Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1293 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 5.1e-196 687.6 348 100.0
CDE03G0408 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 9.7e-139 497.3 348 74.1
TAR625G0585 Trochodendron aralioides HOM05D005912 ORTHO05D007329 1.8e-113 413.3 359 57.7
Nn6g31870 Nelumbo nucifera HOM05D005912 ORTHO05D007329 2.7e-112 409.5 328 60.1
TAR288G0001 Trochodendron aralioides HOM05D005912 ORTHO05D007329 4.3e-110 402.1 337 59.1
Aqoxy6G01899 Aquilegia oxysepala HOM05D005912 ORTHO05D007329 1.6e-109 400.2 348 56.0
MBI08_g40329_MAGBIO Magnolia biondii HOM05D005912 ORTHO05D007329 4.0e-108 395.6 335 57.0
CiPaw.08G179600 Carya illinoinensis HOM05D005912 ORTHO05D007329 2.2e-106 389.8 366 54.4
Dinv40154 Davidia involucrata HOM05D005912 ORTHO05D007329 4.1e-105 385.6 365 53.7
vmacro20502 Vaccinium macrocarpon HOM05D005912 ORTHO05D007329 4.6e-104 382.1 328 56.7
Sabra05G0087400 Salix brachista HOM05D005912 ORTHO05D007329 5.9e-104 381.7 315 58.4
ATR0661G434 Amborella trichopoda HOM05D005912 ORTHO05D007329 1.5e-102 377.1 345 54.5
Potri.005G106500 Populus trichocarpa HOM05D005912 ORTHO05D007329 7.3e-102 374.8 316 57.9
Haze_03689 Corylus avellana HOM05D005912 ORTHO05D007329 9.5e-102 374.4 292 59.6
Atru.chr3.926 Acer truncatum HOM05D005912 ORTHO05D007329 2.8e-101 372.9 288 62.2
Cfa007040 Carpinus fangiana HOM05D005912 ORTHO05D007329 6.2e-101 371.7 331 55.6
PSO541G6093 Papaver somniferum HOM05D005912 ORTHO05D007329 1.4e-100 370.5 368 51.6
Rhsim10G0204000 Rhododendron simsii HOM05D005912 ORTHO05D007329 6.8e-100 368.2 293 59.4
QL06p052316 Quercus lobata HOM05D005912 ORTHO05D007329 1.2e-99 367.5 286 61.5
TWI73G1263 Tripterygium wilfordii HOM05D005912 ORTHO05D007329 4.4e-99 365.5 327 54.1
Thecc.01G010100 Theobroma cacao HOM05D005912 ORTHO05D007329 5.8e-99 365.2 300 57.3
BolC1t00315H Brassica oleracea HOM05D005912 ORTHO05D007329 4.9e-98 362.1 321 53.3
Lj4A227T48 Lonicera japonica HOM05D005912 ORTHO05D007329 6.4e-98 361.7 336 54.5
Manes.01G152000 Manihot esculenta HOM05D005912 ORTHO05D007329 6.4e-98 361.7 347 54.5
A01p02950 Brassica napus HOM05D005912 ORTHO05D007329 1.4e-97 360.5 317 55.2
BraA01t00278Z Brassica rapa HOM05D005912 ORTHO05D007329 1.4e-97 360.5 317 55.2
ClCG01G020670 Citrullus lanatus HOM05D005912 ORTHO05D007329 2.4e-97 359.8 289 58.5
Gorai.003G004900 Gossypium raimondii HOM05D005912 ORTHO05D007329 2.4e-97 359.8 300 58.3
C01p03300 Brassica napus HOM05D005912 ORTHO05D007329 3.2e-97 359.4 317 55.2
Gohir.D03G004600 Gossypium hirsutum HOM05D005912 ORTHO05D007329 3.2e-97 359.4 300 58.3
Duzib147G0472 Durio zibethinus HOM05D005912 ORTHO05D007329 4.1e-97 359.0 287 59.6
THA.LOC104807519 Tarenaya hassleriana HOM05D005912 ORTHO05D007329 4.1e-97 359.0 292 57.2
Gohir.A02G175200 Gossypium hirsutum HOM05D005912 ORTHO05D007329 5.4e-97 358.6 369 51.5
Zm00001eb002560 Zea mays HOM05D005912 ORTHO05D007329 7.0e-97 358.2 308 58.1
