Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1029 Ceratophyllum demersum HOM05D007435 ORTHO05D009338 4.3e-66 254.6 137 100.0
CDE08G0963 Ceratophyllum demersum HOM05D000584 ORTHO05D009338 2.2e-54 215.7 135 88.9
MBI13_g04786_MAGBIO Magnolia biondii HOM05D007435 ORTHO05D009338 1.5e-18 96.7 90 60.0
TAR369G0027 Trochodendron aralioides HOM05D007435 ORTHO05D009338 1.8e-16 89.7 93 55.9
Lsat_1_v5_gn_1_100400 Lactuca sativa HOM05D007435 ORTHO05D009338 2.4e-16 89.4 89 50.6
ATR0006G035 Amborella trichopoda HOM05D007435 ORTHO05D009338 3.1e-16 89.0 110 49.1
TAR065G0004 Trochodendron aralioides HOM05D007435 ORTHO05D009338 1.2e-15 87.0 134 42.5
Nn7g36439 Nelumbo nucifera HOM05D007435 ORTHO05D009338 2.7e-15 85.9 87 57.5
Dinv32059 Davidia involucrata HOM05D007435 ORTHO05D009338 5.9e-15 84.7 88 53.4
Ah.10g030920 Amaranthus hybridus HOM05D007435 ORTHO05D009338 7.7e-15 84.3 114 48.2
Actinidia21528 Actinidia chinensis HOM05D007435 ORTHO05D009338 1.0e-14 84.0 83 55.4
Manes.11G002100 Manihot esculenta HOM05D007435 ORTHO05D009338 2.2e-14 82.8 125 48.0
Prupe.2G027100 Prunus persica HOM05D007435 ORTHO05D009338 2.2e-14 82.8 83 54.2
RcHm_v2.0_Chr1g0319401 Rosa chinensis HOM05D007435 ORTHO05D009338 8.5e-14 80.9 132 46.2
Solyc01g068190.3 Solanum lycopersicum HOM05D007435 ORTHO05D009338 8.5e-14 80.9 103 50.5
Sopen01g030130 Solanum pennellii HOM05D007435 ORTHO05D009338 8.5e-14 80.9 103 50.5
Actinidia02252 Actinidia chinensis HOM05D007435 ORTHO05D009338 1.9e-13 79.7 89 59.6
FAN03G1772 Fragaria x ananassa HOM05D007435 ORTHO05D009338 1.9e-13 79.7 89 52.8
unitig_578.g16053 Utricularia gibba HOM05D007435 ORTHO05D009338 1.9e-13 79.7 133 46.6
PGSC0003DMG401006753 Solanum tuberosum HOM05D007435 ORTHO05D009338 2.5e-13 79.3 82 57.3
Rhsim05G0126700 Rhododendron simsii HOM05D007435 ORTHO05D009338 3.2e-13 79.0 108 44.4
Dinv03572 Davidia involucrata HOM05D007435 ORTHO05D009338 4.2e-13 78.6 87 49.4
Dinv05039 Davidia involucrata HOM05D007435 ORTHO05D009338 4.2e-13 78.6 87 49.4
PSO339G5565 Papaver somniferum HOM05D007435 ORTHO05D009338 4.2e-13 78.6 125 43.2
HanXRQChr01g0020861 Helianthus annuus HOM05D007435 ORTHO05D009338 5.5e-13 78.2 121 38.8
Cpa.g.sc197.17 Carica papaya HOM05D007435 ORTHO05D009338 9.4e-13 77.4 96 51.0
Peaxi162Scf00087g00129 Petunia axillaris HOM05D007435 ORTHO05D009338 9.4e-13 77.4 78 60.3
FvH4_7g02100 Fragaria vesca HOM05D007435 ORTHO05D009338 1.2e-12 77.0 134 42.5
Migut.N01821 Erythranthe guttata HOM05D007435 ORTHO05D009338 1.6e-12 76.6 83 50.6
TWI63G0886 Tripterygium wilfordii HOM05D007435 ORTHO05D009338 1.6e-12 76.6 140 42.1
ECA248G3437 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-12 76.3 88 47.7
