Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 3.4e-161 571.6 290 100.0
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 7.6e-105 384.4 301 67.4
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 5.0e-104 381.7 311 65.3
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 1.1e-103 380.6 303 64.7
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 2.5e-103 379.4 311 64.6
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 2.5e-103 379.4 304 66.4
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 3.2e-103 379.0 291 66.3
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 7.2e-103 377.9 294 67.3
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.6e-102 376.7 289 69.6
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.6e-102 376.7 289 69.6
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 1.6e-102 376.7 314 62.1
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.6e-102 375.6 289 69.2
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 3.6e-102 375.6 309 64.7
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 7.9e-102 374.4 303 66.0
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 7.9e-102 374.4 317 64.0
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.0e-101 374.0 289 69.2
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 3.0e-101 372.5 289 65.7
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 5.1e-101 371.7 303 62.7
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 8.7e-101 370.9 301 66.4
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 4.3e-100 368.6 290 65.2
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 8.2e-99 364.4 297 63.6
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 1.1e-98 364.0 298 62.4
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 2.4e-98 362.8 297 63.6
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 3.1e-98 362.5 297 63.3
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 6.9e-98 361.3 297 64.0
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 9.0e-98 360.9 293 64.8
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 9.0e-98 360.9 262 69.5
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 1.2e-97 360.5 292 65.4
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 1.5e-97 360.1 288 66.0
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 2.6e-97 359.4 298 64.1
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 4.5e-97 358.6 297 62.6
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 5.9e-97 358.2 289 65.7
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 7.7e-97 357.8 292 65.1
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 2.9e-96 355.9 296 63.5
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 1.1e-95 354.0 305 62.3
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 4.2e-95 352.1 289 64.7
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 5.5e-95 351.7 297 61.3
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 7.9e-94 347.8 305 61.3
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 7.9e-94 347.8 293 61.8
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 1.0e-93 347.4 302 60.9
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 3.9e-93 345.5 291 63.6
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 2.8e-91 339.3 285 61.1
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 4.8e-91 338.6 301 61.8
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 4.8e-91 338.6 300 59.3
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 8.2e-91 337.8 301 61.5
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 8.2e-91 337.8 290 61.7
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 1.1e-90 337.4 309 59.2
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 1.1e-90 337.4 302 60.9
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.1e-90 335.9 286 64.0
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 2.6e-89 332.8 300 60.3
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 7.7e-89 331.3 267 64.8
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 1.0e-88 330.9 345 54.8
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 1.7e-88 330.1 299 60.2
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 3.8e-88 328.9 284 63.0
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 1.4e-87 327.0 289 59.5
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 2.5e-87 326.2 300 60.3
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 5.5e-87 325.1 263 65.4
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 7.2e-87 324.7 313 57.2
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 9.4e-87 324.3 268 64.2
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.6e-86 323.6 262 65.3
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.1e-86 323.2 288 62.5
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 1.8e-85 320.1 268 63.1
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 2.3e-85 319.7 299 57.5
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 3.9e-85 318.9 294 57.5
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 1.5e-84 317.0 312 56.7
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 3.7e-83 312.4 285 56.1
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 1.4e-82 310.5 334 54.5
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 3.5e-81 305.8 256 62.1
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 7.7e-81 304.7 307 55.7
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 3.2e-79 299.3 298 57.4
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 5.5e-79 298.5 310 54.8
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 9.4e-79 297.7 223 67.3
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 1.6e-78 297.0 276 59.8
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 3.6e-78 295.8 297 54.2
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 4.0e-77 292.4 284 56.3
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 2.0e-76 290.0 244 63.1
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.7e-75 285.8 285 57.9
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 3.1e-74 282.7 210 67.6
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 1.2e-70 270.8 211 64.0
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 6.1e-70 268.5 291 51.9
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 6.1e-70 268.5 212 64.2
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.5e-68 261.5 241 61.0
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 2.0e-65 253.4 283 49.5
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-62 244.2 190 67.4
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 1.6e-62 243.8 296 49.3
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.8e-62 243.0 262 55.3
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.4e-60 236.1 270 52.6
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.4e-60 236.1 276 51.1
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.8e-58 230.3 189 67.2
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.4e-58 229.9 295 51.2
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 1.3e-56 224.2 269 50.9
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 1.6e-54 217.2 343 40.2
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 2.8e-54 216.5 286 48.6
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.0e-53 213.0 174 66.1
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 4.9e-51 205.7 179 59.8
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 2.0e-49 200.3 170 60.6
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 5.9e-49 198.7 170 61.8
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 2.1e-46 190.3 126 73.8
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 2.6e-44 183.3 243 42.0
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 6.4e-43 178.7 253 41.5
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 6.6e-40 168.7 153 60.1
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 1.2e-36 157.9 283 38.2
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 6.0e-25 119.0 112 52.7
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 3.8e-19 99.8 95 56.8
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 3.8e-19 99.8 218 32.6
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 3.2e-18 96.7 96 55.2
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 1.0e-08 65.1 45 68.9


User provided reference genes

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