Actinidia17396 Actinidia chinensis HOM05D005912 ORTHO05D007329 9.2e-97 357.8 321 54.5
FvH4_1g10920 Fragaria vesca HOM05D005912 ORTHO05D007329 1.2e-96 357.5 366 52.7
PGR102G2191 Punica granatum HOM05D005912 ORTHO05D007329 1.2e-96 357.5 317 54.9
Prupe.7G176300 Prunus persica HOM05D005912 ORTHO05D007329 1.6e-96 357.1 312 56.7
Eucgr.J02496 Eucalyptus grandis HOM05D005912 ORTHO05D007329 1.0e-95 354.4 286 59.8
PSO675G2300 Papaver somniferum HOM05D005912 ORTHO05D007329 1.7e-95 353.6 359 51.0
Glyma.11G082400 Glycine max HOM05D005912 ORTHO05D007329 3.0e-95 352.8 286 58.7
Thhalv10025477m.g Eutrema salsugineum HOM05D005912 ORTHO05D007329 3.9e-95 352.4 292 56.5
COL.COLO4_09868 Corchorus olitorius HOM05D005912 ORTHO05D007329 5.0e-95 352.1 300 57.3
Phvul.002G112700 Phaseolus vulgaris HOM05D005912 ORTHO05D007329 5.0e-95 352.1 341 53.4
RcHm_v2.0_Chr2g0098181 Rosa chinensis HOM05D005912 ORTHO05D007329 6.6e-95 351.7 369 51.8
CARHR244100 Cardamine hirsuta HOM05D005912 ORTHO05D007329 1.5e-94 350.5 331 50.8
FAN26G2135 Fragaria x ananassa HOM05D005912 ORTHO05D007329 1.9e-94 350.1 366 52.2
Sed0007504 Sechium edule HOM05D005912 ORTHO05D007329 1.9e-94 350.1 289 56.7
Sp7g33520 Schrenkiella parvula HOM05D005912 ORTHO05D007329 3.3e-94 349.4 326 51.5
CsaV3_6G047590 Cucumis sativus L. HOM05D005912 ORTHO05D007329 5.6e-94 348.6 289 56.7
Migut.L00742 Erythranthe guttata HOM05D005912 ORTHO05D007329 9.5e-94 347.8 305 53.1
arahy.Tifrunner.gnm1.ann1.JJKM7S Arachis hypogaea HOM05D005912 ORTHO05D007329 1.2e-93 347.4 311 55.0
arahy.Tifrunner.gnm1.ann1.TNL2KY Arachis hypogaea HOM05D005912 ORTHO05D007329 1.2e-93 347.4 311 55.0
FAN23G1227 Fragaria x ananassa HOM05D005912 ORTHO05D007329 1.2e-93 347.4 362 52.5
Carub.0007s0449 Capsella rubella HOM05D005912 ORTHO05D007329 1.6e-93 347.1 329 49.5
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.6e-93 347.1 322 52.8
Cc07_g11440 Coffea canephora HOM05D005912 ORTHO05D007329 2.1e-93 346.7 296 57.4
AUR62029896 Chenopodium quinoa HOM05D005912 ORTHO05D007329 8.1e-93 344.7 304 54.3
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 8.1e-93 344.7 288 56.6
Lsat_1_v5_gn_2_75281 Lactuca sativa HOM05D005912 ORTHO05D007329 1.4e-92 344.0 322 52.2
Lj2g0008610 Lotus japonicus HOM05D005912 ORTHO05D007329 1.8e-92 343.6 312 55.4
Ciclev10025822m.g Citrus clementina HOM05D005912 ORTHO05D007329 2.3e-92 343.2 304 55.9
Os03g0131500 Oryza sativa ssp. japonica HOM05D005912 ORTHO05D007329 3.1e-92 342.8 341 51.3
Aa31LG6G12710 Aethionema arabicum HOM05D005912 ORTHO05D007329 4.0e-92 342.4 362 49.7
CSS0031078 Camellia sinensis var. sinensis HOM05D005912 ORTHO05D007329 5.2e-92 342.0 296 55.7
Lj2A487G56 Lonicera japonica HOM05D005912 ORTHO05D007329 5.2e-92 342.0 332 52.4
HanXRQChr07g0192501 Helianthus annuus HOM05D005912 ORTHO05D007329 6.8e-92 341.7 323 51.7
MD02G1122300 Malus domestica HOM05D005912 ORTHO05D007329 6.8e-92 341.7 327 52.6
