Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1059 Ceratophyllum demersum HOM05D005903 ORTHO05D007293 9.1e-187 656.8 332 100.0
TAR624G0428 Trochodendron aralioides HOM05D005903 ORTHO05D007293 2.7e-98 362.8 333 57.4
Nn7g38356 Nelumbo nucifera HOM05D005903 ORTHO05D007293 3.3e-96 355.9 337 54.9
Dinv07001 Davidia involucrata HOM05D005903 ORTHO05D007293 2.2e-95 353.2 331 57.1
Atru.chr10.296 Acer truncatum HOM05D005903 ORTHO05D007293 1.2e-93 347.4 335 54.0
GSVIVG01012154001 Vitis vinifera HOM05D005903 ORTHO05D007293 5.9e-93 345.1 335 55.2
CiPaw.09G138500 Carya illinoinensis HOM05D005903 ORTHO05D007293 1.0e-92 344.4 332 54.8
QL11p012010 Quercus lobata HOM05D005903 ORTHO05D007293 1.3e-92 344.0 331 54.7
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 5.0e-92 342.0 336 55.1
BolC3t19474H Brassica oleracea HOM05D005903 ORTHO05D007293 1.4e-91 340.5 330 55.8
Thhalv10011094m.g Eutrema salsugineum HOM05D005903 ORTHO05D007293 1.4e-91 340.5 329 55.3
Cpa.g.sc30.99 Carica papaya HOM05D005903 ORTHO05D007293 1.9e-91 340.1 334 55.1
Sp1g31680 Schrenkiella parvula HOM05D005903 ORTHO05D007293 1.9e-91 340.1 331 54.7
BcaC01g01793 Brassica carinata HOM05D005903 ORTHO05D007293 3.2e-91 339.3 330 55.5
C03p71840 Brassica napus HOM05D005903 ORTHO05D007293 3.2e-91 339.3 330 55.5
BraA06t25085Z Brassica rapa HOM05D005903 ORTHO05D007293 3.2e-91 339.3 330 55.2
A06p19990 Brassica napus HOM05D005903 ORTHO05D007293 5.5e-91 338.6 330 55.2
AT3G47630 Arabidopsis thaliana HOM05D005903 ORTHO05D007293 7.2e-91 338.2 330 54.5
PGR044G2521 Punica granatum HOM05D005903 ORTHO05D007293 7.2e-91 338.2 336 53.6
C08p34580 Brassica napus HOM05D005903 ORTHO05D007293 9.4e-91 337.8 330 54.8
BolC8t51059H Brassica oleracea HOM05D005903 ORTHO05D007293 1.2e-90 337.4 330 54.8
Thecc.02G003100 Theobroma cacao HOM05D005903 ORTHO05D007293 1.2e-90 337.4 333 53.5
BcaB01g00896 Brassica carinata HOM05D005903 ORTHO05D007293 6.1e-90 335.1 330 54.8
BcaC07g40489 Brassica carinata HOM05D005903 ORTHO05D007293 8.0e-90 334.7 330 54.5
Migut.G01043 Erythranthe guttata HOM05D005903 ORTHO05D007293 8.0e-90 334.7 336 53.0
FAN25G2454 Fragaria x ananassa HOM05D005903 ORTHO05D007293 8.0e-90 334.7 342 53.5
Aa31LG9G16250 Aethionema arabicum HOM05D005903 ORTHO05D007293 1.0e-89 334.3 329 55.3
FAN16G3015 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.0e-89 334.3 342 53.2
Potri.001G076200 Populus trichocarpa HOM05D005903 ORTHO05D007293 1.0e-89 334.3 335 53.7
BraA09t40620Z Brassica rapa HOM05D005903 ORTHO05D007293 1.8e-89 333.6 330 54.2
FAN21G0687 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.8e-89 333.6 330 53.9
RcHm_v2.0_Chr5g0021241 Rosa chinensis HOM05D005903 ORTHO05D007293 3.0e-89 332.8 342 53.5
Manes.03G070940 Manihot esculenta HOM05D005903 ORTHO05D007293 3.9e-89 332.4 333 53.2
Nitab4.5_0010610g0030 Nicotiana tabacum HOM05D005903 ORTHO05D007293 3.9e-89 332.4 335 52.5
