Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0998 Ceratophyllum demersum HOM05D006409 ORTHO05D008250 3.4e-242 841.3 438 100.0
TAR629G2567 Trochodendron aralioides HOM05D006409 ORTHO05D008250 5.2e-73 279.3 376 45.5
PSO302G0195 Papaver somniferum HOM05D006409 ORTHO05D008250 3.3e-67 260.0 384 42.7
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 7.3e-67 258.8 425 41.4
PSO478G4763 Papaver somniferum HOM05D006409 ORTHO05D008250 2.1e-61 240.7 384 40.9
PSO017G5610 Papaver somniferum HOM05D006409 ORTHO05D008250 3.0e-60 236.9 382 40.3
Oeu014392.1 Olea europaea HOM05D006409 ORTHO05D006262 1.6e-58 231.1 364 41.8
ATR0064G033 Amborella trichopoda HOM05D006409 ORTHO05D008250 1.1e-57 228.4 454 37.9
Nn4g23374 Nelumbo nucifera HOM05D006409 ORTHO05D008250 1.8e-57 227.6 399 39.1
Sabra15G0078400 Salix brachista HOM05D006409 ORTHO05D008250 3.1e-57 226.9 324 44.1
Ciclev10020474m.g Citrus clementina HOM05D006409 ORTHO05D008250 6.9e-57 225.7 352 42.6
Thecc.03G097200 Theobroma cacao HOM05D006409 ORTHO05D008250 2.6e-56 223.8 332 45.8
Lj4g0024886 Lotus japonicus HOM05D006409 ORTHO05D008250 3.8e-55 219.9 323 43.7
CiPaw.11G050000 Carya illinoinensis HOM05D006409 ORTHO05D008250 1.1e-54 218.4 354 41.8
QL10p018676 Quercus lobata HOM05D006409 ORTHO05D008250 3.2e-54 216.9 357 42.6
Duzib084G0027 Durio zibethinus HOM05D006409 ORTHO05D008250 5.4e-54 216.1 360 39.7
Carub.0008s2186 Capsella rubella HOM05D006409 ORTHO05D008250 3.5e-53 213.4 338 39.9
Actinidia09250 Actinidia chinensis HOM05D006409 ORTHO05D008250 4.6e-53 213.0 367 40.3
Potri.015G048900 Populus trichocarpa HOM05D006409 ORTHO05D008250 7.9e-53 212.2 350 41.4
Cpa.g.sc94.9 Carica papaya HOM05D006409 ORTHO05D008250 1.3e-52 211.5 338 42.0
Manes.14G084000 Manihot esculenta HOM05D006409 ORTHO05D008250 1.7e-52 211.1 352 38.9
Nitab4.5_0001961g0070 Nicotiana tabacum HOM05D006409 ORTHO05D008250 2.3e-52 210.7 337 41.5
MD14G1208800 Malus domestica HOM05D006409 ORTHO05D008250 3.0e-52 210.3 353 41.1
MSTRG.22971 Avicennia marina HOM05D006409 ORTHO05D008250 6.6e-52 209.1 339 42.2
Os07g0598700 Oryza sativa ssp. japonica HOM05D006409 ORTHO05D008250 8.7e-52 208.8 389 37.3
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 1.1e-51 208.4 343 41.7
Glyma.05G022800 Glycine max HOM05D006409 ORTHO05D008250 1.5e-51 208.0 344 40.4
PGR083G0341 Punica granatum HOM05D006409 ORTHO05D008250 3.3e-51 206.8 345 41.2
Glyma.17G076800 Glycine max HOM05D006409 ORTHO05D008250 1.6e-50 204.5 336 41.7
Sp6g35060 Schrenkiella parvula HOM05D006409 ORTHO05D008250 2.8e-50 203.8 340 43.5
Nitab4.5_0005160g0050 Nicotiana tabacum HOM05D006409 ORTHO05D008250 1.4e-49 201.4 337 42.1
PGSC0003DMG400012806 Solanum tuberosum HOM05D006409 ORTHO05D008250 1.2e-48 198.4 358 38.0
Zm00001eb108440 Zea mays HOM05D006409 ORTHO05D008250 1.5e-48 198.0 386 35.8
Rhsim08G0148500 Rhododendron simsii HOM05D006409 ORTHO05D008250 2.6e-48 197.2 334 40.4
Medtr4g109330 Medicago truncatula HOM05D006409 ORTHO05D008250 4.5e-48 196.4 323 40.6
VMungo1215G3198 Vigna mungo HOM05D006409 ORTHO05D008250 4.5e-48 196.4 336 42.0
C03p03950 Brassica napus HOM05D006409 ORTHO05D008250 7.6e-48 195.7 340 40.3
BolC3t12932H Brassica oleracea HOM05D006409 ORTHO05D008250 7.6e-48 195.7 340 40.3
Prupe.5G201100 Prunus persica HOM05D006409 ORTHO05D008250 7.6e-48 195.7 363 39.1
