Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1109 Ceratophyllum demersum HOM05D003470 ORTHO05D004157 0.0e+00 1589.3 931 100.0
CDE03G0074 Ceratophyllum demersum HOM05D003470 ORTHO05D004157 0.0e+00 1253.4 970 74.7
Aqoxy1G01047 Aquilegia oxysepala HOM05D003470 ORTHO05D004157 1.8e-118 431.4 689 43.0
PSO339G3515 Papaver somniferum HOM05D003470 ORTHO05D004157 1.6e-116 424.9 689 41.8
PSO063G0006 Papaver somniferum HOM05D003470 ORTHO05D004157 1.5e-114 418.3 899 36.5
Nn6g35185 Nelumbo nucifera HOM05D003470 ORTHO05D004157 4.2e-104 383.6 708 40.3
TAR633G0390 Trochodendron aralioides HOM05D003470 ORTHO05D004157 1.1e-101 375.6 699 39.5
Nn2g13883 Nelumbo nucifera HOM05D003470 ORTHO05D004157 4.5e-98 363.6 687 39.3
TAR623G0591 Trochodendron aralioides HOM05D003470 ORTHO05D004157 5.9e-98 363.2 670 39.0
Duzib114G1051 Durio zibethinus HOM05D003470 ORTHO05D004157 5.0e-97 360.1 765 37.0
Gohir.A10G200100 Gossypium hirsutum HOM05D003470 ORTHO05D004157 7.2e-96 356.3 692 38.2
Thecc.10G090100 Theobroma cacao HOM05D003470 ORTHO05D004157 1.3e-94 352.1 691 37.3
Duzib106G0260 Durio zibethinus HOM05D003470 ORTHO05D004157 5.1e-94 350.1 675 38.4
MD14G1098000 Malus domestica HOM05D003470 ORTHO05D004157 2.8e-92 344.4 792 34.6
CSS0002390 Camellia sinensis var. sinensis HOM05D003470 ORTHO05D004157 1.1e-91 342.4 665 38.0
Gorai.011G233700 Gossypium raimondii HOM05D003470 ORTHO05D004157 2.0e-90 338.2 687 38.1
COL.COLO4_32876 Corchorus olitorius HOM05D003470 ORTHO05D004157 2.2e-89 334.7 689 35.7
Gohir.D10G208000 Gossypium hirsutum HOM05D003470 ORTHO05D004157 1.9e-88 331.6 687 37.7
TAR369G0117 Trochodendron aralioides HOM05D003470 ORTHO05D004157 9.4e-88 329.3 639 39.0
DCAR_006389 Daucus carota HOM05D003470 ORTHO05D004157 1.0e-86 325.9 692 35.7
AUR62035493 Chenopodium quinoa HOM05D003470 ORTHO05D004157 1.4e-83 315.5 689 34.3
Manes.10G053000 Manihot esculenta HOM05D003470 ORTHO05D004157 9.1e-83 312.8 686 36.0
Actinidia18557 Actinidia chinensis HOM05D003470 ORTHO05D004157 2.6e-82 311.2 665 37.0
Eucgr.G02735 Eucalyptus grandis HOM05D003470 ORTHO05D004157 3.4e-82 310.8 672 36.5
Ciclev10033678m.g Citrus clementina HOM05D003470 ORTHO05D004157 7.7e-82 309.7 677 36.2
GSVIVG01033709001 Vitis vinifera HOM05D003470 ORTHO05D004157 1.1e-80 305.8 645 36.1
TWI38G0957 Tripterygium wilfordii HOM05D003470 ORTHO05D004157 9.4e-80 302.8 689 33.4
ATR0043G047 Amborella trichopoda HOM05D003470 ORTHO05D004157 2.8e-76 291.2 686 34.0
Potri.008G029800 Populus trichocarpa HOM05D003470 ORTHO05D004157 4.8e-76 290.4 657 34.4
