Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 3.3e-175 618.2 301 100.0
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 2.9e-67 259.6 300 46.7
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 5.2e-64 248.8 301 44.9
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 4.4e-63 245.7 292 43.5
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 1.6e-60 237.3 301 43.2
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 3.5e-60 236.1 291 44.0
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 6.0e-60 235.3 292 43.8
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 7.8e-60 235.0 279 44.8
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 1.0e-59 234.6 281 45.9
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 1.3e-59 234.2 293 44.0
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 2.3e-59 233.4 298 44.0
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 3.9e-59 232.6 297 42.4
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 5.0e-59 232.3 292 43.5
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 1.1e-58 231.1 325 40.9
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 4.3e-58 229.2 285 41.4
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 5.6e-58 228.8 296 41.2
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 4.7e-57 225.7 309 39.8
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 1.8e-56 223.8 299 39.8
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 3.1e-56 223.0 296 40.2
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 8.9e-56 221.5 296 39.5
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 3.4e-55 219.5 300 38.0
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 4.4e-55 219.2 305 41.0
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 4.4e-55 219.2 273 42.9
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 5.8e-55 218.8 292 40.8
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 5.8e-55 218.8 297 41.4
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 7.5e-55 218.4 272 41.5
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 1.2e-52 211.1 302 39.4
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 3.5e-52 209.5 287 41.1
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 6.0e-52 208.8 291 41.6
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 1.1e-50 204.5 289 39.4
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 5.6e-50 202.2 303 37.6
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 2.1e-49 200.3 295 37.6
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 8.1e-49 198.4 261 41.0
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 2.3e-48 196.8 315 36.8
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 1.2e-47 194.5 301 35.5
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 1.1e-45 188.0 299 37.1
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 4.1e-45 186.0 292 38.4
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 1.2e-44 184.5 298 39.3
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 1.2e-44 184.5 193 48.7
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 1.6e-44 184.1 301 38.5
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 2.1e-44 183.7 265 38.5
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 4.6e-44 182.6 289 37.0
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 3.0e-43 179.9 265 37.4
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 4.3e-42 176.0 302 35.8
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 2.1e-41 173.7 308 34.7
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 4.7e-41 172.6 313 34.5
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 4.7e-41 172.6 321 34.6
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 6.2e-41 172.2 300 35.7
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 3.1e-40 169.9 298 36.2
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 8.9e-40 168.3 232 37.9
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 8.9e-40 168.3 225 40.0
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 1.2e-39 167.9 296 36.1
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 4.4e-39 166.0 300 35.3
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 4.4e-39 166.0 360 29.2
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 9.9e-39 164.9 297 35.0
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 1.3e-38 164.5 293 35.2
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 2.2e-38 163.7 296 35.1
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 4.9e-38 162.5 297 35.0
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 4.9e-38 162.5 297 35.0
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 4.9e-38 162.5 299 33.8
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 8.4e-38 161.8 300 34.7
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 1.1e-37 161.4 297 34.7
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 1.2e-36 157.9 300 32.0
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 2.3e-35 153.7 214 37.9
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 8.7e-35 151.8 285 33.7
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 1.5e-34 151.0 295 32.5
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 1.9e-34 150.6 168 43.5
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 2.8e-33 146.7 287 31.7
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 6.2e-33 145.6 287 31.0
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 3.4e-31 139.8 196 39.8
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 9.9e-31 138.3 210 38.6
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 1.7e-30 137.5 204 39.2
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 1.9e-29 134.0 294 31.0
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 2.7e-28 130.2 192 39.1
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 1.3e-27 127.9 263 28.9
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 2.3e-27 127.1 170 40.6
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 1.3e-25 121.3 296 30.4
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 1.2e-20 104.8 258 28.7
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 4.8e-17 92.8 279 29.0
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 1.4e-16 91.3 237 30.0
MD02G1010000 Malus domestica HOM05D003067 ORTHO05D009378 5.8e-15 85.9 93 43.0
Nitab4.5_0000525g0300 Nicotiana tabacum HOM05D003067 ORTHO05D009378 3.2e-13 80.1 201 29.4
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 7.9e-12 75.5 161 31.1
GSVIVG01003739001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.3e-11 74.7 49 67.3
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 8.7e-11 72.0 152 29.6
SEGI_40030 Sequoiadendron giganteum HOM05D023718 ORTHO05D009378 7.4e-10 68.9 127 33.1
Nitab4.5_0001478g0160 Nicotiana tabacum HOM05D003067 ORTHO05D009378 4.0e-08 63.2 156 25.0
Nitab4.5_0008862g0010 Nicotiana tabacum HOM05D003067 ORTHO05D009378 3.4e-07 60.1 134 29.1
Aa31LG2G19330 Aethionema arabicum HOM05D003067 ORTHO05D009378 2.9e-06 57.0 118 28.8


User provided reference genes

Program Settings