Eucgr.A00192 Eucalyptus grandis HOM05D005903 ORTHO05D007293 5.2e-89 332.0 332 52.7
A09p51850 Brassica napus HOM05D005903 ORTHO05D007293 6.7e-89 331.6 330 53.9
FAN11G1857 Fragaria x ananassa HOM05D005903 ORTHO05D007293 6.7e-89 331.6 342 52.9
PSO675G2427 Papaver somniferum HOM05D005903 ORTHO05D007293 8.8e-89 331.3 336 52.7
FvH4_3g13050 Fragaria vesca HOM05D005903 ORTHO05D007293 2.0e-88 330.1 342 52.6
Carub.0005s1376 Capsella rubella HOM05D005903 ORTHO05D007293 3.3e-88 329.3 331 52.9
AL5G26920 Arabidopsis lyrata HOM05D005903 ORTHO05D007293 4.4e-88 328.9 331 53.2
CARHR156310 Cardamine hirsuta HOM05D005903 ORTHO05D007293 7.4e-88 328.2 331 53.2
ATR0605G282 Amborella trichopoda HOM05D005903 ORTHO05D007293 9.7e-88 327.8 328 54.0
Migut.M02015 Erythranthe guttata HOM05D005903 ORTHO05D007293 1.7e-87 327.0 323 53.6
MD05G1245400 Malus domestica HOM05D005903 ORTHO05D007293 2.2e-87 326.6 340 52.1
Cc09_g05110 Coffea canephora HOM05D005903 ORTHO05D007293 2.8e-87 326.2 333 54.1
Gohir.A11G047300 Gossypium hirsutum HOM05D005903 ORTHO05D007293 3.7e-87 325.9 333 52.0
Gohir.D11G050900 Gossypium hirsutum HOM05D005903 ORTHO05D007293 4.8e-87 325.5 333 52.3
PGSC0003DMG400007316 Solanum tuberosum HOM05D005903 ORTHO05D007293 1.1e-86 324.3 335 51.9
Gorai.007G055300 Gossypium raimondii HOM05D005903 ORTHO05D007293 1.4e-86 323.9 333 52.0
Nitab4.5_0000844g0290 Nicotiana tabacum HOM05D005903 ORTHO05D007293 3.1e-86 322.8 331 51.7
CAN.G809.52 Capsicum annuum HOM05D005903 ORTHO05D007293 1.6e-85 320.5 333 51.7
HanXRQChr12g0369311 Helianthus annuus HOM05D005903 ORTHO05D007293 1.6e-85 320.5 336 52.7
vmacro03560 Vaccinium macrocarpon HOM05D005903 ORTHO05D007293 1.6e-85 320.5 349 51.0
MELO3C007010.2 Cucumis melo HOM05D005903 ORTHO05D007293 2.6e-85 319.7 337 52.5
CANSAT35G1866 Cannabis sativa HOM05D005903 ORTHO05D007293 4.5e-85 318.9 330 52.7
Cc00_g27340 Coffea canephora HOM05D005903 ORTHO05D007293 7.7e-85 318.2 323 53.9
CsaV3_6G052990 Cucumis sativus L. HOM05D005903 ORTHO05D007293 1.0e-84 317.8 337 51.9
Lj4g0014401 Lotus japonicus HOM05D005903 ORTHO05D007293 1.0e-84 317.8 328 50.9
Solyc02g081840.4 Solanum lycopersicum HOM05D005903 ORTHO05D007293 2.2e-84 316.6 331 51.4
Aqoxy7G00859 Aquilegia oxysepala HOM05D005903 ORTHO05D007293 3.8e-84 315.8 336 52.7
Dinv26323 Davidia involucrata HOM05D005903 ORTHO05D007293 3.8e-84 315.8 304 55.9
ClCG01G025750 Citrullus lanatus HOM05D005903 ORTHO05D007293 6.5e-84 315.1 341 51.6
EL10Ac5g11217 Beta vulgaris HOM05D005903 ORTHO05D007293 1.9e-83 313.5 335 51.3
Glyma.05G134300 Glycine max HOM05D005903 ORTHO05D007293 1.6e-82 310.5 324 52.5
Lsat_1_v5_gn_1_24420 Lactuca sativa HOM05D005903 ORTHO05D007293 1.6e-82 310.5 321 52.3
Medtr4g094760 Medicago truncatula HOM05D005903 ORTHO05D007293 4.7e-82 308.9 324 51.5
DCAR_003756 Daucus carota HOM05D005903 ORTHO05D007293 1.8e-81 307.0 368 47.6