Sabra08G0020000 Salix brachista HOM05D003470 ORTHO05D004157 8.2e-76 289.7 956 29.5
CSS0012208 Camellia sinensis var. sinensis HOM05D003470 ORTHO05D004157 4.1e-75 287.3 694 34.6
MD12G1103600 Malus domestica HOM05D003470 ORTHO05D004157 3.5e-74 284.3 858 31.0
Atru.chr8.1716 Acer truncatum HOM05D003470 ORTHO05D004157 2.2e-73 281.6 677 34.3
Haze_19469 Corylus avellana HOM05D003470 ORTHO05D004157 1.1e-72 279.3 708 33.5
TWI74G0295 Tripterygium wilfordii HOM05D003470 ORTHO05D004157 2.5e-72 278.1 673 32.8
CSS0007947 Camellia sinensis var. sinensis HOM05D003470 ORTHO05D004157 3.2e-72 277.7 694 34.1
Dinv37350 Davidia involucrata HOM05D003470 ORTHO05D004157 1.0e-70 272.7 839 30.0
ECA238G1102 Erigeron canadensis HOM05D003470 ORTHO05D004157 1.0e-70 272.7 690 33.2
CiPaw.10G002200 Carya illinoinensis HOM05D003470 ORTHO05D004157 2.2e-68 265.0 695 31.8
Prupe.7G123700 Prunus persica HOM05D003470 ORTHO05D004157 2.8e-68 264.6 877 29.3
Haze_16780 Corylus avellana HOM05D003470 ORTHO05D004157 1.1e-67 262.7 499 37.7
Zm00001eb404310 Zea mays HOM05D003470 ORTHO05D004157 2.4e-67 261.5 668 31.9
Sc20g0001480 Simmondsia chinensis HOM05D003470 ORTHO05D004157 2.0e-66 258.5 689 32.4
GSVIVG01016161001 Vitis vinifera HOM05D003470 ORTHO05D004157 2.9e-65 254.6 662 33.7
Hund06764 Selenicereus undatus HOM05D003470 ORTHO05D004157 5.0e-65 253.8 600 32.7
RcHm_v2.0_Chr3g0471201 Rosa chinensis HOM05D003470 ORTHO05D004157 1.1e-64 252.7 712 31.7
Solyc11g007900.3 Solanum lycopersicum HOM05D003470 ORTHO05D004157 1.5e-64 252.3 664 31.3
QL07p041535 Quercus lobata HOM05D003470 ORTHO05D004157 1.9e-64 251.9 703 32.1
Sopen11g003760 Solanum pennellii HOM05D003470 ORTHO05D004157 2.5e-64 251.5 673 30.5
CAN.G135.27 Capsicum annuum HOM05D003470 ORTHO05D004157 3.0e-62 244.6 658 31.3
Nitab4.5_0004731g0020 Nicotiana tabacum HOM05D003470 ORTHO05D004157 4.4e-61 240.7 676 29.6
Sopen09g003360 Solanum pennellii HOM05D003470 ORTHO05D004157 9.8e-61 239.6 628 31.7
Solyc09g008530.3 Solanum lycopersicum HOM05D003470 ORTHO05D004157 1.7e-60 238.8 628 31.7
ClCG08G007930 Citrullus lanatus HOM05D003470 ORTHO05D004157 6.3e-60 236.9 500 35.0
PGR142G1299 Punica granatum HOM05D003470 ORTHO05D004157 2.4e-59 235.0 659 32.6
Nitab4.5_0000255g0010 Nicotiana tabacum HOM05D003470 ORTHO05D004157 4.1e-59 234.2 483 34.2
ECA233G4972 Erigeron canadensis HOM05D003470 ORTHO05D004157 2.0e-58 231.9 709 30.2
Rhsim03G0111500 Rhododendron simsii HOM05D003470 ORTHO05D004157 2.0e-58 231.9 670 33.1