Medtr5g023180 Medicago truncatula HOM05D005912 ORTHO05D007329 6.8e-92 341.7 320 54.4
Sopen02g028060 Solanum pennellii HOM05D005912 ORTHO05D007329 2.6e-91 339.7 293 54.3
CAN.G890.19 Capsicum annuum HOM05D005912 ORTHO05D007329 4.4e-91 339.0 293 54.6
PGSC0003DMG400001581 Solanum tuberosum HOM05D005912 ORTHO05D007329 4.4e-91 339.0 307 52.4
Ca_24951_v3 Cicer arietinum L. HOM05D005912 ORTHO05D007329 7.5e-91 338.2 339 51.9
TPR.G25119 Trifolium pratense HOM05D005912 ORTHO05D007329 7.5e-91 338.2 308 55.5
Ah.11g045130 Amaranthus hybridus HOM05D005912 ORTHO05D007329 1.3e-90 337.4 302 55.0
MSTRG.2738 Avicennia marina HOM05D005912 ORTHO05D007329 1.3e-90 337.4 314 52.9
HPP92_022166 Vanilla planifolia HOM05D005912 ORTHO05D007329 1.7e-90 337.0 289 56.7
Solyc02g083270.4 Solanum lycopersicum HOM05D005912 ORTHO05D007329 2.2e-90 336.7 307 52.4
Psat2g151360 Pisum sativum HOM05D005912 ORTHO05D007329 4.9e-90 335.5 310 55.2
ECA238G3446 Erigeron canadensis HOM05D005912 ORTHO05D007329 6.4e-90 335.1 331 51.1
EL10Ac5g11470 Beta vulgaris HOM05D005912 ORTHO05D007329 1.1e-89 334.3 311 55.0
Sc07g0001240 Simmondsia chinensis HOM05D005912 ORTHO05D007329 2.4e-89 333.2 293 53.6
HanXRQChr14g0442051 Helianthus annuus HOM05D005912 ORTHO05D007329 2.7e-88 329.7 323 52.0
BraA08t34122Z Brassica rapa HOM05D005912 ORTHO05D007329 5.1e-87 325.5 282 56.4
AL7G15340 Arabidopsis lyrata HOM05D005912 ORTHO05D007329 1.2e-83 314.3 279 53.0
SalBow3G0555 Salvia bowleyana HOM05D005912 ORTHO05D007329 3.4e-83 312.8 295 50.5
AT4G35760 Arabidopsis thaliana HOM05D005912 ORTHO05D007329 3.7e-82 309.3 257 55.6
Lalb_Chr05g0212091 Lupinus albus HOM05D005912 ORTHO05D007329 1.1e-81 307.8 298 50.7
AUR62033809 Chenopodium quinoa HOM05D005912 ORTHO05D007329 3.5e-80 302.8 263 54.0
SGA_v2.0_scaffold108G30993 Striga asiatica HOM05D005912 ORTHO05D007329 6.0e-80 302.0 297 49.5
Oeu012550.1 Olea europaea HOM05D005912 ORTHO05D007329 1.1e-78 297.7 295 50.2
GSVIVG01002335001 Vitis vinifera HOM05D005912 ORTHO05D007329 2.1e-77 293.5 271 56.1
Cpa.g.sc6.326 Carica papaya HOM05D005912 ORTHO05D007329 6.2e-77 292.0 289 52.6
MELO3C007950.2 Cucumis melo HOM05D005912 ORTHO05D007329 3.0e-71 273.1 287 48.1
CANSAT25G2212 Cannabis sativa HOM05D005912 ORTHO05D007329 1.8e-68 263.8 231 55.0
Mapoly0023s0120 Marchantia polymorpha HOM05D005912 ORTHO05D007329 1.8e-68 263.8 292 47.6
SMO119G0150 Selaginella moellendorffii HOM05D005912 ORTHO05D007329 1.8e-68 263.8 291 46.7
CBR_g79494 Chara braunii HOM05D005912 ORTHO05D007329 2.0e-67 260.4 346 40.8
Pp3c3_30980 Physcomitrium patens HOM05D005912 ORTHO05D007329 6.6e-63 245.4 287 45.6
unitig_88.g27769 Utricularia gibba HOM05D005912 ORTHO05D007329 9.9e-59 231.5 232 49.1
Glyma.01G161400 Glycine max HOM05D005912 ORTHO05D007329 2.7e-56 223.4 214 54.2
A08p21710 Brassica napus HOM05D000088 ORTHO05D000933 7.6e-51 205.3 299 41.8
C03p80880 Brassica napus HOM05D000088 ORTHO05D000933 7.6e-51 205.3 337 38.6