DCAR_026015 Daucus carota HOM05D006409 ORTHO05D008250 9.9e-48 195.3 328 39.9
Phvul.L001604 Phaseolus vulgaris HOM05D006409 ORTHO05D008250 1.3e-47 194.9 346 39.9
AT5G07890 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 6.4e-47 192.6 337 41.2
Haze_07680 Corylus avellana HOM05D006409 ORTHO05D008250 6.4e-47 192.6 318 40.9
Carub.0006s0678 Capsella rubella HOM05D006409 ORTHO05D008250 8.4e-47 192.2 337 39.8
AL6G18220 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 1.4e-46 191.4 337 40.1
CARHR205310 Cardamine hirsuta HOM05D006409 ORTHO05D008250 2.4e-46 190.7 335 38.5
Sopen12g016610 Solanum pennellii HOM05D006409 ORTHO05D008250 5.4e-46 189.5 337 38.9
Cfa019299 Carpinus fangiana HOM05D006409 ORTHO05D008250 7.1e-46 189.1 353 39.1
CAN.G172.10 Capsicum annuum HOM05D006409 ORTHO05D008250 1.2e-45 188.3 337 39.5
BcaC06g32511 Brassica carinata HOM05D001913 ORTHO05D008250 3.5e-45 186.8 381 36.7
BcaB01g05645 Brassica carinata HOM05D006409 ORTHO05D008250 6.0e-45 186.0 336 39.6
BolC9t59643H Brassica oleracea HOM05D006409 ORTHO05D008250 1.0e-44 185.3 340 39.1
GSVIVG01007923001 Vitis vinifera HOM05D006409 ORTHO05D008250 2.3e-44 184.1 325 38.8
AL8G37860 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 3.9e-44 183.3 337 37.4
C09p68980 Brassica napus HOM05D006409 ORTHO05D006405 5.1e-44 183.0 339 38.3
Solyc12g036300.3 Solanum lycopersicum HOM05D006409 ORTHO05D008250 5.1e-44 183.0 337 38.9
Psat4g048440 Pisum sativum HOM05D006409 ORTHO05D008250 1.5e-43 181.4 316 38.6
vmacro17591 Vaccinium macrocarpon HOM05D006409 ORTHO05D008250 1.9e-43 181.0 389 36.2
CANSAT80G1113 Cannabis sativa HOM05D006409 ORTHO05D008250 3.3e-43 180.3 351 37.0
BraA10t44915Z Brassica rapa HOM05D001913 ORTHO05D006405 1.6e-42 177.9 329 39.2
arahy.Tifrunner.gnm1.ann1.PS4SMH Arachis hypogaea HOM05D006409 ORTHO05D008250 3.7e-42 176.8 395 36.7
arahy.Tifrunner.gnm1.ann1.4D2E4C Arachis hypogaea HOM05D006409 ORTHO05D008250 4.8e-42 176.4 359 38.7
THA.LOC104818336 Tarenaya hassleriana HOM05D006409 ORTHO05D008250 4.8e-42 176.4 338 38.2
A10p28660 Brassica napus HOM05D006409 ORTHO05D008250 6.2e-42 176.0 337 38.3
COL.COLO4_22753 Corchorus olitorius HOM05D006409 ORTHO05D008250 2.4e-41 174.1 320 36.9
Atru.chr9.377 Acer truncatum HOM05D006409 ORTHO05D008250 3.1e-41 173.7 317 37.9
SalBow5G3762 Salvia bowleyana HOM05D006409 ORTHO05D008250 3.1e-41 173.7 294 40.8
FvH4_5g14277 Fragaria vesca HOM05D006409 ORTHO05D008250 6.9e-41 172.6 337 38.3
FAN18G2755 Fragaria x ananassa HOM05D006409 ORTHO05D008250 9.0e-41 172.2 343 37.0
TPR.G2042 Trifolium pratense HOM05D006409 ORTHO05D008250 1.2e-40 171.8 332 37.3
Eucgr.B00571 Eucalyptus grandis HOM05D006409 ORTHO05D008250 1.5e-40 171.4 341 37.8
Cc00_g02320 Coffea canephora HOM05D006409 ORTHO05D008250 2.0e-40 171.0 340 35.0
FAN13G1588 Fragaria x ananassa HOM05D006409 ORTHO05D008250 2.0e-40 171.0 333 37.8
Thhalv10013673m.g Eutrema salsugineum HOM05D006409 ORTHO05D008250 2.6e-40 170.6 337 37.7
Gohir.D12G183500 Gossypium hirsutum HOM05D006409 ORTHO05D008250 5.8e-40 169.5 357 35.3
A03p03510 Brassica napus HOM05D006409 ORTHO05D008250 3.8e-39 166.8 337 37.1
BraA03t09701Z Brassica rapa HOM05D006409 ORTHO05D008250 3.8e-39 166.8 337 37.1
TWI81G1094 Tripterygium wilfordii HOM05D006409 ORTHO05D008250 3.8e-39 166.8 340 37.4
Lalb_Chr13g0302951 Lupinus albus HOM05D006409 ORTHO05D008250 6.5e-39 166.0 330 37.9