Nitab4.5_0000593g0330 Nicotiana tabacum HOM05D003470 ORTHO05D004157 2.7e-58 231.5 528 33.5
CDE02G3590 Ceratophyllum demersum HOM05D003470 ORTHO05D004157 3.5e-58 231.1 485 36.1
Lj5g0020068 Lotus japonicus HOM05D003470 ORTHO05D004157 3.5e-58 231.1 848 29.6
Glyma.10G062800 Glycine max HOM05D003470 ORTHO05D004157 5.9e-58 230.3 672 31.4
HanXRQChr14g0456131 Helianthus annuus HOM05D003470 ORTHO05D004157 7.7e-58 229.9 632 31.8
Thecc.05G074600 Theobroma cacao HOM05D003470 ORTHO05D004157 1.7e-57 228.8 691 29.1
Haze_16781 Corylus avellana HOM05D003470 ORTHO05D004157 3.8e-57 227.6 507 34.9
Nitab4.5_0003906g0030 Nicotiana tabacum HOM05D003470 ORTHO05D004157 2.5e-56 224.9 648 30.9
PGSC0003DMG400003903 Solanum tuberosum HOM05D003470 ORTHO05D004157 3.2e-56 224.6 641 30.6
Cc06_g04710 Coffea canephora HOM05D003470 ORTHO05D004157 4.2e-56 224.2 628 32.8
Duzib128G1576 Durio zibethinus HOM05D003470 ORTHO05D004157 1.6e-55 222.2 692 30.1
CsaV3_3G036530 Cucumis sativus L. HOM05D003470 ORTHO05D004157 8.0e-55 219.9 672 29.5
CiPaw.09G004500 Carya illinoinensis HOM05D003470 ORTHO05D004157 1.8e-54 218.8 682 30.4
vmacro07200 Vaccinium macrocarpon HOM05D003470 ORTHO05D004157 2.3e-54 218.4 376 41.2
Sabra06G0094700 Salix brachista HOM05D003470 ORTHO05D004157 4.0e-54 217.6 678 29.9
Manes.08G016800 Manihot esculenta HOM05D003470 ORTHO05D004157 2.2e-52 211.8 682 30.8
HanXRQChr08g0218281 Helianthus annuus HOM05D003470 ORTHO05D004157 1.8e-51 208.8 691 28.5
Ca_10457_v3 Cicer arietinum L. HOM05D003470 ORTHO05D004157 4.1e-51 207.6 494 32.4
Lsat_1_v5_gn_2_103301 Lactuca sativa HOM05D003470 ORTHO05D004157 5.4e-51 207.2 869 28.0
Sed0009504 Sechium edule HOM05D003470 ORTHO05D004157 9.2e-51 206.5 515 31.7
MELO3C009401.2 Cucumis melo HOM05D003470 ORTHO05D004157 1.6e-50 205.7 895 25.9
Potri.006G120400 Populus trichocarpa HOM05D003470 ORTHO05D004157 1.6e-50 205.7 682 29.3
FvH4_6g17113 Fragaria vesca HOM05D003470 ORTHO05D004157 5.9e-50 203.8 906 26.7
Gohir.A09G143900 Gossypium hirsutum HOM05D003470 ORTHO05D004157 1.3e-49 202.6 695 28.1
Phvul.007G226600 Phaseolus vulgaris HOM05D003470 ORTHO05D004157 2.9e-49 201.4 707 29.1
Zm00001eb000590 Zea mays HOM05D003470 ORTHO05D004157 5.0e-49 200.7 659 27.9
FAN14G5641 Fragaria x ananassa HOM05D003470 ORTHO05D004157 6.6e-49 200.3 906 26.3
Sc06g0002130 Simmondsia chinensis HOM05D003470 ORTHO05D004157 8.6e-49 199.9 557 30.5
Glyma.10G198700 Glycine max HOM05D003470 ORTHO05D004157 2.5e-48 198.4 441 33.3
Psat6g173600 Pisum sativum HOM05D003470 ORTHO05D004157 2.5e-48 198.4 480 32.5
