Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.2e-183 646.4 318 100.0
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 3.2e-128 462.2 313 71.9
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 2.5e-125 452.6 311 69.8
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 1.6e-124 449.9 306 71.2
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 2.1e-124 449.5 313 68.7
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 1.4e-123 446.8 309 70.9
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 1.8e-123 446.4 310 68.7
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 5.2e-123 444.9 316 67.7
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 2.0e-122 443.0 315 67.6
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 3.4e-122 442.2 309 68.0
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 2.2e-121 439.5 311 67.8
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 2.2e-121 439.5 307 70.0
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 1.1e-120 437.2 314 67.2
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 1.4e-120 436.8 306 67.6
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 1.4e-120 436.8 306 67.6
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 1.9e-120 436.4 302 69.5
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 2.4e-120 436.0 307 68.1
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 7.1e-120 434.5 309 67.3
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 9.2e-120 434.1 304 65.8
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 1.2e-119 433.7 314 66.9
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 1.6e-119 433.3 312 66.7
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.6e-119 433.3 306 67.3
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 1.6e-119 433.3 315 66.3
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 3.5e-119 432.2 317 65.6
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 4.6e-119 431.8 314 66.9
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 6.0e-119 431.4 307 67.8
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 1.0e-118 430.6 309 68.3
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 1.0e-118 430.6 308 67.9
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 1.0e-118 430.6 308 69.2
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 1.3e-118 430.3 314 67.2
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 1.3e-118 430.3 303 67.3
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 1.7e-118 429.9 309 67.0
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 1.7e-118 429.9 306 67.0
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.7e-118 429.9 314 65.9
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 2.3e-118 429.5 306 66.7
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 2.3e-118 429.5 312 65.1
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 5.1e-118 428.3 312 66.0
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 6.6e-118 427.9 303 68.0
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 1.9e-117 426.4 315 66.3
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.9e-117 426.4 309 65.7
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.9e-117 426.4 314 65.6
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 5.6e-117 424.9 305 66.9
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 5.6e-117 424.9 311 65.0
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 9.5e-117 424.1 305 66.2
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 1.6e-116 423.3 306 66.3
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 1.6e-116 423.3 313 65.8
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 2.1e-116 422.9 308 66.9
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 3.6e-116 422.2 308 66.2
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 3.1e-115 419.1 307 64.5
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 5.2e-115 418.3 310 64.8
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 1.2e-114 417.2 305 65.2
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 1.5e-114 416.8 312 64.1
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 4.4e-114 415.2 304 64.5
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 5.8e-114 414.8 327 63.3
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 1.3e-113 413.7 306 65.7
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 1.7e-113 413.3 313 63.6
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 3.8e-113 412.1 307 65.5
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 3.2e-112 409.1 314 65.0
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 4.6e-111 405.2 308 62.7
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 6.0e-111 404.8 300 65.3
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 2.3e-110 402.9 309 60.8
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 8.7e-110 401.0 307 62.2
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 2.5e-109 399.4 303 61.7
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 2.5e-109 399.4 308 63.0
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.3e-109 398.7 307 62.5
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.3e-109 398.7 307 62.5
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 4.3e-109 398.7 304 62.2
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 4.3e-109 398.7 304 63.2
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 5.6e-109 398.3 304 63.2
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 2.1e-108 396.4 303 61.1
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 9.0e-107 391.0 302 62.3
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 2.0e-106 389.8 306 63.1
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 6.0e-103 378.3 306 60.8
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 9.6e-101 370.9 259 69.9
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 9.6e-101 370.9 310 59.0
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 4.0e-99 365.5 280 62.1
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 9.0e-99 364.4 336 56.5
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 2.0e-98 363.2 287 61.0
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 4.9e-97 358.6 289 60.2
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 1.4e-91 340.5 253 66.8
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 3.0e-86 322.8 309 55.7
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 3.9e-86 322.4 305 55.1
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 8.7e-86 321.2 303 52.5
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 1.5e-85 320.5 238 68.9
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 3.3e-85 319.3 315 52.1
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 3.4e-82 309.3 220 69.5
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 1.4e-80 303.9 216 67.1
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 7.1e-80 301.6 301 48.8
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 1.5e-77 293.9 297 46.8
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.8e-75 287.0 326 52.8
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 5.5e-72 275.4 307 46.6
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 2.1e-71 273.5 305 49.2
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 3.7e-68 262.7 214 60.3
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.8e-67 260.4 304 48.0
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 3.4e-66 256.1 188 64.9
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 1.3e-65 254.2 302 43.4
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 5.0e-65 252.3 183 63.9
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 3.6e-63 246.1 354 37.3
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 2.0e-61 240.4 181 64.1
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 1.3e-52 211.1 259 41.3
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 8.2e-52 208.4 171 61.4
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 2.2e-41 173.7 200 47.5
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 3.2e-40 169.9 148 56.1
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 1.8e-38 164.1 211 47.4
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.3e-32 143.3 95 67.4
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 1.4e-30 137.9 100 68.0
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 5.7e-29 132.5 102 61.8
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 2.2e-28 130.6 348 29.0
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 2.8e-28 130.2 87 67.8
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 1.4e-27 127.9 94 70.2
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 1.6e-26 124.4 90 62.2
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.0e-25 121.7 285 29.5
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 4.7e-23 112.8 94 54.3
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 1.0e-22 111.7 101 55.4
Ca_09901_v3 Cicer arietinum L. HOM05D000916 ORTHO05D007921 1.8e-06 57.8 305 25.2
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 1.8e-06 57.8 30 76.7
MBI03_g28954_MAGBIO Magnolia biondii HOM05D000916 ORTHO05D007921 1.8e-06 57.8 140 32.1
arahy.Tifrunner.gnm1.ann1.G72GGE Arachis hypogaea HOM05D000916 ORTHO05D007921 4.0e-06 56.6 300 25.7
TWI12G0975 Tripterygium wilfordii HOM05D000916 ORTHO05D007921 6.8e-06 55.8 295 25.4


User provided reference genes

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