CSS0019859 Camellia sinensis var. sinensis HOM05D007435 ORTHO05D009338 3.6e-12 75.5 84 50.0
SalBow6G1324 Salvia bowleyana HOM05D007435 ORTHO05D009338 3.6e-12 75.5 92 53.3
SGA_v2.0_scaffold354G49740 Striga asiatica HOM05D007435 ORTHO05D009338 4.7e-12 75.1 84 56.0
MELO3C005141.2 Cucumis melo HOM05D007435 ORTHO05D009338 6.1e-12 74.7 137 39.4
DCAR_009211 Daucus carota HOM05D007435 ORTHO05D009338 6.1e-12 74.7 87 52.9
MD07G1027000 Malus domestica HOM05D007435 ORTHO05D009338 8.0e-12 74.3 83 51.8
Thecc.10G004500 Theobroma cacao HOM05D007435 ORTHO05D009338 1.0e-11 73.9 152 38.8
AUR62037244 Chenopodium quinoa HOM05D007435 ORTHO05D009338 1.4e-11 73.6 86 51.2
COL.COLO4_19345 Corchorus olitorius HOM05D007435 ORTHO05D009338 1.8e-11 73.2 131 43.5
AUR62026808 Chenopodium quinoa HOM05D007435 ORTHO05D009338 2.3e-11 72.8 109 44.0
Eucgr.G03266 Eucalyptus grandis HOM05D007435 ORTHO05D009338 3.0e-11 72.4 77 54.5
Nitab4.5_0000316g0230 Nicotiana tabacum HOM05D002000 ORTHO05D002027 3.0e-11 72.4 78 56.4
Haze_03106 Corylus avellana HOM05D007435 ORTHO05D009338 5.2e-11 71.6 142 40.1
CsaV3_5G024570 Cucumis sativus L. HOM05D007435 ORTHO05D009338 8.8e-11 70.9 136 36.8
MD02G1297000 Malus domestica HOM05D007435 ORTHO05D009338 1.2e-10 70.5 83 50.6
Lj3g0014273 Lotus japonicus HOM05D007435 ORTHO05D009338 2.0e-10 69.7 121 41.3
ClCG01G007560 Citrullus lanatus HOM05D007435 ORTHO05D009338 2.6e-10 69.3 128 39.8
Duzib114G0226 Durio zibethinus HOM05D007435 ORTHO05D009338 2.6e-10 69.3 150 38.0
HPP92_025000 Vanilla planifolia HOM05D007435 ORTHO05D009338 2.6e-10 69.3 103 45.6
Duzib128G0703 Durio zibethinus HOM05D007435 ORTHO05D009338 4.4e-10 68.6 137 39.4
Nitab4.5_0001775g0080 Nicotiana tabacum HOM05D007435 ORTHO05D009338 4.4e-10 68.6 135 40.7
Aa31LG2G18760 Aethionema arabicum HOM05D007435 ORTHO05D009338 7.5e-10 67.8 86 54.7
CANSAT80G0490 Cannabis sativa HOM05D007435 ORTHO05D009338 9.8e-10 67.4 136 37.5
Thhalv10026511m.g Eutrema salsugineum HOM05D007435 ORTHO05D009338 6.3e-09 64.7 86 46.5
Gohir.D10G251200 Gossypium hirsutum HOM05D007435 ORTHO05D009338 6.3e-09 64.7 90 45.6
Gorai.011G291600 Gossypium raimondii HOM05D007435 ORTHO05D009338 6.3e-09 64.7 90 45.6
Carub.0007s0901 Capsella rubella HOM05D007435 ORTHO05D009338 8.3e-09 64.3 86 46.5
Cfa010840 Carpinus fangiana HOM05D007435 ORTHO05D009338 8.3e-09 64.3 141 38.3
AL343U10010 Arabidopsis lyrata HOM05D007435 ORTHO05D009338 1.1e-08 63.9 87 46.0
Potri.001G022500 Populus trichocarpa HOM05D007435 ORTHO05D009338 1.1e-08 63.9 149 37.6
Os01g0940600 Oryza sativa ssp. japonica HOM05D007435 ORTHO05D009338 1.8e-08 63.2 93 41.9
AT4G31560 Arabidopsis thaliana HOM05D007435 ORTHO05D009338 2.4e-08 62.8 87 44.8
C01p07440 Brassica napus HOM05D007435 ORTHO05D009338 2.4e-08 62.8 93 44.1
