Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1347 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 6.3e-78 293.9 135 100.0
CDE04G0885 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 3.4e-39 165.2 123 59.3
Zm00001eb052110 Zea mays HOM05D007587 ORTHO05D009657 1.6e-25 119.8 163 39.3
CSS0045179 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 7.4e-18 94.4 62 62.9
vmacro04607 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 1.3e-17 93.6 70 57.1
vmacro04609 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 8.1e-17 90.9 70 57.1
PGSC0003DMG400004952 Solanum tuberosum HOM05D007587 ORTHO05D009657 2.4e-16 89.4 61 59.0
vmacro04608 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 2.4e-16 89.4 69 56.5
Nn5g27360 Nelumbo nucifera HOM05D007587 ORTHO05D009657 6.9e-16 87.8 57 64.9
TAR381G0827 Trochodendron aralioides HOM05D007587 ORTHO05D009657 1.2e-15 87.0 57 59.6
QL02p001961 Quercus lobata HOM05D007587 ORTHO05D009657 1.5e-15 86.7 44 75.0
CAN.G416.39 Capsicum annuum HOM05D007587 ORTHO05D009657 2.6e-15 85.9 71 53.5
Atru.chr13.897 Acer truncatum HOM05D007587 ORTHO05D009657 7.6e-15 84.3 49 65.3
CiPaw.15G043500 Carya illinoinensis HOM05D007587 ORTHO05D009657 7.6e-15 84.3 62 61.3
Nitab4.5_0015343g0010 Nicotiana tabacum HOM05D007587 ORTHO05D009657 7.6e-15 84.3 60 61.7
Potri.005G150300 Populus trichocarpa HOM05D007587 ORTHO05D009657 7.6e-15 84.3 46 67.4
Hma1.2p1_2651F.1_g326150 Hydrangea macrophylla HOM05D007587 ORTHO05D009657 1.3e-14 83.6 46 67.4
Manes.18G051550 Manihot esculenta HOM05D007587 ORTHO05D009657 1.3e-14 83.6 57 56.1
CiPaw.15G043600 Carya illinoinensis HOM05D007587 ORTHO05D009657 1.7e-14 83.2 63 58.7
GSVIVG01034787001 Vitis vinifera HOM05D007587 ORTHO05D009657 1.7e-14 83.2 63 54.0
Rhsim07G0216200 Rhododendron simsii HOM05D007587 ORTHO05D009657 2.2e-14 82.8 51 64.7
Thecc.08G082100 Theobroma cacao HOM05D007587 ORTHO05D009657 2.2e-14 82.8 62 59.7
Nn5g27361 Nelumbo nucifera HOM05D007587 ORTHO05D009657 2.9e-14 82.4 44 70.5
Rhsim07G0216100 Rhododendron simsii HOM05D007587 ORTHO05D009657 2.9e-14 82.4 55 60.0
AagrBONN_evm.TU.Sc2ySwM_117.169 Anthoceros agrestis HOM05D007587 ORTHO05D009657 4.9e-14 81.6 44 68.2
Actinidia29637 Actinidia chinensis HOM05D007587 ORTHO05D009657 6.4e-14 81.3 56 57.1
Cfa017911 Carpinus fangiana HOM05D007587 ORTHO05D009657 6.4e-14 81.3 44 65.9
MBI16_g05021_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 6.4e-14 81.3 63 55.6
Nn4g24320 Nelumbo nucifera HOM05D007587 ORTHO05D009657 6.4e-14 81.3 64 54.7
SalBow7G1850 Salvia bowleyana HOM05D007587 ORTHO05D009657 6.4e-14 81.3 64 54.7
COL.COLO4_35374 Corchorus olitorius HOM05D007587 ORTHO05D009657 1.1e-13 80.5 66 53.0