Atru.chr12.915 Acer truncatum HOM05D003470 ORTHO05D004157 1.6e-47 195.7 373 39.9
Lj3C994T12 Lonicera japonica HOM05D003470 ORTHO05D004157 1.6e-47 195.7 664 30.1
FAN05G3818 Fragaria x ananassa HOM05D003470 ORTHO05D004157 4.7e-47 194.1 906 26.0
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 3.0e-46 191.4 695 27.9
Medtr1g090807 Medicago truncatula HOM05D003470 ORTHO05D004157 1.2e-45 189.5 454 32.6
Peaxi162Scf00543g00019 Petunia axillaris HOM05D003470 ORTHO05D004157 1.2e-45 189.5 489 31.5
Rhsim03G0087000 Rhododendron simsii HOM05D003470 ORTHO05D004157 1.2e-45 189.5 689 29.5
HPP92_008497 Vanilla planifolia HOM05D003470 ORTHO05D004157 4.4e-45 187.6 689 29.2
Lsat_1_v5_gn_6_28040 Lactuca sativa HOM05D003470 ORTHO05D004157 1.3e-44 186.0 697 29.0
Ca_11537_v3 Cicer arietinum L. HOM05D003470 ORTHO05D004157 2.2e-44 185.3 698 27.1
TPR.G22446 Trifolium pratense HOM05D003470 ORTHO05D004157 3.2e-43 181.4 694 27.8
TPR.G37812 Trifolium pratense HOM05D003470 ORTHO05D004157 3.2e-43 181.4 470 32.1
FAN05G4328 Fragaria x ananassa HOM05D003470 ORTHO05D004157 9.2e-43 179.9 906 25.4
Phvul.007G145600 Phaseolus vulgaris HOM05D003470 ORTHO05D004157 3.5e-42 177.9 482 29.7
VMungo0720G1037 Vigna mungo HOM05D003470 ORTHO05D004157 7.8e-42 176.8 482 28.8
FAN09G0366 Fragaria x ananassa HOM05D003470 ORTHO05D004157 1.0e-41 176.4 908 25.3
Oeu026700.1 Olea europaea HOM05D003470 ORTHO05D004157 1.0e-41 176.4 611 30.3
Cpa.g.sc53.171 Carica papaya HOM05D003470 ORTHO05D004157 1.7e-41 175.6 337 38.9
Migut.J00469 Erythranthe guttata HOM05D003470 ORTHO05D004157 8.6e-41 173.3 594 28.3
Actinidia26639 Actinidia chinensis HOM05D003470 ORTHO05D004157 1.1e-40 172.9 696 28.4
Glyma.13G147300 Glycine max HOM05D003470 ORTHO05D004157 1.9e-40 172.2 672 28.1
Zm00001eb391920 Zea mays HOM05D003470 ORTHO05D004157 1.2e-39 169.5 694 26.1
SalBow3G0781 Salvia bowleyana HOM05D003470 ORTHO05D004157 2.8e-39 168.3 620 27.7
MSTRG.19203 Avicennia marina HOM05D003470 ORTHO05D004157 1.4e-38 166.0 659 28.7
Duzib093G1940 Durio zibethinus HOM05D003470 ORTHO05D004157 2.3e-38 165.2 695 26.0
ECA233G0686 Erigeron canadensis HOM05D003470 ORTHO05D004157 5.2e-38 164.1 697 27.0
Lalb_Chr02g0151131 Lupinus albus HOM05D003470 ORTHO05D004157 8.9e-38 163.3 476 31.3
Actinidia28929 Actinidia chinensis HOM05D003470 ORTHO05D004157 4.4e-37 161.0 516 31.0
Cpa.g.sc5.136 Carica papaya HOM05D003470 ORTHO05D004157 8.3e-36 156.8 606 28.1
CDE02G1862 Ceratophyllum demersum HOM05D003470 ORTHO05D004157 5.4e-35 154.1 186 51.1