BolC1t00726H Brassica oleracea HOM05D007435 ORTHO05D009338 2.4e-08 62.8 93 44.1
CARHR239440 Cardamine hirsuta HOM05D007435 ORTHO05D009338 2.4e-08 62.8 86 47.7
Gohir.A10G239300 Gossypium hirsutum HOM05D007435 ORTHO05D009338 3.1e-08 62.4 92 44.6
A01p06670 Brassica napus HOM05D005366 ORTHO05D006323 4.1e-08 62.0 87 44.8
Sc10g0004150 Simmondsia chinensis HOM05D007435 ORTHO05D009338 4.1e-08 62.0 137 35.8
BraA01t00625Z Brassica rapa HOM05D005366 ORTHO05D006323 5.4e-08 61.6 86 45.3
C07p58750 Brassica napus HOM05D007435 ORTHO05D009338 7.0e-08 61.2 85 48.2
BolC7t46323H Brassica oleracea HOM05D007435 ORTHO05D009338 7.0e-08 61.2 85 48.2
THA.LOC104826709 Tarenaya hassleriana HOM05D007435 ORTHO05D009338 7.0e-08 61.2 93 41.9
BcaC09g51937 Brassica carinata HOM05D007435 ORTHO05D009338 9.1e-08 60.8 92 43.5
CiPaw.13G009600 Carya illinoinensis HOM05D007435 ORTHO05D009338 9.1e-08 60.8 153 35.9
Psat5g213320 Pisum sativum HOM05D007435 ORTHO05D009338 9.1e-08 60.8 116 36.2
QL04p012434 Quercus lobata HOM05D007435 ORTHO05D009338 1.2e-07 60.5 58 55.2
QL04p013057 Quercus lobata HOM05D007435 ORTHO05D009338 1.2e-07 60.5 60 55.0
Medtr3g023160 Medicago truncatula HOM05D007435 ORTHO05D009338 1.6e-07 60.1 91 40.7
Sed0015818 Sechium edule HOM05D007435 ORTHO05D009338 1.6e-07 60.1 136 33.8
vmacro19756 Vaccinium macrocarpon HOM05D007435 ORTHO05D009338 1.6e-07 60.1 86 47.7
arahy.Tifrunner.gnm1.ann1.4Y0UDN Arachis hypogaea HOM05D007435 ORTHO05D009338 2.0e-07 59.7 126 37.3
Sp7g29390 Schrenkiella parvula HOM05D007435 ORTHO05D009338 2.0e-07 59.7 86 44.2
BcaNung01514 Brassica carinata HOM05D007435 ORTHO05D009338 2.7e-07 59.3 85 45.9
BcaNung04129 Brassica carinata HOM05D007435 ORTHO05D009338 3.5e-07 58.9 86 46.5
Lalb_Chr25g0282731 Lupinus albus HOM05D007435 ORTHO05D009338 3.5e-07 58.9 109 41.3
PGR031G0502 Punica granatum HOM05D007435 ORTHO05D009338 3.5e-07 58.9 132 37.1
Sabra01G0016900 Salix brachista HOM05D007435 ORTHO05D009338 3.5e-07 58.9 85 44.7
Zm00001eb141550 Zea mays HOM05D007435 ORTHO05D009338 4.5e-07 58.5 111 42.3
A03p60860 Brassica napus HOM05D007435 ORTHO05D009338 7.7e-07 57.8 86 45.3
BraA03t15122Z Brassica rapa HOM05D007435 ORTHO05D009338 7.7e-07 57.8 86 45.3
Zm00001eb363190 Zea mays HOM05D007435 ORTHO05D009338 1.0e-06 57.4 101 38.6
Aqoxy1G00332 Aquilegia oxysepala HOM05D007435 ORTHO05D009338 1.7e-06 56.6 77 42.9
Hund13323 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.8e-06 55.5 104 40.4
Ciclev10032994m.g Citrus clementina HOM05D007435 ORTHO05D009338 6.6e-06 54.7 97 38.1
arahy.Tifrunner.gnm1.ann1.KRJM02 Arachis hypogaea HOM05D007435 ORTHO05D009338 8.6e-06 54.3 130 35.4


User provided reference genes

Program Settings