Ciclev10016117m.g Citrus clementina HOM05D005903 ORTHO05D007293 3.0e-81 306.2 302 53.3
Glyma.08G089000 Glycine max HOM05D005903 ORTHO05D007293 3.0e-81 306.2 321 52.3
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 3.0e-81 306.2 339 51.0
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 5.2e-81 305.4 339 51.0
ECA247G0018 Erigeron canadensis HOM05D005903 ORTHO05D007293 6.7e-81 305.1 323 51.7
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 8.8e-81 304.7 325 50.2
Ca_18231_v3 Cicer arietinum L. HOM05D005903 ORTHO05D007293 2.6e-80 303.1 324 50.0
THA.LOC104812245 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 2.6e-80 303.1 371 46.4
THA.LOC104824626 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 2.6e-80 303.1 368 47.0
HPP92_021274 Vanilla planifolia HOM05D005903 ORTHO05D007293 2.6e-80 303.1 338 49.1
Rhsim13G0219000 Rhododendron simsii HOM05D005903 ORTHO05D007293 4.4e-80 302.4 332 51.2
CSS0034787 Camellia sinensis var. sinensis HOM05D005903 ORTHO05D007293 5.7e-80 302.0 318 53.8
AUR62036920 Chenopodium quinoa HOM05D005903 ORTHO05D007293 4.8e-79 298.9 336 49.4
Dinv01020 Davidia involucrata HOM05D005903 ORTHO05D007293 6.3e-79 298.5 330 50.9
Sabra01G0053000 Salix brachista HOM05D005903 ORTHO05D007293 2.4e-78 296.6 330 50.0
PSO675G2002 Papaver somniferum HOM05D005903 ORTHO05D007293 1.6e-77 293.9 332 49.1
VMungo0251G1440 Vigna mungo HOM05D005903 ORTHO05D007293 2.0e-77 293.5 325 51.1
Peaxi162Scf00036g02217 Petunia axillaris HOM05D005903 ORTHO05D007293 3.8e-76 289.3 296 51.0
Rhsim05G0003000 Rhododendron simsii HOM05D005903 ORTHO05D007293 8.5e-76 288.1 386 44.6
Sed0025041 Sechium edule HOM05D005903 ORTHO05D007293 1.1e-75 287.7 332 50.0
Duzib052G0373 Durio zibethinus HOM05D005903 ORTHO05D007293 3.6e-74 282.7 354 46.6
TWI63G1157 Tripterygium wilfordii HOM05D005903 ORTHO05D007293 2.3e-73 280.0 332 47.6
Hund09980 Selenicereus undatus HOM05D005903 ORTHO05D007293 3.0e-73 279.6 382 43.5
SEGI_28167 Sequoiadendron giganteum HOM05D005903 ORTHO05D007293 5.7e-72 275.4 334 46.1
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea HOM05D005903 ORTHO05D007293 7.5e-72 275.0 323 47.4
Lj1C1150G3 Lonicera japonica HOM05D005903 ORTHO05D007293 1.1e-70 271.2 299 50.5
SGA_v2.0_scaffold31G12765 Striga asiatica HOM05D005903 ORTHO05D007293 3.1e-70 269.6 334 45.8
Haze_05254 Corylus avellana HOM05D005903 ORTHO05D007293 3.5e-69 266.2 328 47.0
Rhsim07G0106900 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.0e-65 254.6 332 45.8
Psat7g087640 Pisum sativum HOM05D005903 ORTHO05D007293 3.7e-63 246.1 263 50.2
AUR62032162 Chenopodium quinoa HOM05D005903 ORTHO05D007293 6.3e-63 245.4 285 50.5
Sopen02g026460 Solanum pennellii HOM05D005903 ORTHO05D007293 1.6e-61 240.7 263 50.2
Prupe.4G118500 Prunus persica HOM05D005903 ORTHO05D007293 1.7e-60 237.3 255 51.8