Peaxi162Scf00138g00213 Petunia axillaris HOM05D003470 ORTHO05D004157 1.2e-34 152.9 843 26.8
CANSAT78G0551 Cannabis sativa HOM05D003470 ORTHO05D004157 1.0e-33 149.8 701 29.2
PSO478G4813 Papaver somniferum HOM05D003470 ORTHO05D004157 3.0e-33 148.3 424 30.0
Gorai.006G160300 Gossypium raimondii HOM05D003470 ORTHO05D004157 2.1e-31 142.1 980 23.6
vmacro07330 Vaccinium macrocarpon HOM05D003470 ORTHO05D004157 6.2e-31 140.6 636 26.9
SalBow6G0046 Salvia bowleyana HOM05D003470 ORTHO05D004157 2.6e-29 135.2 513 27.1
COL.COLO4_22242 Corchorus olitorius HOM05D003470 ORTHO05D004157 3.2e-27 128.3 354 32.8
SEGI_27097 Sequoiadendron giganteum HOM05D003470 ORTHO05D004157 1.6e-26 125.9 637 25.0
Dinv31268 Davidia involucrata HOM05D003470 ORTHO05D004157 2.7e-26 125.2 323 31.0
Medtr1g062200 Medicago truncatula HOM05D003470 ORTHO05D004157 2.7e-26 125.2 701 24.0
ClCG10G019700 Citrullus lanatus HOM05D003470 ORTHO05D004157 3.5e-26 124.8 810 23.8
Os10g0547000 Oryza sativa ssp. japonica HOM05D003470 ORTHO05D004157 6.0e-26 124.0 403 34.2
AUR62019445 Chenopodium quinoa HOM05D002464 ORTHO05D002530 3.9e-25 121.3 164 42.7
Lj5g0018822 Lotus japonicus HOM05D003470 ORTHO05D004157 3.9e-25 121.3 478 26.4
Ca_11528_v3 Cicer arietinum L. HOM05D003470 ORTHO05D004157 1.1e-24 119.8 672 24.7
Gohir.D09G139850 Gossypium hirsutum HOM05D003470 ORTHO05D004157 5.6e-24 117.5 488 26.0
CAN.G1038.4 Capsicum annuum HOM05D003470 ORTHO05D004157 9.5e-24 116.7 678 25.1
AagrBONN_evm.TU.Sc2ySwM_344.3028 Anthoceros agrestis HOM05D003470 ORTHO05D004157 2.1e-23 115.5 511 25.2
VMungo0720G2647 Vigna mungo HOM05D003470 ORTHO05D000001 3.1e-22 111.7 673 27.2
SEGI_39816 Sequoiadendron giganteum HOM05D003470 ORTHO05D004157 4.0e-22 111.3 511 24.3
Eucgr.A01602 Eucalyptus grandis HOM05D003470 ORTHO05D004157 1.5e-21 109.4 964 22.2
SMO301G0074 Selaginella moellendorffii HOM05D004450 ORTHO05D004157 1.5e-21 109.4 704 26.7
Haze_16782 Corylus avellana HOM05D003470 ORTHO05D004157 2.6e-21 108.6 128 51.6
HanXRQChr13g0400491 Helianthus annuus HOM05D003470 ORTHO05D004157 1.1e-19 103.2 481 27.0
Lj3A935T49 Lonicera japonica HOM05D003470 ORTHO05D004157 2.4e-19 102.1 351 31.3
Sed0013053 Sechium edule HOM05D003470 ORTHO05D004157 3.2e-19 101.7 842 24.0
Migut.F01673 Erythranthe guttata HOM05D003470 ORTHO05D004157 1.6e-18 99.4 722 26.9
Lsat_1_v5_gn_8_17720 Lactuca sativa HOM05D003470 ORTHO05D004157 6.0e-18 97.4 340 27.6
Gohir.D10G208200 Gossypium hirsutum HOM05D003470 ORTHO05D022439 2.8e-15 88.6 189 34.9
