Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1328 Ceratophyllum demersum HOM05D005910 ORTHO05D007088 8.4e-55 216.9 116 100.0
DCAR_019862 Daucus carota HOM05D005910 ORTHO05D007088 1.4e-25 119.8 79 81.0
vmacro22120 Vaccinium macrocarpon HOM05D005910 ORTHO05D007088 7.0e-25 117.5 72 84.7
COL.COLO4_29362 Corchorus olitorius HOM05D005910 ORTHO05D007088 9.1e-25 117.1 89 73.0
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla HOM05D005910 ORTHO05D007088 1.2e-24 116.7 77 80.5
Lj1P1133T16 Lonicera japonica HOM05D005910 ORTHO05D007088 1.2e-24 116.7 79 77.2
Thecc.05G175100 Theobroma cacao HOM05D005910 ORTHO05D007088 1.2e-24 116.7 89 73.0
Dinv16345 Davidia involucrata HOM05D005910 ORTHO05D007088 2.6e-24 115.5 79 75.9
CSS0007798 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 5.9e-24 114.4 84 75.0
Sabra16G0063200 Salix brachista HOM05D005910 ORTHO05D007088 5.9e-24 114.4 83 74.7
Duzib106G1486 Durio zibethinus HOM05D005910 ORTHO05D007088 7.7e-24 114.0 89 71.9
Gohir.A09G128900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 7.7e-24 114.0 96 69.8
Gohir.D09G124900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 7.7e-24 114.0 96 69.8
Gorai.006G143800 Gossypium raimondii HOM05D005910 ORTHO05D007088 7.7e-24 114.0 96 69.8
Rhsim04G0093900 Rhododendron simsii HOM05D005910 ORTHO05D007088 7.7e-24 114.0 72 81.9
Rhsim04G0095300 Rhododendron simsii HOM05D005910 ORTHO05D007088 7.7e-24 114.0 72 81.9
TWI77G0716 Tripterygium wilfordii HOM05D005910 ORTHO05D007088 1.0e-23 113.6 82 74.4
PSO478G2464 Papaver somniferum HOM05D005910 ORTHO05D007088 1.3e-23 113.2 82 72.0
Lalb_Chr14g0364291 Lupinus albus HOM05D005910 ORTHO05D007088 1.7e-23 112.8 82 74.4
Actinidia38597 Actinidia chinensis HOM05D005910 ORTHO05D007088 2.2e-23 112.5 79 72.2
Oeu057587.1 Olea europaea HOM05D005910 ORTHO05D007088 2.2e-23 112.5 84 73.8
Actinidia17287 Actinidia chinensis HOM05D005910 ORTHO05D007088 2.9e-23 112.1 82 72.0
CANSAT64G0849 Cannabis sativa HOM05D005910 ORTHO05D007088 2.9e-23 112.1 79 75.9
Ca_08246_v3 Cicer arietinum L. HOM05D005910 ORTHO05D007088 2.9e-23 112.1 82 74.4
ClCG10G017690 Citrullus lanatus HOM05D005910 ORTHO05D007088 2.9e-23 112.1 82 74.4
Medtr7g085050 Medicago truncatula HOM05D005910 ORTHO05D007088 2.9e-23 112.1 82 74.4
Psat3g091080 Pisum sativum HOM05D005910 ORTHO05D007088 2.9e-23 112.1 82 74.4
TPR.G5912 Trifolium pratense HOM05D005910 ORTHO05D007088 2.9e-23 112.1 82 74.4
Carub.0006s0554 Capsella rubella HOM05D005910 ORTHO05D007088 3.8e-23 111.7 79 74.7
MELO3C009607.2 Cucumis melo HOM05D005910 ORTHO05D007088 3.8e-23 111.7 82 73.2
CsaV3_3G038630 Cucumis sativus L. HOM05D005910 ORTHO05D007088 3.8e-23 111.7 82 73.2
