Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 5.4e-113 411.4 269 100.0
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 1.7e-21 107.5 103 69.9
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 8.3e-21 105.1 120 58.3
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 7.0e-20 102.1 82 73.2
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 7.8e-19 98.6 105 64.8
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 1.0e-18 98.2 111 60.4
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 3.0e-18 96.7 113 59.3
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 3.9e-18 96.3 103 60.2
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 5.0e-18 95.9 119 58.0
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 5.0e-18 95.9 95 63.2
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 1.5e-17 94.4 123 52.8
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 1.9e-17 94.0 93 63.4
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 1.9e-17 94.0 93 63.4
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 1.9e-17 94.0 116 53.4
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 2.5e-17 93.6 99 60.6
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 4.3e-17 92.8 116 59.5
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 4.3e-17 92.8 93 63.4
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 4.3e-17 92.8 93 61.3
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 7.3e-17 92.0 104 57.7
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 7.3e-17 92.0 114 56.1
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 7.3e-17 92.0 85 70.6
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 9.5e-17 91.7 118 55.9
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 1.2e-16 91.3 114 56.1
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 1.2e-16 91.3 87 62.1
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 1.6e-16 90.9 105 59.0
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 1.6e-16 90.9 97 61.9
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 2.1e-16 90.5 118 53.4
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 2.1e-16 90.5 89 61.8
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 2.1e-16 90.5 106 57.5
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 2.8e-16 90.1 94 60.6
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 2.8e-16 90.1 93 58.1
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 4.7e-16 89.4 102 56.9
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 4.7e-16 89.4 90 61.1
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 8.0e-16 88.6 88 62.5
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 8.0e-16 88.6 88 62.5
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 1.4e-15 87.8 106 53.8
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 1.4e-15 87.8 113 56.6
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.8e-15 87.4 78 66.7
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 1.8e-15 87.4 85 64.7
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 2.3e-15 87.0 86 62.8
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 2.3e-15 87.0 105 57.1
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 3.1e-15 86.7 94 58.5
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 3.1e-15 86.7 94 58.5
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 3.1e-15 86.7 150 48.7
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 5.2e-15 85.9 82 64.6
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 5.2e-15 85.9 114 53.5
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 5.2e-15 85.9 94 57.4
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 8.9e-15 85.1 83 61.4
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 8.9e-15 85.1 88 61.4
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 8.9e-15 85.1 88 61.4
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 8.9e-15 85.1 95 57.9
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 8.9e-15 85.1 132 50.0
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 8.9e-15 85.1 75 68.0
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 1.2e-14 84.7 109 56.9
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 1.2e-14 84.7 109 56.9
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 1.2e-14 84.7 109 56.9
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.2e-14 84.7 87 59.8
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.5e-14 84.3 94 56.4
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 1.5e-14 84.3 81 63.0
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 2.0e-14 84.0 124 50.8
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 2.6e-14 83.6 113 55.8
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 3.4e-14 83.2 109 56.0
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 4.4e-14 82.8 90 61.1
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 9.8e-14 81.6 100 59.0
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 1.3e-13 81.3 93 59.1
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 1.3e-13 81.3 89 58.4
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 2.2e-13 80.5 114 54.4
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 2.2e-13 80.5 91 56.0
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 2.2e-13 80.5 110 51.8
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 2.9e-13 80.1 98 56.1
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 2.9e-13 80.1 81 63.0
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 2.9e-13 80.1 81 63.0
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 2.9e-13 80.1 83 60.2
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 4.9e-13 79.3 109 53.2
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 4.9e-13 79.3 84 63.1
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 1.4e-12 77.8 138 47.1
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 1.4e-12 77.8 84 63.1
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 1.4e-12 77.8 107 56.1
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 1.9e-12 77.4 116 50.0
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 1.9e-12 77.4 106 52.8
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 2.4e-12 77.0 86 59.3
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 2.4e-12 77.0 80 57.5
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 3.2e-12 76.6 104 51.9
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 4.1e-12 76.3 85 56.5
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 5.4e-12 75.9 112 49.1
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 1.2e-11 74.7 84 58.3
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 1.2e-11 74.7 93 55.9
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 1.6e-11 74.3 265 34.3
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 6.0e-11 72.4 106 50.9
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 1.7e-10 70.9 87 50.6
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 1.7e-10 70.9 109 55.0
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 2.3e-10 70.5 254 39.4
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 3.9e-10 69.7 101 48.5
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 8.6e-10 68.6 88 59.1
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 1.1e-09 68.2 84 56.0
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 4.3e-09 66.2 138 42.0
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 4.3e-09 66.2 154 37.7
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 9.5e-09 65.1 63 63.5
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 2.8e-08 63.5 69 58.0
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 8.1e-08 62.0 95 48.4
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 6.8e-07 58.9 31 93.5
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 6.8e-07 58.9 33 87.9


User provided reference genes

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