Actinidia28930 Actinidia chinensis HOM05D003470 ORTHO05D004157 3.6e-15 88.2 114 45.6
Gorai.011G233900 Gossypium raimondii HOM05D003470 ORTHO05D022439 4.7e-15 87.8 189 34.9
Psat6g076760 Pisum sativum HOM05D003470 ORTHO05D004157 4.7e-15 87.8 424 27.8
Atru.chr12.916 Acer truncatum HOM05D003470 ORTHO05D004157 5.2e-14 84.3 158 35.4
Thecc.10G089600 Theobroma cacao HOM05D003470 ORTHO05D022439 1.2e-13 83.2 212 33.5
Gohir.A10G200300 Gossypium hirsutum HOM05D003470 ORTHO05D022439 1.5e-13 82.8 292 27.7
COL.COLO4_32886 Corchorus olitorius HOM05D003470 ORTHO05D022439 2.2e-12 79.0 264 27.7
Sed0006633 Sechium edule HOM05D003470 ORTHO05D004157 2.2e-12 79.0 563 22.4
Dinv31267 Davidia involucrata HOM05D003470 ORTHO05D004157 2.9e-12 78.6 138 39.9
arahy.Tifrunner.gnm1.ann1.8W3QW7 Arachis hypogaea HOM05D003470 ORTHO05D004157 4.6e-10 71.2 579 22.3
arahy.Tifrunner.gnm1.ann1.FKX1H2 Arachis hypogaea HOM05D003470 ORTHO05D004157 4.6e-10 71.2 579 22.3
QL12p036511 Quercus lobata HOM05D000176 ORTHO05D000106 1.3e-09 69.7 112 42.0
Duzib128G1410 Durio zibethinus HOM05D003470 ORTHO05D022439 1.9e-08 65.9 294 24.8
HanXRQChr07g0186251 Helianthus annuus HOM05D003470 ORTHO05D004157 1.9e-08 65.9 285 27.7
QL02p062649 Quercus lobata HOM05D000176 ORTHO05D000106 1.9e-08 65.9 235 29.8
SEGI_03196 Sequoiadendron giganteum HOM05D004450 ORTHO05D022914 7.3e-08 63.9 103 37.9
SGA_v2.0_scaffold40G15455 Striga asiatica HOM05D003470 ORTHO05D003317 2.1e-07 62.4 324 24.7
CSS0015865 Camellia sinensis var. sinensis HOM05D004450 ORTHO05D005491 1.4e-06 59.7 103 37.9
CSS0047020 Camellia sinensis var. sinensis HOM05D004450 ORTHO05D005491 1.4e-06 59.7 103 37.9
Aqoxy6G00526 Aquilegia oxysepala HOM05D004450 ORTHO05D005491 1.8e-06 59.3 100 35.0
SEGI_32626 Sequoiadendron giganteum HOM05D003470 ORTHO05D004157 2.4e-06 58.9 50 60.0
ClCG03G008890 Citrullus lanatus HOM05D004450 ORTHO05D005491 5.3e-06 57.8 207 29.0
DCAR_008706 Daucus carota HOM05D004450 ORTHO05D005491 5.3e-06 57.8 104 37.5
Prupe.1G510000 Prunus persica HOM05D004450 ORTHO05D005491 5.3e-06 57.8 102 35.3
RcHm_v2.0_Chr7g0240181 Rosa chinensis HOM05D004450 ORTHO05D005491 6.9e-06 57.4 102 36.3
Actinidia10291 Actinidia chinensis HOM05D004450 ORTHO05D005491 9.0e-06 57.0 103 35.9
Eucgr.H00921 Eucalyptus grandis HOM05D004450 ORTHO05D005491 9.0e-06 57.0 102 35.3
Rhsim06G0086600 Rhododendron simsii HOM05D004450 ORTHO05D005491 9.0e-06 57.0 103 36.9


User provided reference genes

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