Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.6e-208 729.2 356 100.0
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 3.4e-203 711.4 356 97.5
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 2.4e-140 502.7 378 68.0
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 5.3e-140 501.5 378 67.7
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 1.2e-139 500.4 375 67.2
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 3.8e-138 495.4 378 66.9
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 4.2e-137 491.9 395 63.5
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 3.5e-136 488.8 385 65.2
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 1.5e-134 483.4 388 64.2
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 2.5e-134 482.6 361 67.9
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 9.6e-134 480.7 383 66.6
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 1.4e-132 476.9 388 63.7
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 2.4e-132 476.1 390 63.8
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 3.1e-132 475.7 375 65.3
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 3.1e-132 475.7 376 64.9
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 6.9e-132 474.6 381 64.0
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 1.2e-131 473.8 378 65.3
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 1.2e-131 473.8 383 64.5
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 5.8e-131 471.5 391 62.7
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.0e-130 470.7 383 64.2
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 1.3e-130 470.3 402 61.7
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 6.5e-130 468.0 412 60.7
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 3.2e-129 465.7 390 62.8
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 4.2e-129 465.3 427 58.1
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 5.5e-129 464.9 399 61.9
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 9.3e-129 464.2 392 63.0
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 2.1e-128 463.0 383 62.4
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 2.1e-128 463.0 372 64.2
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 2.7e-128 462.6 409 60.9
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 4.6e-128 461.8 361 65.7
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 3.9e-127 458.8 372 63.2
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 3.9e-127 458.8 392 63.0
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 5.1e-127 458.4 386 62.7
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 8.7e-127 457.6 416 59.1
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 1.9e-126 456.4 398 61.1
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 2.5e-126 456.1 364 64.8
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 2.5e-126 456.1 391 61.6
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 9.6e-126 454.1 394 60.7
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 1.6e-125 453.4 408 59.6
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 2.8e-125 452.6 410 59.3
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 8.2e-125 451.1 399 60.2
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 3.1e-124 449.1 399 60.2
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 5.3e-124 448.4 396 60.1
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 9.0e-124 447.6 392 59.7
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 1.2e-123 447.2 392 60.2
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 3.4e-123 445.7 394 59.6
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 3.4e-123 445.7 415 57.6
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 4.5e-123 445.3 394 59.9
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 3.8e-122 442.2 407 57.7
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 5.0e-122 441.8 406 57.9
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 1.1e-121 440.7 399 58.4
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 1.1e-121 440.7 406 58.6
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 1.9e-121 439.9 376 61.4
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 1.6e-120 436.8 382 59.9
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 2.7e-120 436.0 358 61.5
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 4.6e-120 435.3 375 60.8
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 6.1e-120 434.9 335 67.8
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 1.0e-119 434.1 410 56.6
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 3.0e-119 432.6 394 58.6
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 3.9e-119 432.2 376 60.6
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 3.3e-118 429.1 349 63.9
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 4.3e-118 428.7 398 58.3
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 1.3e-117 427.2 402 57.5
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 2.2e-117 426.4 344 64.8
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 2.8e-117 426.0 394 57.6
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 1.1e-116 424.1 354 61.9
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 2.4e-116 422.9 402 57.7
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 2.4e-116 422.9 402 57.7
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.4e-116 422.9 411 55.0
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 3.1e-116 422.5 353 62.3
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 6.9e-116 421.4 398 58.3
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 6.9e-116 421.4 398 58.3
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.9e-116 421.4 406 55.4
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 2.6e-115 419.5 326 65.6
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 2.6e-115 419.5 326 65.6
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.4e-115 419.1 409 54.8
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.5e-115 418.7 401 55.9
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 2.2e-114 416.4 337 63.5
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 2.2e-114 416.4 345 63.2
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 5.0e-114 415.2 398 56.5
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 8.5e-114 414.5 378 58.2
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 1.1e-113 414.1 405 54.8
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 2.5e-113 412.9 389 56.8
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 3.2e-113 412.5 342 62.3
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 3.2e-113 412.5 407 57.0
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 9.4e-113 411.0 401 55.1
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 3.6e-112 409.1 401 55.4
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 6.1e-112 408.3 392 55.6
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 7.9e-112 407.9 335 63.0
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 7.9e-112 407.9 340 64.7
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 2.3e-111 406.4 395 55.4
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 5.1e-111 405.2 401 54.9
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 5.1e-111 405.2 401 54.9
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 6.7e-111 404.8 303 67.7
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 2.0e-110 403.3 405 54.8
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 2.5e-110 402.9 377 55.2
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 2.5e-110 402.9 367 59.1
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 3.3e-110 402.5 396 55.6
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 9.7e-110 401.0 313 65.8
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 2.2e-109 399.8 294 68.7
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 2.8e-109 399.4 379 54.9
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 2.8e-109 399.4 467 49.3
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 3.7e-109 399.1 405 54.8
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.7e-109 399.1 379 54.9
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 6.3e-109 398.3 346 60.7
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.9e-108 394.8 379 54.6
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 1.2e-107 394.0 354 58.2
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 1.2e-107 394.0 401 53.9
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 1.4e-105 387.1 393 54.7
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 2.3e-103 379.8 339 59.0
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.7e-103 378.3 387 53.2
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 6.7e-103 378.3 333 62.5
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 1.1e-102 377.5 387 53.2
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.8e-101 372.9 408 51.5
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 1.9e-97 360.1 407 51.1
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 5.3e-92 342.0 383 49.6
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 2.2e-90 336.7 343 51.6
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 2.2e-90 336.7 404 48.8
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.5e-89 334.0 331 53.8
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 7.2e-89 331.6 376 50.8
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.4e-87 327.4 326 52.8
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 5.2e-87 325.5 325 54.2
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 3.4e-86 322.8 325 53.8
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 2.4e-84 316.6 294 55.8
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 5.0e-82 308.9 179 79.3
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 4.0e-79 299.3 363 48.2
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 6.8e-79 298.5 174 78.7
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 1.0e-66 258.1 274 54.7
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 2.1e-64 250.4 274 51.8
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 5.8e-62 242.3 127 85.0
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 3.0e-58 229.9 293 47.4
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 4.0e-55 219.5 254 52.0
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 6.4e-53 212.2 117 79.5
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 9.2e-52 208.4 109 85.3
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 1.9e-49 200.7 311 39.9
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 8.9e-47 191.8 113 73.5
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.4e-44 182.6 167 52.7
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 7.3e-41 172.2 145 64.8
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 2.4e-39 167.2 96 84.4
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 2.4e-39 167.2 93 77.4
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 1.1e-36 158.3 303 36.0
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 6.6e-34 149.1 141 54.6
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 5.5e-20 102.8 77 63.6
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 8.1e-16 89.0 78 51.3


User provided reference genes

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