Glyma.16G043900 Glycine max HOM05D005910 ORTHO05D007088 3.8e-23 111.7 82 73.2
Glyma.19G108300 Glycine max HOM05D005910 ORTHO05D007088 3.8e-23 111.7 82 73.2
Phvul.001G097100 Phaseolus vulgaris HOM05D005910 ORTHO05D007088 3.8e-23 111.7 82 73.2
Solyc10g079000.1 Solanum lycopersicum HOM05D005910 ORTHO05D007088 3.8e-23 111.7 76 76.3
Sopen10g029620 Solanum pennellii HOM05D005910 ORTHO05D007088 3.8e-23 111.7 76 76.3
PGSC0003DMG400011451 Solanum tuberosum HOM05D005910 ORTHO05D007088 3.8e-23 111.7 76 76.3
VMungo1383G3424 Vigna mungo HOM05D005910 ORTHO05D007088 3.8e-23 111.7 82 73.2
CAN.G960.19 Capsicum annuum HOM05D005910 ORTHO05D007088 5.0e-23 111.3 76 76.3
Cc06_g15530 Coffea canephora HOM05D005910 ORTHO05D007088 5.0e-23 111.3 82 73.2
Migut.J01866 Erythranthe guttata HOM05D005910 ORTHO05D007088 5.0e-23 111.3 79 72.2
Lsat_1_v5_gn_2_56160 Lactuca sativa HOM05D005910 ORTHO05D007088 5.0e-23 111.3 72 79.2
AT5G06660 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 8.5e-23 110.5 78 74.4
Cpa.g.sc85.46 Carica papaya HOM05D005910 ORTHO05D007088 8.5e-23 110.5 78 74.4
ECA238G3575 Erigeron canadensis HOM05D005910 ORTHO05D007088 8.5e-23 110.5 74 78.4
Atru.chr8.1156 Acer truncatum HOM05D005910 ORTHO05D007088 1.1e-22 110.2 75 77.3
AL3G23640 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 1.1e-22 110.2 78 75.6
AT3G12030 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 1.1e-22 110.2 78 75.6
MSTRG.19925 Avicennia marina HOM05D005910 ORTHO05D007088 1.1e-22 110.2 78 71.8
Carub.0003s1137 Capsella rubella HOM05D005910 ORTHO05D007088 1.1e-22 110.2 78 75.6
CARHR206550 Cardamine hirsuta HOM05D005910 ORTHO05D007088 1.1e-22 110.2 78 75.6
Lalb_Chr22g0359441 Lupinus albus HOM05D005910 ORTHO05D007088 1.1e-22 110.2 82 73.2
CARHR086590 Cardamine hirsuta HOM05D005910 ORTHO05D007088 1.5e-22 109.8 78 75.6
Thhalv10016091m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 1.5e-22 109.8 78 74.4
Lj1g0011929 Lotus japonicus HOM05D005910 ORTHO05D007088 1.5e-22 109.8 82 73.2
AL6G16750 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 1.9e-22 109.4 78 74.4
Manes.09G037701 Manihot esculenta HOM05D005910 ORTHO05D007088 1.9e-22 109.4 82 70.7
PGR142G2565 Punica granatum HOM05D005910 ORTHO05D007088 1.9e-22 109.4 84 73.8
Aa31LG3G5420 Aethionema arabicum HOM05D005910 ORTHO05D007088 2.5e-22 109.0 78 74.4
BcaC09g48209 Brassica carinata HOM05D005910 ORTHO05D007088 2.5e-22 109.0 78 74.4
Thhalv10022159m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 2.5e-22 109.0 78 74.4
Sp6g36210 Schrenkiella parvula HOM05D005910 ORTHO05D007088 2.5e-22 109.0 78 74.4
CiPaw.09G028200 Carya illinoinensis HOM05D005910 ORTHO05D007088 3.2e-22 108.6 82 70.7
Ciclev10013918m.g Citrus clementina HOM05D005910 ORTHO05D007088 3.2e-22 108.6 75 77.3
