HOM05D006365 ORTHO05D007893 6.5e-18 94.7 115 47.8
Os03g0164700 Oryza sativa ssp. japonica HOM05D006365 ORTHO05D007893 6.5e-18 94.7 116 48.3
PSO210G3674 Papaver somniferum HOM05D006365 ORTHO05D007893 6.5e-18 94.7 115 50.4
Sabra05G0169100 Salix brachista HOM05D006365 ORTHO05D007893 1.1e-17 94.0 105 51.4
Dinv22456 Davidia involucrata HOM05D006365 ORTHO05D007893 1.4e-17 93.6 111 53.2
Nn3g19548 Nelumbo nucifera HOM05D006365 ORTHO05D007893 1.4e-17 93.6 100 55.0
MSTRG.18301 Avicennia marina HOM05D006365 ORTHO05D007893 1.9e-17 93.2 105 53.3
Duzib211G0170 Durio zibethinus HOM05D006365 ORTHO05D007893 1.9e-17 93.2 113 52.2
PGR044G0103 Punica granatum HOM05D006365 ORTHO05D007893 1.9e-17 93.2 112 52.7
vmacro02635 Vaccinium macrocarpon HOM05D006365 ORTHO05D007893 1.9e-17 93.2 105 51.4
Aqoxy5G00306 Aquilegia oxysepala HOM05D006365 ORTHO05D007893 2.5e-17 92.8 113 50.4
SGA_v2.0_scaffold1G00596 Striga asiatica HOM05D006365 ORTHO05D007893 3.2e-17 92.4 114 50.0
TWI12G0027 Tripterygium wilfordii HOM05D006365 ORTHO05D007893 3.2e-17 92.4 105 52.4
Potri.002G042700 Populus trichocarpa HOM05D006365 ORTHO05D007893 4.2e-17 92.0 109 50.5
Sed0004051 Sechium edule HOM05D006365 ORTHO05D007893 4.2e-17 92.0 113 48.7
Manes.01G200300 Manihot esculenta HOM05D006365 ORTHO05D007893 5.5e-17 91.7 105 52.4
Lsat_1_v5_gn_9_9520 Lactuca sativa HOM05D006365 ORTHO05D007893 7.2e-17 91.3 105 54.3
MD10G1190800 Malus domestica HOM05D006365 ORTHO05D007893 9.4e-17 90.9 113 49.6
Hma1.2p1_1029F.1_g249750 Hydrangea macrophylla HOM05D006365 ORTHO05D007893 1.2e-16 90.5 111 47.7
Prupe.8G229800 Prunus persica HOM05D006365 ORTHO05D007893 1.6e-16 90.1 114 48.2
Potri.005G220400 Populus trichocarpa HOM05D006365 ORTHO05D007893 2.7e-16 89.4 107 49.5
Nitab4.5_0000187g0360 Nicotiana tabacum HOM05D006365 ORTHO05D007893 3.6e-16 89.0 105 52.4
Peaxi162Scf00719g00049 Petunia axillaris HOM05D006365 ORTHO05D007893 3.6e-16 89.0 106 52.8
MD05G1203500 Malus domestica HOM05D006365 ORTHO05D007893 4.7e-16 88.6 110 49.1
Nitab4.5_0004328g0020 Nicotiana tabacum HOM05D006365 ORTHO05D007893 6.1e-16 88.2 105 52.4
CsaV3_7G027480 Cucumis sativus L. HOM05D006365 ORTHO05D007893 1.4e-15 87.0 113 44.2
Lalb_Chr02g0142351 Lupinus albus HOM05D006365 ORTHO05D007893 1.4e-15 87.0 104 47.1
Cc01_g18670 Coffea canephora HOM05D006365 ORTHO05D007893 1.8e-15 86.7 112 46.4
Lj5g0002733 Lotus japonicus HOM05D006365 ORTHO05D007893 2.3e-15 86.3 103 47.6
TWI75G1360 Tripterygium wilfordii HOM05D006365 ORTHO05D007893 3.0e-15 85.9 104 49.0
Zm00001eb004990 Zea mays HOM05D006365 ORTHO05D007893 3.9e-15 85.5 104 49.0
Eucgr.K03306 Eucalyptus grandis HOM05D006365 ORTHO05D007893 5.2e-15 85.1 105 51.4
ClCG09G007650 Citrullus lanatus HOM05D006365 ORTHO05D007893 8.8e-15 84.3 113 43.4
ATR0665G646 Amborella trichopoda HOM05D006365 ORTHO05D007893 1.1e-14 84.0 112 42.9
CAN.G1501.1 Capsicum annuum HOM05D006365 ORTHO05D007893 1.1e-14 84.0 104 51.9
Lj2A1156T49 Lonicera japonica HOM05D006365 ORTHO05D007893 1.1e-14 84.0 121 45.5
TPR.G9050 Trifolium pratense HOM05D006365 ORTHO05D007893 1.1e-14 84.0 104 47.1
Sopen09g027890 Solanum pennellii HOM05D006365 ORTHO05D007893 1.5e-14 83.6 104 51.9
AL1G16740 Arabidopsis lyrata HOM05D006365 ORTHO05D007893 2.6e-14 82.8 109 46.8
Ca_09701_v3 Cicer arietinum L. HOM05D006365 ORTHO05D007893 3.3e-14 82.4 104 46.2
THA.LOC104826252 Tarenaya hassleriana HOM05D006365 ORTHO05D007893 3.3e-14 82.4 108 45.4