Atru.chr3.473 Acer truncatum HOM05D007587 ORTHO05D009657 1.9e-13 79.7 57 54.4
Cc10_g07830 Coffea canephora HOM05D007587 ORTHO05D009657 1.9e-13 79.7 61 54.1
Nn5g27362 Nelumbo nucifera HOM05D007587 ORTHO05D009657 2.4e-13 79.3 47 63.8
Gohir.A01G124700 Gossypium hirsutum HOM05D007587 ORTHO05D009657 4.2e-13 78.6 43 67.4
Gohir.D01G112300 Gossypium hirsutum HOM05D007587 ORTHO05D009657 4.2e-13 78.6 43 67.4
Gorai.002G137200 Gossypium raimondii HOM05D007587 ORTHO05D009657 4.2e-13 78.6 43 67.4
QL06p044263 Quercus lobata HOM05D007587 ORTHO05D009657 4.2e-13 78.6 72 44.4
Zm00001eb135300 Zea mays HOM05D007587 ORTHO05D009657 4.2e-13 78.6 61 52.5
Manes.13G132300 Manihot esculenta HOM05D007587 ORTHO05D009657 9.3e-13 77.4 48 56.2
MBI16_g05020_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 1.2e-12 77.0 39 76.9
Migut.O00867 Erythranthe guttata HOM05D007587 ORTHO05D009657 2.1e-12 76.3 43 67.4
Os03g0673700 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 2.1e-12 76.3 62 48.4
Phvul.003G249500 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 2.1e-12 76.3 43 67.4
Migut.C00432 Erythranthe guttata HOM05D007587 ORTHO05D009657 4.6e-12 75.1 43 65.1
COL.COLO4_22178 Corchorus olitorius HOM05D007587 ORTHO05D009657 6.0e-12 74.7 43 60.5
Lj7C15T6 Lonicera japonica HOM05D007587 ORTHO05D009657 6.0e-12 74.7 64 43.8
Os12g0596101 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 6.0e-12 74.7 56 50.0
Thecc.01G045600 Theobroma cacao HOM05D007587 ORTHO05D009657 1.0e-11 73.9 43 60.5
Nitab4.5_0005594g0030 Nicotiana tabacum HOM05D007587 ORTHO05D009657 1.3e-11 73.6 43 58.1
Mapoly0026s0006 Marchantia polymorpha HOM05D007587 ORTHO05D009657 2.3e-11 72.8 71 39.4
Psat2g163680 Pisum sativum HOM05D007587 ORTHO05D009657 2.3e-11 72.8 68 45.6
Glyma.16G143900 Glycine max HOM05D007587 ORTHO05D009657 3.0e-11 72.4 43 58.1
Prupe.7G145500 Prunus persica HOM05D007587 ORTHO05D009657 3.0e-11 72.4 43 58.1
Solyc02g090080.1 Solanum lycopersicum HOM05D007587 ORTHO05D009657 3.0e-11 72.4 43 60.5
CSS0038445 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 3.9e-11 72.0 43 58.1
ECA238G1538 Erigeron canadensis HOM05D003002 ORTHO05D002276 3.9e-11 72.0 43 58.1
Migut.H00502 Erythranthe guttata HOM05D007587 ORTHO05D009657 3.9e-11 72.0 43 55.8
Psat0s261g0120 Pisum sativum HOM05D007587 ORTHO05D009657 3.9e-11 72.0 69 40.6
TPR.G29850 Trifolium pratense HOM05D007587 ORTHO05D009657 5.1e-11 71.6 43 58.1
FAN26G0670 Fragaria x ananassa HOM05D007587 ORTHO05D009657 6.7e-11 71.2 58 50.0
Dinv39924 Davidia involucrata HOM05D007587 ORTHO05D009657 8.7e-11 70.9 43 55.8
FAN23G2556 Fragaria x ananassa HOM05D007587 ORTHO05D009657 8.7e-11 70.9 50 50.0
FAN28G1310 Fragaria x ananassa HOM05D007587 ORTHO05D009657 8.7e-11 70.9 59 49.2