QL07p024560 Quercus lobata HOM05D005910 ORTHO05D007088 3.2e-22 108.6 80 73.8
BolC1t05270H Brassica oleracea HOM05D005910 ORTHO05D007088 4.2e-22 108.2 78 73.1
BraA01t04144Z Brassica rapa HOM05D005910 ORTHO05D007088 4.2e-22 108.2 78 73.1
CiPaw.10G025100 Carya illinoinensis HOM05D005910 ORTHO05D007088 4.2e-22 108.2 82 70.7
FvH4_6g21840 Fragaria vesca HOM05D005910 ORTHO05D007088 4.2e-22 108.2 72 80.6
Mapoly0107s0023 Marchantia polymorpha HOM05D005910 ORTHO05D007088 4.2e-22 108.2 84 69.0
Sed0016712 Sechium edule HOM05D005910 ORTHO05D007088 4.2e-22 108.2 83 72.3
TAR623G1561 Trochodendron aralioides HOM05D005910 ORTHO05D007088 4.2e-22 108.2 69 81.2
unitig_26.g10040 Utricularia gibba HOM05D005910 ORTHO05D007088 4.2e-22 108.2 76 71.1
Aqoxy7G00427 Aquilegia oxysepala HOM05D005910 ORTHO05D007088 5.5e-22 107.8 82 70.7
BcaB04g21099 Brassica carinata HOM05D005910 ORTHO05D007088 5.5e-22 107.8 78 73.1
GSVIVG01033465001 Vitis vinifera HOM05D005910 ORTHO05D007088 5.5e-22 107.8 83 72.3
RcHm_v2.0_Chr3g0479191 Rosa chinensis HOM05D005910 ORTHO05D007088 7.2e-22 107.5 82 73.2
SGA_v2.0_scaffold69G23042 Striga asiatica HOM05D005910 ORTHO05D007088 7.2e-22 107.5 88 65.9
FAN02G0902 Fragaria x ananassa HOM05D005910 ORTHO05D007088 9.4e-22 107.1 72 79.2
FAN05G0623 Fragaria x ananassa HOM05D005910 ORTHO05D007088 9.4e-22 107.1 72 79.2
FAN14G5103 Fragaria x ananassa HOM05D005910 ORTHO05D007088 9.4e-22 107.1 72 79.2
Prupe.7G082200 Prunus persica HOM05D005910 ORTHO05D007088 9.4e-22 107.1 72 79.2
MD12G1054500 Malus domestica HOM05D005910 ORTHO05D007088 1.6e-21 106.3 84 71.4
Pp3c21_11350 Physcomitrium patens HOM05D005910 ORTHO05D007088 1.6e-21 106.3 84 70.2
THA.LOC104799285 Tarenaya hassleriana HOM05D005910 ORTHO05D007088 1.6e-21 106.3 78 73.1
CBR_g49549 Chara braunii HOM05D005910 ORTHO05D007088 2.1e-21 105.9 82 64.6
AUR62015329 Chenopodium quinoa HOM05D005910 ORTHO05D007088 2.1e-21 105.9 79 72.2
Sp3g10260 Schrenkiella parvula HOM05D005910 ORTHO05D007088 2.1e-21 105.9 78 73.1
Peaxi162Scf00463g00044 Petunia axillaris HOM05D005910 ORTHO05D007088 2.7e-21 105.5 72 73.6
ATR0598G129 Amborella trichopoda HOM05D005910 ORTHO05D007088 3.6e-21 105.1 91 65.9
Lsat_1_v5_gn_6_36581 Lactuca sativa HOM05D005910 ORTHO05D007088 3.6e-21 105.1 82 68.3
Sc13g0002410 Simmondsia chinensis HOM05D005910 ORTHO05D007088 3.6e-21 105.1 79 67.1
AUR62012008 Chenopodium quinoa HOM05D005910 ORTHO05D007088 6.1e-21 104.4 79 70.9
TAR369G0766 Trochodendron aralioides HOM05D005910 ORTHO05D007088 6.1e-21 104.4 69 76.8
SEGI_08450 Sequoiadendron giganteum HOM05D005910 ORTHO05D007088 8.0e-21 104.0 79 70.9
EL10Ac3g06882 Beta vulgaris HOM05D005910 ORTHO05D007088 1.8e-20 102.8 74 70.3