Pp3c7_4190 Physcomitrium patens HOM05D005903 ORTHO05D007293 2.3e-60 236.9 339 38.9
Prupe.7G025500 Prunus persica HOM05D005903 ORTHO05D007293 1.6e-58 230.7 237 51.9
Os11g0549650 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 2.8e-58 229.9 232 51.7
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis HOM05D005903 ORTHO05D007293 8.0e-58 228.4 334 41.0
SMO367G0859 Selaginella moellendorffii HOM05D005903 ORTHO05D007293 1.4e-57 227.6 334 39.8
Mapoly0019s0171 Marchantia polymorpha HOM05D005903 ORTHO05D007293 3.0e-57 226.5 336 40.5
Zm00001eb201720 Zea mays HOM05D005903 ORTHO05D007293 6.8e-57 225.3 231 50.6
Phvul.002G188100 Phaseolus vulgaris HOM05D005903 ORTHO05D007293 2.6e-56 223.4 264 48.5
COL.COLO4_05791 Corchorus olitorius HOM05D005903 ORTHO05D007293 4.1e-54 216.1 189 58.2
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea HOM05D005903 ORTHO05D007293 1.2e-48 198.0 323 39.0
unitig_46.g18341 Utricularia gibba HOM05D005903 ORTHO05D007293 3.4e-48 196.4 332 39.2
Gohir.D11G050975 Gossypium hirsutum HOM05D005903 ORTHO05D007293 3.7e-47 193.0 172 57.0
Lalb_Chr07g0188231 Lupinus albus HOM05D005903 ORTHO05D007293 8.3e-47 191.8 189 56.1
Sc04g0004130 Simmondsia chinensis HOM05D005903 ORTHO05D007293 1.6e-37 161.0 166 51.8
Os11g0549690 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 6.0e-37 159.1 164 51.8
Oeu056062.1 Olea europaea HOM05D005903 ORTHO05D007293 3.9e-36 156.4 170 51.2
Haze_05249 Corylus avellana HOM05D005903 ORTHO05D007293 1.5e-32 144.4 205 45.4
Sc04g0004120 Simmondsia chinensis HOM05D005903 ORTHO05D007293 5.4e-30 136.0 94 64.9
Migut.O00470 Erythranthe guttata HOM05D005903 ORTHO05D007293 5.1e-28 129.4 149 50.3
MCO11G061 Micromonas commoda HOM05D005903 ORTHO05D007293 5.1e-28 129.4 345 29.3
Lalb_Chr07g0188221 Lupinus albus HOM05D005903 ORTHO05D007293 7.3e-27 125.6 143 46.2
Cfa024540 Carpinus fangiana HOM05D005903 ORTHO05D007293 4.7e-26 122.9 325 30.2
Cre10.g436900 Chlamydomonas reinhardtii HOM05D005903 ORTHO05D007293 4.7e-26 122.9 313 31.0
PRCOL_00001260 Prasinoderma coloniale HOM05D005903 ORTHO05D007293 2.1e-21 107.5 363 28.4
CARHR106840 Cardamine hirsuta HOM05D005903 ORTHO05D007293 4.6e-21 106.3 120 49.2
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 7.8e-21 105.5 170 35.9
Os05g0295700 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 4.3e-19 99.8 74 60.8
Glyma.08G193350 Glycine max HOM05D005903 ORTHO05D007293 1.1e-14 85.1 59 67.8
COL.COLO4_05792 Corchorus olitorius HOM05D005903 ORTHO05D007293 1.8e-12 77.8 67 56.7
SHI32710 Sapria himalayana HOM05D005903 ORTHO05D007293 8.7e-12 75.5 97 52.6
Oeu056063.2 Olea europaea HOM05D007234 ORTHO05D008488 6.9e-09 65.9 67 49.3
CAN.G508.15 Capsicum annuum HOM05D005903 ORTHO05D007293 2.9e-07 60.5 81 37.0
SHI32711 Sapria himalayana HOM05D005903 ORTHO05D007293 8.4e-07 58.9 43 58.1


User provided reference genes

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