Medtr5g018610 Medicago truncatula HOM05D007587 ORTHO05D009657 8.7e-11 70.9 43 53.5
Pp3c20_19960 Physcomitrium patens HOM05D007587 ORTHO05D009657 8.7e-11 70.9 46 58.7
Cpa.g.sc15.59 Carica papaya HOM05D007587 ORTHO05D009657 1.1e-10 70.5 43 55.8
Cc07_g05380 Coffea canephora HOM05D007587 ORTHO05D009657 1.1e-10 70.5 49 51.0
Lsat_1_v5_gn_2_87241 Lactuca sativa HOM05D007587 ORTHO05D009657 1.1e-10 70.5 43 58.1
Potri.005G130750 Populus trichocarpa HOM05D007587 ORTHO05D009657 1.1e-10 70.5 64 46.9
Ciclev10027038m.g Citrus clementina HOM05D007587 ORTHO05D009657 1.9e-10 69.7 67 41.8
Glyma.02G061500 Glycine max HOM05D007587 ORTHO05D009657 2.5e-10 69.3 43 55.8
Os03g0673400 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 2.5e-10 69.3 43 60.5
TAR381G1104 Trochodendron aralioides HOM05D007587 ORTHO05D009657 2.5e-10 69.3 43 53.5
arahy.Tifrunner.gnm1.ann1.986LRW Arachis hypogaea HOM05D007587 ORTHO05D009657 3.3e-10 68.9 43 60.5
arahy.Tifrunner.gnm1.ann1.JQT6QK Arachis hypogaea HOM05D007587 ORTHO05D009657 3.3e-10 68.9 43 60.5
Glyma.11G061100 Glycine max HOM05D007587 ORTHO05D009657 4.3e-10 68.6 49 51.0
Gohir.A11G188150 Gossypium hirsutum HOM05D007587 ORTHO05D009657 4.3e-10 68.6 43 53.5
Gohir.D11G194650 Gossypium hirsutum HOM05D007587 ORTHO05D009657 4.3e-10 68.6 43 53.5
Gorai.007G208100 Gossypium raimondii HOM05D007587 ORTHO05D009657 4.3e-10 68.6 43 53.5
CBR_g28808 Chara braunii HOM05D007587 ORTHO05D009657 5.6e-10 68.2 42 57.1
Manes.12G097400 Manihot esculenta HOM05D007587 ORTHO05D009657 7.4e-10 67.8 48 52.1
SalBow1G8004 Salvia bowleyana HOM05D007587 ORTHO05D009657 7.4e-10 67.8 64 37.5
Lj2g0021293 Lotus japonicus HOM05D007587 ORTHO05D009657 9.6e-10 67.4 53 45.3
Glyma.19G074100 Glycine max HOM05D007587 ORTHO05D009657 1.3e-09 67.0 45 51.1
Lsat_1_v5_gn_3_93981 Lactuca sativa HOM05D007587 ORTHO05D009657 1.3e-09 67.0 43 53.5
Pp3c24_89 Physcomitrium patens HOM05D007587 ORTHO05D009657 1.6e-09 66.6 46 54.3
Potri.007G034000 Populus trichocarpa HOM05D007587 ORTHO05D009657 1.6e-09 66.6 66 42.4
ClCG02G013040 Citrullus lanatus HOM05D007587 ORTHO05D009657 2.8e-09 65.9 62 41.9
Phvul.002G023800 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 4.8e-09 65.1 58 44.8
Sed0017528 Sechium edule HOM05D007587 ORTHO05D009657 1.1e-08 63.9 50 48.0
Pp3c19_1061 Physcomitrium patens HOM05D007587 ORTHO05D009657 1.8e-08 63.2 45 55.6
Pp3c19_1062 Physcomitrium patens HOM05D007587 ORTHO05D009657 4.0e-08 62.0 44 56.8
Nn5g28989 Nelumbo nucifera HOM05D007587 ORTHO05D009657 6.9e-08 61.2 32 75.0
CsaV3_2G017120 Cucumis sativus L. HOM05D007587 ORTHO05D009657 2.0e-07 59.7 64 39.1


User provided reference genes

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