Nitab4.5_0009361g0020 Nicotiana tabacum HOM05D005910 ORTHO05D007088 1.8e-20 102.8 75 68.0
SMO367G0437 Selaginella moellendorffii HOM05D005910 ORTHO05D007088 1.8e-20 102.8 86 64.0
Nitab4.5_0000009g0230 Nicotiana tabacum HOM05D005910 ORTHO05D007088 2.3e-20 102.4 74 68.9
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis HOM05D005910 ORTHO05D007088 3.0e-20 102.1 71 74.6
Potri.016G060300 Populus trichocarpa HOM05D005910 ORTHO05D007088 5.2e-20 101.3 65 81.5
MD11G1118600 Malus domestica HOM05D005910 ORTHO05D007088 2.0e-19 99.4 136 49.3
Manes.08G042400 Manihot esculenta HOM05D005910 ORTHO05D007088 2.0e-19 99.4 66 77.3
Zm00001eb215980 Zea mays HOM05D005910 ORTHO05D007088 2.0e-19 99.4 82 64.6
Zm00001eb055560 Zea mays HOM05D005910 ORTHO05D007088 2.6e-19 99.0 82 64.6
MD14G1053500 Malus domestica HOM05D005910 ORTHO05D007088 3.4e-19 98.6 84 66.7
SHI31753 Sapria himalayana HOM05D005910 ORTHO05D007088 3.4e-19 98.6 94 60.6
HPP92_021275 Vanilla planifolia HOM05D005910 ORTHO05D007088 7.5e-19 97.4 73 68.5
Os03g0721400 Oryza sativa ssp. japonica HOM05D005910 ORTHO05D007088 1.3e-18 96.7 82 62.2
HanXRQChr14g0438251 Helianthus annuus HOM05D005910 ORTHO05D007088 1.7e-18 96.3 63 76.2
QL07p006238 Quercus lobata HOM05D005910 ORTHO05D007088 1.7e-18 96.3 80 65.0
CSS0042896 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 2.2e-18 95.9 84 64.3
MD00G1019800 Malus domestica HOM05D005910 ORTHO05D007088 6.3e-18 94.4 74 67.6
QL03p020127 Quercus lobata HOM05D005910 ORTHO05D007088 1.4e-17 93.2 80 62.5
Haze_20022 Corylus avellana HOM05D005910 ORTHO05D007088 5.3e-17 91.3 62 75.8
Haze_20025 Corylus avellana HOM05D005910 ORTHO05D007088 5.3e-17 91.3 62 75.8
Glyma.07G000600 Glycine max HOM05D005910 ORTHO05D007088 1.2e-16 90.1 70 70.0
MD03G1239200 Malus domestica HOM05D005910 ORTHO05D007088 4.5e-16 88.2 72 63.9
Actinidia38594 Actinidia chinensis HOM05D005910 ORTHO05D007088 1.1e-14 83.6 64 70.3
HanXRQChr03g0075461 Helianthus annuus HOM05D005910 ORTHO05D007088 1.5e-14 83.2 75 60.0
Sed0026900 Sechium edule HOM05D005910 ORTHO05D007088 1.5e-14 83.2 87 57.5
Cfa020141 Carpinus fangiana HOM05D005910 ORTHO05D007088 1.9e-14 82.8 57 73.7
Dinv24042 Davidia involucrata HOM05D005910 ORTHO05D007088 1.9e-14 82.8 63 71.4
AUR62043130 Chenopodium quinoa HOM05D005910 ORTHO05D007088 3.2e-14 82.0 74 63.5
CSS0024230 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.4e-12 76.6 75 56.0
DCAR_009688 Daucus carota HOM05D005910 ORTHO05D007088 2.3e-12 75.9 47 76.6
CSS0031188 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 4.5e-08 61.6 88 46.6
Haze_26182 Corylus avellana HOM05D005910 ORTHO05D007088 2.3e-07 59.3 78 44.9


User provided reference genes

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