Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1225 Ceratophyllum demersum HOM05D000382 ORTHO05D130002 6.7e-57 223.8 112 100.0
CDE07G0077 Ceratophyllum demersum HOM05D000382 ORTHO05D004910 2.2e-36 155.6 81 93.8
MBI01_g15749_MAGBIO Magnolia biondii HOM05D000382 ORTHO05D004910 2.1e-10 69.3 72 54.2
MBI04_g14273_MAGBIO Magnolia biondii HOM05D000382 ORTHO05D004910 3.6e-10 68.6 86 50.0
CiPaw.10G028400 Carya illinoinensis HOM05D000382 ORTHO05D004910 1.5e-08 63.2 73 49.3
Nn2g15572 Nelumbo nucifera HOM05D000382 ORTHO05D004910 4.4e-08 61.6 95 43.2
Gohir.A09G126400 Gossypium hirsutum HOM05D000382 ORTHO05D004910 7.5e-08 60.8 89 40.4
Manes.09G031700 Manihot esculenta HOM05D000382 ORTHO05D004910 7.5e-08 60.8 82 43.9
Thecc.05G167800 Theobroma cacao HOM05D000382 ORTHO05D004910 7.5e-08 60.8 84 42.9
Gohir.D09G123100 Gossypium hirsutum HOM05D000382 ORTHO05D004910 9.8e-08 60.5 90 40.0
Manes.08G046700 Manihot esculenta HOM05D000382 ORTHO05D004910 1.3e-07 60.1 72 47.2
SalBow1G5711 Salvia bowleyana HOM05D000382 ORTHO05D004910 1.3e-07 60.1 48 62.5
SalBow1G5932 Salvia bowleyana HOM05D000382 ORTHO05D004910 1.3e-07 60.1 48 62.5
Duzib093G2119 Durio zibethinus HOM05D000382 ORTHO05D004910 1.7e-07 59.7 84 41.7
Duzib128G0782 Durio zibethinus HOM05D000382 ORTHO05D004910 1.7e-07 59.7 76 43.4
CAN.G128.31 Capsicum annuum HOM05D000382 ORTHO05D004910 3.7e-07 58.5 89 46.1
Dinv14269 Davidia involucrata HOM05D000382 ORTHO05D004910 3.7e-07 58.5 72 47.2
Gohir.A01G194600 Gossypium hirsutum HOM05D000382 ORTHO05D004910 3.7e-07 58.5 45 62.2
Gohir.D01G184800 Gossypium hirsutum HOM05D000382 ORTHO05D004910 3.7e-07 58.5 45 62.2
Gorai.002G228200 Gossypium raimondii HOM05D000382 ORTHO05D004910 3.7e-07 58.5 45 62.2
Peaxi162Scf00406g00716 Petunia axillaris HOM05D000382 ORTHO05D004910 4.8e-07 58.2 85 44.7
QL07p022812 Quercus lobata HOM05D000382 ORTHO05D004910 4.8e-07 58.2 72 47.2
TAR369G0758 Trochodendron aralioides HOM05D000382 ORTHO05D004910 4.8e-07 58.2 86 43.0
Haze_19946 Corylus avellana HOM05D000382 ORTHO05D004910 6.3e-07 57.8 37 67.6
Lalb_Chr18g0047641 Lupinus albus HOM05D000382 ORTHO05D004910 6.3e-07 57.8 71 50.7
Nn7g36064 Nelumbo nucifera HOM05D000382 ORTHO05D004910 6.3e-07 57.8 39 69.2
PGR004G2402 Punica granatum HOM05D000382 ORTHO05D004910 8.3e-07 57.4 92 43.5
COL.COLO4_36128 Corchorus olitorius HOM05D000382 ORTHO05D004910 1.1e-06 57.0 60 53.3
Gorai.006G141000 Gossypium raimondii HOM05D000382 ORTHO05D004910 1.4e-06 56.6 90 42.2
Lj5g0016375 Lotus japonicus HOM05D000382 ORTHO05D004910 1.4e-06 56.6 80 47.5
CSS0027990 Camellia sinensis var. sinensis HOM05D000382 ORTHO05D004910 1.8e-06 56.2 82 39.0
Lju124A32G74 Lonicera japonica HOM05D000382 ORTHO05D004910 1.8e-06 56.2 81 43.2
Atru.chr6.1988 Acer truncatum HOM05D000382 ORTHO05D004910 2.4e-06 55.8 85 45.9
Cc06_g16230 Coffea canephora HOM05D000382 ORTHO05D004910 2.4e-06 55.8 64 48.4
Medtr7g092750 Medicago truncatula HOM05D000382 ORTHO05D004910 2.4e-06 55.8 56 57.1
Cpa.g.sc85.93 Carica papaya HOM05D000382 ORTHO05D004910 3.1e-06 55.5 66 45.5
Glyma.02G176800 Glycine max HOM05D000382 ORTHO05D004910 3.1e-06 55.5 72 47.2
Glyma.10G092100 Glycine max HOM05D000382 ORTHO05D004910 3.1e-06 55.5 72 48.6
Potri.016G049200 Populus trichocarpa HOM05D000382 ORTHO05D004910 3.1e-06 55.5 84 42.9
Glyma.19G145300 Glycine max HOM05D000382 ORTHO05D004910 4.1e-06 55.1 59 55.9
SGA_v2.0_scaffold105G30473 Striga asiatica HOM05D000382 ORTHO05D004910 4.1e-06 55.1 48 56.2
TWI53G1207 Tripterygium wilfordii HOM05D000382 ORTHO05D004910 4.1e-06 55.1 69 52.2
Nitab4.5_0000016g0210 Nicotiana tabacum HOM05D000382 ORTHO05D004910 5.4e-06 54.7 81 45.7
Nitab4.5_0004063g0120 Nicotiana tabacum HOM05D000382 ORTHO05D004910 5.4e-06 54.7 114 36.8
Rhsim03G0009400 Rhododendron simsii HOM05D000382 ORTHO05D004910 5.4e-06 54.7 77 42.9
Rhsim03G0013100 Rhododendron simsii HOM05D000382 ORTHO05D004910 5.4e-06 54.7 77 42.9
Sabra06G0042300 Salix brachista HOM05D000382 ORTHO05D004910 5.4e-06 54.7 85 36.5
Duzib106G0645 Durio zibethinus HOM05D000382 ORTHO05D004910 7.0e-06 54.3 76 46.1
Nitab4.5_0006853g0020 Nicotiana tabacum HOM05D000382 ORTHO05D004910 7.0e-06 54.3 78 43.6
Oeu033181.1 Olea europaea HOM05D000382 ORTHO05D012544 7.0e-06 54.3 59 49.2
HPP92_003003 Vanilla planifolia HOM05D000382 ORTHO05D004910 7.0e-06 54.3 68 51.5
HPP92_003006 Vanilla planifolia HOM05D000382 ORTHO05D004910 7.0e-06 54.3 68 51.5
VMungo1383G0627 Vigna mungo HOM05D000382 ORTHO05D004910 9.1e-06 53.9 57 52.6


User provided reference genes

Program Settings