Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 4.6e-89 331.3 172 100.0
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 9.8e-76 287.0 182 85.7
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 7.6e-60 234.2 139 83.5
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 1.1e-58 230.3 139 81.3
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 1.1e-58 230.3 139 81.3
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.4e-58 229.9 139 81.3
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.9e-58 229.6 162 73.5
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 5.4e-58 228.0 139 78.4
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 7.1e-58 227.6 137 82.5
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 7.1e-58 227.6 137 82.5
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 9.3e-58 227.3 138 79.7
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 1.2e-57 226.9 158 72.8
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 1.6e-57 226.5 137 83.2
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 2.1e-57 226.1 137 80.3
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 2.1e-57 226.1 156 73.7
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.1e-57 226.1 137 81.8
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 2.1e-57 226.1 138 81.2
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 2.1e-57 226.1 138 81.2
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 2.1e-57 226.1 138 80.4
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 3.5e-57 225.3 137 80.3
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 4.6e-57 224.9 139 79.9
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 6.0e-57 224.6 137 81.8
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 7.8e-57 224.2 137 80.3
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 1.3e-56 223.4 139 77.7
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 1.7e-56 223.0 137 78.8
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.3e-56 222.6 137 78.8
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 2.3e-56 222.6 139 78.4
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.0e-56 222.2 137 78.8
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.9e-56 221.9 137 78.1
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 3.9e-56 221.9 137 78.1
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 3.9e-56 221.9 137 79.6
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 5.1e-56 221.5 137 78.8
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 5.1e-56 221.5 137 78.8
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 5.1e-56 221.5 137 78.8
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 6.6e-56 221.1 137 78.1
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 6.6e-56 221.1 137 78.8
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 8.7e-56 220.7 137 78.8
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 8.7e-56 220.7 137 80.3
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 8.7e-56 220.7 137 78.8
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 1.1e-55 220.3 137 80.3
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.1e-55 220.3 137 79.6
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.5e-55 219.9 137 77.4
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 1.5e-55 219.9 137 77.4
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.5e-55 219.9 137 78.1
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.5e-55 219.9 137 78.1
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 1.5e-55 219.9 137 78.1
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 1.9e-55 219.5 139 77.7
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 1.9e-55 219.5 137 80.3
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 1.9e-55 219.5 137 80.3
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 2.5e-55 219.2 138 76.1
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 2.5e-55 219.2 137 77.4
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 3.3e-55 218.8 137 78.8
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 4.3e-55 218.4 136 80.1
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 4.3e-55 218.4 137 78.8
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 4.3e-55 218.4 137 75.9
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 4.3e-55 218.4 137 77.4
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 5.6e-55 218.0 139 78.4
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 7.3e-55 217.6 137 78.1
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 7.3e-55 217.6 137 77.4
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 9.6e-55 217.2 137 75.9
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 9.6e-55 217.2 141 75.9
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.3e-54 216.9 137 76.6
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 1.3e-54 216.9 137 76.6
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 1.3e-54 216.9 137 75.2
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 1.6e-54 216.5 137 73.7
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 1.6e-54 216.5 137 73.7
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 1.6e-54 216.5 137 75.9
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 2.1e-54 216.1 137 75.2
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.1e-54 216.1 131 80.9
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 2.1e-54 216.1 137 78.1
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 2.8e-54 215.7 137 73.0
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 2.8e-54 215.7 137 73.0
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 2.8e-54 215.7 137 74.5
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 2.8e-54 215.7 133 78.2
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 3.6e-54 215.3 140 77.9
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 3.6e-54 215.3 137 73.7
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 3.6e-54 215.3 131 80.9
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 4.8e-54 214.9 137 73.7
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 4.8e-54 214.9 137 76.6
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 4.8e-54 214.9 137 78.1
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 4.8e-54 214.9 137 74.5
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 6.2e-54 214.5 137 72.3
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 6.2e-54 214.5 137 72.3
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 6.2e-54 214.5 137 78.1
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 6.2e-54 214.5 137 75.2
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 8.1e-54 214.2 137 75.9
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.1e-53 213.8 137 74.5
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 1.1e-53 213.8 137 76.6
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 1.1e-53 213.8 137 75.2
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 2.4e-53 212.6 136 77.2
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 4.0e-53 211.8 137 71.5
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 4.0e-53 211.8 137 71.5
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 4.0e-53 211.8 136 75.0
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 4.0e-53 211.8 136 75.0
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 4.0e-53 211.8 136 75.0
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 6.9e-53 211.1 137 75.9
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 1.5e-52 209.9 137 76.6
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 2.0e-52 209.5 137 75.2
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 3.4e-52 208.8 139 73.4
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 5.8e-52 208.0 136 75.0
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 7.6e-52 207.6 136 74.3
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 1.7e-51 206.5 140 71.4
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 6.4e-51 204.5 134 73.9
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 1.4e-50 203.4 139 71.2
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 1.9e-50 203.0 139 71.9
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 1.9e-50 203.0 139 71.9
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 1.6e-49 199.9 140 72.1
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 6.7e-48 194.5 115 85.2
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 1.9e-47 193.0 137 68.6
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 1.8e-45 186.4 139 66.2
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 2.9e-43 179.1 114 78.1
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 4.2e-42 175.3 103 84.5
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 2.7e-41 172.6 103 81.6
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 7.9e-41 171.0 137 64.2
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 8.7e-40 167.5 103 79.6
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 1.9e-39 166.4 136 60.3
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 2.8e-38 162.5 141 58.9
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 6.9e-37 157.9 114 65.8
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 4.5e-36 155.2 151 51.0
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 4.5e-36 155.2 104 73.1
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 5.8e-36 154.8 91 82.4
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 9.3e-34 147.5 91 78.0
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 5.7e-31 138.3 112 61.6
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 4.6e-25 118.6 74 74.3
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 6.3e-22 108.2 106 49.1
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.3e-16 89.7 106 50.9


User provided reference genes

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