PGSC0003DMG400019907 Solanum tuberosum HOM05D006365 ORTHO05D007893 4.4e-14 82.0 104 51.0
arahy.Tifrunner.gnm1.ann1.47C7BL Arachis hypogaea HOM05D006365 ORTHO05D007893 7.4e-14 81.3 107 50.5
AT1G06730 Arabidopsis thaliana HOM05D006365 ORTHO05D007893 9.7e-14 80.9 107 46.7
arahy.Tifrunner.gnm1.ann1.8IP52C Arachis hypogaea HOM05D006365 ORTHO05D007893 9.7e-14 80.9 107 50.5
HanXRQChr10g0281321 Helianthus annuus HOM05D006365 ORTHO05D007893 9.7e-14 80.9 106 49.1
Medtr1g070375 Medicago truncatula HOM05D006365 ORTHO05D007893 1.3e-13 80.5 104 43.3
HPP92_006135 Vanilla planifolia HOM05D006365 ORTHO05D007893 1.3e-13 80.5 110 41.8
Aa31LG1G7780 Aethionema arabicum HOM05D006365 ORTHO05D007893 1.7e-13 80.1 106 48.1
AUR62011919 Chenopodium quinoa HOM05D006365 ORTHO05D007893 1.7e-13 80.1 104 48.1
MELO3C015749.2 Cucumis melo HOM05D006365 ORTHO05D007893 2.2e-13 79.7 95 47.4
Carub.0001s0606 Capsella rubella HOM05D006365 ORTHO05D007893 2.8e-13 79.3 110 45.5
BcaC05g24646 Brassica carinata HOM05D006365 ORTHO05D007893 3.7e-13 79.0 106 45.3
A10p05310 Brassica napus HOM05D006365 ORTHO05D007893 3.7e-13 79.0 106 45.3
BolC5t29263H Brassica oleracea HOM05D006365 ORTHO05D007893 3.7e-13 79.0 106 45.3
BraA10t42796Z Brassica rapa HOM05D006365 ORTHO05D007893 3.7e-13 79.0 106 45.3
CARHR006420 Cardamine hirsuta HOM05D006365 ORTHO05D007893 4.8e-13 78.6 109 48.6
Glyma.10G034000 Glycine max HOM05D006365 ORTHO05D007893 4.8e-13 78.6 104 47.1
THA.LOC104800808 Tarenaya hassleriana HOM05D006365 ORTHO05D007893 4.8e-13 78.6 107 44.9
Sp1g05460 Schrenkiella parvula HOM05D006365 ORTHO05D007893 6.3e-13 78.2 105 46.7
BcaB02g06753 Brassica carinata HOM05D006365 ORTHO05D007893 8.2e-13 77.8 109 44.0
C05p04910 Brassica napus HOM05D006365 ORTHO05D007893 8.2e-13 77.8 106 45.3
unitig_22.g5284 Utricularia gibba HOM05D006365 ORTHO05D007893 8.2e-13 77.8 105 45.7
CANSAT01G1790 Cannabis sativa HOM05D006365 ORTHO05D007893 1.1e-12 77.4 101 50.5
AUR62032234 Chenopodium quinoa HOM05D006365 ORTHO05D007893 1.1e-12 77.4 104 47.1
Hund09578 Selenicereus undatus HOM05D006365 ORTHO05D007893 1.4e-12 77.0 118 41.5
Dinv34587 Davidia involucrata HOM05D006365 ORTHO05D007893 2.4e-12 76.3 77 55.8
EL10Ac5g10447 Beta vulgaris HOM05D006365 ORTHO05D007893 3.1e-12 75.9 104 46.2
Phvul.007G178600 Phaseolus vulgaris HOM05D006365 ORTHO05D007893 4.1e-12 75.5 104 46.2
VMungo0720G1621 Vigna mungo HOM05D006365 ORTHO05D007893 4.1e-12 75.5 103 46.6
Thhalv10007491m.g Eutrema salsugineum HOM05D006365 ORTHO05D007893 5.3e-12 75.1 104 45.2
Glyma.13G120200 Glycine max HOM05D006365 ORTHO05D007893 7.0e-12 74.7 104 45.2
Psat6g056320 Pisum sativum HOM05D006365 ORTHO05D007893 2.6e-11 72.8 104 43.3
MBI11_g09868_MAGBIO Magnolia biondii HOM05D006365 ORTHO05D007893 3.5e-11 72.4 58 63.8
Lj1A60T61 Lonicera japonica HOM05D006365 ORTHO05D007893 5.0e-10 68.6 109 41.3
Atru.chr5.1605 Acer truncatum HOM05D006365 ORTHO05D007893 1.1e-09 67.4 104 43.3
DCAR_018456 Daucus carota HOM05D006365 ORTHO05D007893 1.9e-09 66.6 104 40.4
Sc17g0000830 Simmondsia chinensis HOM05D006365 ORTHO05D007893 2.5e-09 66.2 54 61.1
SHI09906 Sapria himalayana HOM05D006365 ORTHO05D007893 4.2e-09 65.5 94 43.6
SEGI_04676 Sequoiadendron giganteum HOM05D006365 ORTHO05D007893 8.8e-07 57.8 51 52.9
DCAR_007340 Daucus carota HOM05D006365 ORTHO05D007893 4.4e-06 55.5 105 37.1


User provided reference genes

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