BcaNung06903 Brassica carinata HOM05D006409 ORTHO05D008250 8.4e-39 165.6 337 36.2
Migut.I00315 Erythranthe guttata HOM05D006409 ORTHO05D008250 2.1e-37 161.0 337 36.2
Gorai.008G196800 Gossypium raimondii HOM05D006409 ORTHO05D008250 1.0e-36 158.7 340 35.3
Peaxi162Scf00106g00081 Petunia axillaris HOM05D006409 ORTHO05D008250 8.7e-36 155.6 348 33.6
RcHm_v2.0_Chr7g0182601 Rosa chinensis HOM05D006409 ORTHO05D008250 1.9e-35 154.5 342 34.5
AT5G61200 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 2.5e-35 154.1 326 34.0
HanXRQChr09g0270151 Helianthus annuus HOM05D006409 ORTHO05D008250 3.3e-35 153.7 337 32.9
CANSAT80G0413 Cannabis sativa HOM05D006409 ORTHO05D008250 5.7e-35 152.9 347 34.6
MELO3C002015.2 Cucumis melo HOM05D006409 ORTHO05D008250 1.3e-34 151.8 345 33.6
Ah.02g113920 Amaranthus hybridus HOM05D006409 ORTHO05D008250 1.6e-34 151.4 322 34.8
Gohir.A12G180800 Gossypium hirsutum HOM05D006409 ORTHO05D008250 3.7e-34 150.2 357 33.6
Sc04g0003080 Simmondsia chinensis HOM05D006409 ORTHO05D008250 3.7e-34 150.2 327 32.7
AUR62021594 Chenopodium quinoa HOM05D006409 ORTHO05D008250 6.3e-34 149.4 345 35.1
CsaV3_1G005860 Cucumis sativus L. HOM05D006409 ORTHO05D008250 2.4e-33 147.5 346 32.7
C04p51620 Brassica napus HOM05D006409 ORTHO05D008250 4.1e-33 146.7 272 39.0
FAN08G0388 Fragaria x ananassa HOM05D006409 ORTHO05D008250 4.1e-33 146.7 307 37.8
Lj5A105T60 Lonicera japonica HOM05D006409 ORTHO05D008250 2.6e-32 144.1 291 36.8
ClCG04G011930 Citrullus lanatus HOM05D006409 ORTHO05D008250 5.8e-32 142.9 344 32.3
AUR62008498 Chenopodium quinoa HOM05D006409 ORTHO05D008250 2.7e-29 134.0 353 32.9
ECA232G2526 Erigeron canadensis HOM05D006409 ORTHO05D008250 3.5e-29 133.7 320 31.6
BcaC02g08700 Brassica carinata HOM05D006409 ORTHO05D008250 1.3e-28 131.7 270 35.9
Actinidia04843 Actinidia chinensis HOM05D006409 ORTHO05D008250 5.1e-28 129.8 216 40.3
Ca_21789_v3 Cicer arietinum L. HOM05D006409 ORTHO05D008250 2.5e-27 127.5 284 35.6
Hund02605 Selenicereus undatus HOM05D006409 ORTHO05D008250 2.8e-26 124.0 332 32.8
Sed0008489 Sechium edule HOM05D006409 ORTHO05D008250 1.7e-23 114.8 294 31.3
HanXRQChr16g0502261 Helianthus annuus HOM05D006409 ORTHO05D008250 5.5e-22 109.8 336 28.0
EL10Ac5g11100 Beta vulgaris HOM05D006409 ORTHO05D008250 1.2e-21 108.6 320 29.1
BcaC02g08698 Brassica carinata HOM05D006409 ORTHO05D008250 6.1e-21 106.3 273 33.7
SEGI_28191 Sequoiadendron giganteum HOM05D006409 ORTHO05D008250 2.3e-20 104.4 433 25.2
SEGI_37085 Sequoiadendron giganteum HOM05D006409 ORTHO05D008250 2.3e-20 104.4 433 25.2
Lsat_1_v5_gn_4_110201 Lactuca sativa HOM05D006409 ORTHO05D008250 3.3e-19 100.5 288 28.5
Actinidia12838 Actinidia chinensis HOM05D006409 ORTHO05D008250 6.9e-17 92.8 90 56.7
arahy.Tifrunner.gnm1.ann1.LPT8KM Arachis hypogaea HOM05D006409 ORTHO05D008250 2.2e-15 87.8 73 61.6
Duzib068G0538 Durio zibethinus HOM05D006409 ORTHO05D008250 9.4e-14 82.4 164 35.4
C04p51600 Brassica napus HOM05D006409 ORTHO05D008250 2.1e-13 81.3 83 56.6
SGA_v2.0_scaffold25G10967 Striga asiatica HOM05D006409 ORTHO05D008250 1.1e-11 75.5 273 28.6
BcaC02g08699 Brassica carinata HOM05D006409 ORTHO05D008250 3.3e-11 73.9 208 30.8
C04p51590 Brassica napus HOM05D006409 ORTHO05D008250 2.0e-08 64.7 82 43.9


User provided reference genes

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