Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 6.7e-127 457.2 210 100.0
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 1.2e-78 297.0 189 70.9
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 2.6e-78 295.8 192 66.7
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 3.4e-78 295.4 186 69.4
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 2.2e-77 292.7 195 66.7
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 3.2e-76 288.9 192 64.1
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 7.1e-76 287.7 191 66.5
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 2.7e-75 285.8 196 67.3
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 3.5e-75 285.4 189 66.7
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 7.8e-75 284.3 189 67.2
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 1.7e-74 283.1 193 65.3
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 3.0e-74 282.3 190 68.9
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 6.6e-74 281.2 193 64.8
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 8.6e-74 280.8 193 64.8
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 8.6e-74 280.8 188 65.4
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 8.6e-74 280.8 195 66.7
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 1.1e-73 280.4 188 66.5
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.5e-73 280.0 187 66.8
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 1.5e-73 280.0 195 66.2
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 1.9e-73 279.6 187 63.6
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.9e-73 279.6 194 65.5
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 4.3e-73 278.5 194 64.9
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 5.6e-73 278.1 199 63.8
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 5.6e-73 278.1 193 65.8
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 7.3e-73 277.7 191 64.4
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 9.5e-73 277.3 193 63.7
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 9.5e-73 277.3 193 63.7
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 9.5e-73 277.3 188 66.5
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 9.5e-73 277.3 190 67.4
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 1.2e-72 276.9 188 68.6
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 2.1e-72 276.2 203 63.5
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 2.1e-72 276.2 194 64.4
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 2.1e-72 276.2 187 64.7
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 2.1e-72 276.2 191 67.0
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 4.7e-72 275.0 194 63.4
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 6.2e-72 274.6 194 63.4
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 6.2e-72 274.6 195 64.6
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 1.1e-71 273.9 192 62.0
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 1.1e-71 273.9 197 67.0
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 1.1e-71 273.9 194 64.4
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 1.1e-71 273.9 193 63.7
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 1.4e-71 273.5 188 66.0
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 3.1e-71 272.3 200 62.0
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 5.2e-71 271.6 189 65.1
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 5.2e-71 271.6 193 63.2
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 5.2e-71 271.6 194 64.4
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 5.2e-71 271.6 192 64.1
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 6.8e-71 271.2 194 63.9
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 6.8e-71 271.2 201 62.7
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 8.9e-71 270.8 193 63.2
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 1.2e-70 270.4 188 65.4
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 1.5e-70 270.0 194 63.9
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.5e-70 270.0 194 63.4
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 2.0e-70 269.6 193 63.2
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 2.0e-70 269.6 195 61.5
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 2.6e-70 269.2 197 61.4
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 4.4e-70 268.5 198 62.1
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 4.4e-70 268.5 195 64.6
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 5.8e-70 268.1 187 64.2
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 7.5e-70 267.7 193 62.7
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 7.5e-70 267.7 181 64.1
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 1.3e-69 266.9 204 62.7
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 1.7e-69 266.5 199 61.3
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 2.2e-69 266.2 195 63.6
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 3.7e-69 265.4 196 61.7
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 3.7e-69 265.4 193 60.6
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 4.9e-69 265.0 206 63.1
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 6.4e-69 264.6 190 62.1
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 8.3e-69 264.2 196 61.2
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 1.1e-68 263.8 191 59.7
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 1.4e-68 263.5 197 60.9
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 2.4e-68 262.7 196 61.2
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 3.2e-68 262.3 191 61.3
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 3.2e-68 262.3 194 63.4
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 5.4e-68 261.5 196 63.8
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 5.4e-68 261.5 196 63.8
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 7.1e-68 261.2 200 59.0
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 7.1e-68 261.2 193 59.1
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 1.2e-67 260.4 189 61.4
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 1.6e-67 260.0 185 61.1
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.6e-67 260.0 189 61.4
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 3.5e-67 258.8 186 64.0
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 4.6e-67 258.5 196 59.2
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 6.0e-67 258.1 186 63.4
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 7.8e-67 257.7 187 63.1
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 1.7e-66 256.5 182 65.4
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 2.3e-66 256.1 194 61.3
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 2.3e-66 256.1 198 60.1
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 2.3e-66 256.1 193 60.6
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 3.0e-66 255.8 183 63.4
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 3.0e-66 255.8 191 59.7
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 3.0e-66 255.8 187 62.0
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 3.9e-66 255.4 183 63.4
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 8.6e-66 254.2 184 63.0
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 1.1e-65 253.8 183 63.4
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 1.5e-65 253.4 196 59.7
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 5.6e-65 251.5 182 62.1
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 7.3e-65 251.1 196 58.7
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 1.1e-63 247.3 185 62.2
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 1.1e-63 247.3 185 62.2
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 3.4e-62 242.3 194 58.2
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 4.2e-60 235.3 194 56.7
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.3e-58 230.3 191 52.9
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 9.6e-57 224.2 186 59.7
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 2.8e-56 222.6 196 54.1
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 1.3e-53 213.8 156 62.8
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.2e-53 213.0 156 60.3
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.2e-53 213.0 156 60.3
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 7.8e-51 204.5 187 54.0
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 1.3e-50 203.8 146 61.0
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 3.0e-50 202.6 173 54.9
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 4.8e-48 195.3 137 63.5
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 4.0e-47 192.2 204 46.6
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 2.6e-46 189.5 127 66.1
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 2.7e-35 152.9 75 77.3
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 9.6e-33 144.4 74 71.6
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.4e-12 77.4 163 33.7
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 2.0e-09 67.0 61 41.0


User provided reference genes

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