Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 7.4e-112 407.1 196 100.0
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 4.5e-85 318.2 200 78.5
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 7.8e-85 317.4 203 76.8
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 7.8e-85 317.4 171 86.5
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 1.3e-84 316.6 185 81.6
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 8.6e-84 313.9 203 75.9
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 4.3e-83 311.6 202 75.7
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 4.3e-83 311.6 203 75.4
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 9.5e-83 310.5 194 78.4
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.2e-82 310.1 197 76.1
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 2.8e-82 308.9 197 74.6
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 8.0e-82 307.4 197 75.6
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 1.4e-81 306.6 205 74.1
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 1.4e-81 306.6 206 72.8
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 1.8e-81 306.2 203 74.4
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 2.3e-81 305.8 200 76.0
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 2.3e-81 305.8 196 75.5
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 2.3e-81 305.8 197 75.6
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.3e-81 305.8 197 75.6
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 4.0e-81 305.1 197 75.6
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 2.6e-80 302.4 194 76.3
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 3.4e-80 302.0 204 75.5
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 7.5e-80 300.8 197 72.6
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 1.3e-79 300.1 211 73.0
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 2.2e-79 299.3 199 73.4
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 2.9e-79 298.9 196 74.5
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 4.9e-79 298.1 201 72.1
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 4.9e-79 298.1 195 74.4
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 8.3e-79 297.4 205 72.2
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 1.1e-78 297.0 214 70.1
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 2.4e-78 295.8 202 72.3
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 3.2e-78 295.4 194 74.7
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 5.4e-78 294.7 172 80.8
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 9.2e-78 293.9 197 73.6
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 2.0e-77 292.7 174 78.7
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 2.0e-77 292.7 197 74.1
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 2.0e-77 292.7 194 74.2
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 2.7e-77 292.4 213 71.8
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 3.5e-77 292.0 199 73.9
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 4.6e-77 291.6 197 74.1
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 6.0e-77 291.2 198 72.2
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 7.8e-77 290.8 200 71.5
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 1.7e-76 289.7 191 72.8
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 2.3e-76 289.3 174 78.7
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 5.0e-76 288.1 218 65.1
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 5.0e-76 288.1 195 71.8
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 8.6e-76 287.3 169 80.5
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 8.6e-76 287.3 169 81.1
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 8.6e-76 287.3 169 81.1
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 8.6e-76 287.3 193 74.1
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 8.6e-76 287.3 169 81.1
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 8.6e-76 287.3 169 81.1
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 8.6e-76 287.3 169 81.1
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 1.1e-75 287.0 171 79.5
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 1.9e-75 286.2 200 71.5
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 2.5e-75 285.8 196 71.9
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 2.5e-75 285.8 197 73.6
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 2.5e-75 285.8 197 72.1
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 5.6e-75 284.6 172 79.1
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 5.6e-75 284.6 201 70.6
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 7.3e-75 284.3 162 81.5
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 9.5e-75 283.9 169 78.7
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 1.2e-74 283.5 183 73.2
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.2e-74 283.5 200 71.5
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 1.2e-74 283.5 194 72.2
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 1.6e-74 283.1 207 67.6
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 2.8e-74 282.3 169 79.3
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 2.8e-74 282.3 194 69.6
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 6.2e-74 281.2 184 71.2
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 6.2e-74 281.2 204 68.6
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 8.0e-74 280.8 170 76.5
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 1.8e-73 279.6 199 71.9
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 2.3e-73 279.3 194 69.1
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 4.0e-73 278.5 197 71.6
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 4.0e-73 278.5 194 68.6
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 4.0e-73 278.5 194 73.7
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 1.2e-72 276.9 174 77.0
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 1.2e-72 276.9 194 67.5
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.3e-71 273.5 153 84.3
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 6.0e-69 264.6 169 74.6
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 1.3e-68 263.5 171 73.7
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.7e-68 263.1 164 79.3
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 5.0e-68 261.5 205 63.4
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 6.2e-66 254.6 168 73.8
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 1.8e-65 253.1 141 80.9
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 1.5e-64 250.0 158 77.8
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 1.5e-64 250.0 171 72.5
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 2.0e-64 249.6 137 83.9
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.3e-63 246.9 173 71.1
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 1.3e-60 236.9 162 67.9
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 1.7e-60 236.5 146 77.4
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 3.0e-60 235.7 139 77.0
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 5.2e-57 224.9 181 63.5
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 1.5e-56 223.4 154 66.9
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 7.6e-56 221.1 189 57.1
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 9.2e-54 214.2 152 70.4
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 1.2e-53 213.8 111 88.3
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 1.3e-52 210.3 161 68.3
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 1.1e-46 190.7 169 55.6
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 2.8e-42 176.0 152 60.5
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 8.7e-28 127.9 144 42.4
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 2.2e-15 86.7 165 36.4
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 1.2e-13 80.9 133 39.8
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 6.3e-10 68.6 37 81.1
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 2.9e-07 59.7 132 31.1
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 5.0e-07 58.9 156 25.0
SMO356G0017 Selaginella moellendorffii HOM05D007351 ORTHO05D017832 2.5e-06 56.6 133 36.8
SEGI_25541 Sequoiadendron giganteum HOM05D007351 ORTHO05D017832 9.4e-06 54.7 137 30.7


User provided reference genes

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