Migut.H02191 Erythranthe guttata HOM05D005912 ORTHO05D007329 3.8e-50 203.0 317 37.9
BolC3t20343H Brassica oleracea HOM05D000088 ORTHO05D000933 4.9e-50 202.6 337 38.6
VMungo1215G0927 Vigna mungo HOM05D005912 ORTHO05D007329 5.5e-49 199.1 173 56.6
Peaxi162Scf00300g00017 Petunia axillaris HOM05D005912 ORTHO05D007329 7.9e-48 195.3 232 46.1
DCAR_011589 Daucus carota HOM05D005912 ORTHO05D007329 3.3e-46 189.9 209 48.3
BcaC01g00519 Brassica carinata HOM05D005912 ORTHO05D007329 5.7e-46 189.1 251 44.2
SGA_v2.0_scaffold132G34545 Striga asiatica HOM05D005912 ORTHO05D007329 3.7e-45 186.4 168 51.8
BcaNung05729 Brassica carinata HOM05D005912 ORTHO05D007329 1.0e-42 178.3 208 44.2
Cre12.g493150 Chlamydomonas reinhardtii HOM05D005912 ORTHO05D007329 1.0e-42 178.3 282 36.5
MCO13G425 Micromonas commoda HOM05D005912 ORTHO05D007329 5.5e-41 172.6 292 37.0
SEGI_31957 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 4.6e-40 169.5 166 51.2
Actinidia22932 Actinidia chinensis HOM05D005912 ORTHO05D007329 1.3e-39 167.9 115 65.2
SGA_v2.0_scaffold132G34543 Striga asiatica HOM05D005912 ORTHO05D007329 1.3e-39 167.9 111 64.9
PRCOL_00003732 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 1.1e-36 158.3 285 36.5
MSTRG.15589 Avicennia marina HOM05D005912 ORTHO05D007329 4.5e-35 152.9 109 62.4
Pp3c1_24560 Physcomitrium patens HOM05D005912 ORTHO05D007329 1.9e-33 147.5 135 48.1
arahy.Tifrunner.gnm1.ann1.SP2XL4 Arachis hypogaea HOM05D005912 ORTHO05D007329 1.7e-29 134.4 123 53.7
AagrBONN_evm.TU.Sc2ySwM_340.180 Anthoceros agrestis HOM05D005912 ORTHO05D007329 1.2e-24 118.2 169 38.5
Lj2A933T26 Lonicera japonica HOM05D005912 ORTHO05D007329 2.1e-24 117.5 133 48.1
PRCOL_00002964 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 2.4e-20 104.0 112 51.8
Gohir.D03G004450 Gossypium hirsutum HOM05D005912 ORTHO05D007329 1.0e-18 98.6 63 68.3
AagrBONN_evm.TU.Sc2ySwM_228.1421 Anthoceros agrestis HOM05D005912 ORTHO05D007329 1.3e-18 98.2 165 35.2
Hma1.2p1_4017F.1_g338140 Hydrangea macrophylla HOM05D005912 ORTHO05D007329 2.9e-18 97.1 56 71.4
Lj2P933T24 Lonicera japonica HOM05D005912 ORTHO05D007329 1.5e-17 94.7 53 71.7
SEGI_22324 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 1.9e-17 94.4 63 61.9
Peaxi162Scf56132g00003 Petunia axillaris HOM05D005912 ORTHO05D007329 4.2e-17 93.2 67 56.7
MD15G1236200 Malus domestica HOM05D005912 ORTHO05D007329 5.5e-17 92.8 70 57.1
FAN28G1872 Fragaria x ananassa HOM05D005912 ORTHO05D007329 6.1e-16 89.4 69 58.0
MCO11G735 Micromonas commoda HOM05D005912 ORTHO05D007329 4.8e-13 79.7 95 41.1
Lj2A1074G31 Lonicera japonica HOM05D005912 ORTHO05D007329 1.1e-12 78.6 52 59.6
unitig_88.g27770 Utricularia gibba HOM05D005912 ORTHO05D007329 1.2e-11 75.1 53 54.7
SEGI_06824 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 9.4e-09 65.5 50 56.0


User provided reference genes

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