Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 1.1e-119 433.3 219 100.0
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 1.8e-98 362.8 198 93.4
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 1.6e-86 323.2 198 83.3
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 2.1e-86 322.8 198 81.8
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 3.5e-86 322.0 198 81.3
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 1.3e-85 320.1 201 79.1
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 5.1e-85 318.2 200 80.5
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 1.9e-84 316.2 198 81.3
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 1.9e-84 316.2 203 80.3
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 4.3e-84 315.1 197 78.2
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 5.6e-84 314.7 191 81.7
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 7.3e-84 314.3 187 80.7
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 9.6e-84 313.9 199 80.4
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 9.6e-84 313.9 201 78.6
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 9.6e-84 313.9 200 78.0
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 1.6e-83 313.2 199 79.4
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 2.8e-83 312.4 205 77.6
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 3.6e-83 312.0 203 78.3
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 4.8e-83 311.6 198 78.3
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 4.8e-83 311.6 199 79.9
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 8.1e-83 310.8 199 79.9
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 1.1e-82 310.5 198 77.8
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 1.4e-82 310.1 198 77.3
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.4e-82 310.1 198 77.3
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.4e-82 310.1 198 77.3
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 1.8e-82 309.7 210 74.3
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 2.4e-82 309.3 199 78.9
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 2.4e-82 309.3 198 76.8
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 2.4e-82 309.3 198 76.8
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 3.1e-82 308.9 198 77.8
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 4.0e-82 308.5 198 76.3
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 4.0e-82 308.5 198 77.3
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 4.0e-82 308.5 201 77.6
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 5.3e-82 308.1 201 78.6
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 9.0e-82 307.4 200 75.0
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 9.0e-82 307.4 191 78.5
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 1.2e-81 307.0 198 79.3
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 1.2e-81 307.0 198 76.3
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 1.5e-81 306.6 199 77.9
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 1.5e-81 306.6 207 77.3
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 2.6e-81 305.8 196 79.1
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 2.6e-81 305.8 198 76.8
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 4.5e-81 305.1 198 77.3
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 4.5e-81 305.1 198 76.8
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 5.8e-81 304.7 206 74.3
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 7.6e-81 304.3 194 78.4
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 7.6e-81 304.3 199 77.4
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 9.9e-81 303.9 199 76.4
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 1.3e-80 303.5 202 76.2
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 1.3e-80 303.5 198 76.3
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 2.2e-80 302.8 195 75.4
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 2.2e-80 302.8 193 76.2
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 2.9e-80 302.4 198 76.3
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 3.8e-80 302.0 189 77.2
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 8.4e-80 300.8 192 79.2
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 8.4e-80 300.8 201 76.1
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 1.1e-79 300.4 190 77.9
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.1e-79 300.4 189 76.7
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.1e-79 300.4 189 76.7
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.9e-79 299.7 202 74.3
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 2.4e-79 299.3 195 73.3
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 2.4e-79 299.3 198 78.3
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 2.4e-79 299.3 187 77.5
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 3.2e-79 298.9 198 75.3
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 4.2e-79 298.5 198 75.8
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 5.4e-79 298.1 195 74.4
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 5.4e-79 298.1 198 75.8
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 7.1e-79 297.7 193 75.6
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 9.3e-79 297.4 195 73.3
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 9.3e-79 297.4 201 72.6
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 1.2e-78 297.0 195 72.8
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 1.2e-78 297.0 195 72.8
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 1.6e-78 296.6 192 74.5
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 2.1e-78 296.2 187 76.5
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 2.7e-78 295.8 198 73.7
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 2.7e-78 295.8 196 73.5
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 2.7e-78 295.8 196 73.0
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 3.5e-78 295.4 195 73.3
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 3.5e-78 295.4 195 71.3
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 3.5e-78 295.4 201 71.6
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 3.5e-78 295.4 198 74.7
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 1.0e-77 293.9 190 75.3
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 1.3e-77 293.5 193 76.7
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 1.7e-77 293.1 199 74.9
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 1.7e-77 293.1 201 73.6
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 2.3e-77 292.7 183 77.6
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 3.0e-77 292.4 193 76.7
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 5.1e-77 291.6 187 76.5
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 8.7e-77 290.8 197 71.1
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 8.7e-77 290.8 187 77.5
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 1.5e-76 290.0 184 75.5
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 1.5e-76 290.0 191 75.4
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 1.9e-76 289.7 213 72.8
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 1.9e-76 289.7 204 69.1
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 2.5e-76 289.3 168 82.7
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 4.3e-76 288.5 191 72.8
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 4.3e-76 288.5 200 72.5
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 5.6e-76 288.1 198 72.7
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 7.4e-76 287.7 189 74.6
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 9.6e-76 287.3 195 72.3
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 1.1e-74 283.9 189 73.0
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 1.4e-74 283.5 183 72.7
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 1.4e-74 283.5 191 74.3
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 6.9e-74 281.2 185 73.0
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 9.0e-74 280.8 200 70.0
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 3.4e-73 278.9 186 71.5
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 3.4e-73 278.9 188 70.7
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 1.7e-72 276.6 198 74.7
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 3.8e-72 275.4 189 71.4
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 6.4e-72 274.6 219 63.5
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 8.4e-72 274.2 187 69.5
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 1.9e-71 273.1 193 68.4
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 2.4e-71 272.7 197 70.6
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 1.6e-70 270.0 204 69.1
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 6.0e-70 268.1 189 68.3
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 1.1e-66 257.3 292 52.4
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 5.3e-66 255.0 195 65.1
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 6.9e-66 254.6 198 67.2
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 2.0e-65 253.1 195 65.6
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 3.8e-64 248.8 152 82.2
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 1.6e-62 243.4 154 76.0
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 3.0e-61 239.2 156 76.3
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 6.7e-61 238.0 153 73.2
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 8.7e-61 237.7 194 60.3
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 1.7e-56 223.4 150 68.7
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 1.2e-54 217.2 203 59.6
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 1.6e-51 206.8 158 64.6
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 1.4e-50 203.8 132 76.5
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 2.1e-46 189.9 173 55.5
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 1.8e-45 186.8 192 53.6
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 2.6e-33 146.4 105 68.6
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 5.5e-31 138.7 163 39.3
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 1.5e-28 130.6 97 71.1
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 4.1e-26 122.5 88 63.6
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 4.7e-22 109.0 198 32.3


User provided reference genes

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