Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0976 Ceratophyllum demersum HOM05D000613 ORTHO05D000446 7.4e-138 493.8 240 100.0
CDE06G2416 Ceratophyllum demersum HOM05D000613 ORTHO05D000446 7.9e-39 164.9 230 48.3
TAR622G1106 Trochodendron aralioides HOM05D000613 ORTHO05D000446 6.9e-11 72.0 78 46.2
PSO063G5793 Papaver somniferum HOM05D000613 ORTHO05D000446 1.5e-10 70.9 96 38.5
PSO421G0542 Papaver somniferum HOM05D000613 ORTHO05D000446 2.0e-10 70.5 84 40.5
TAR629G1368 Trochodendron aralioides HOM05D000613 ORTHO05D000446 2.0e-10 70.5 64 48.4
Lj3P1014T35 Lonicera japonica HOM05D000613 ORTHO05D000446 1.0e-09 68.2 65 46.2
Aqoxy3G00279 Aquilegia oxysepala HOM05D000613 ORTHO05D000446 1.3e-09 67.8 71 46.5
Nn4g23864 Nelumbo nucifera HOM05D000613 ORTHO05D000446 1.3e-09 67.8 78 39.7
DCAR_023653 Daucus carota HOM05D000613 ORTHO05D000446 2.9e-09 66.6 78 41.0
Nn3g17863 Nelumbo nucifera HOM05D000613 ORTHO05D000446 2.9e-09 66.6 78 42.3
TAR374G1435 Trochodendron aralioides HOM05D000613 ORTHO05D000446 3.8e-09 66.2 59 47.5
VMungo0720G2349 Vigna mungo HOM05D000613 ORTHO05D000446 3.8e-09 66.2 93 35.5
Dinv31632 Davidia involucrata HOM05D000613 ORTHO05D000446 5.0e-09 65.9 88 37.5
GSVIVG01011886001 Vitis vinifera HOM05D000613 ORTHO05D000446 6.5e-09 65.5 78 44.9
Cc11_g10030 Coffea canephora HOM05D000613 ORTHO05D000446 8.5e-09 65.1 87 42.5
RcHm_v2.0_Chr5g0029421 Rosa chinensis HOM05D000613 ORTHO05D000446 1.1e-08 64.7 131 32.8
Sc04g0006320 Simmondsia chinensis HOM05D000613 ORTHO05D000446 1.1e-08 64.7 85 40.0
CAN.G610.74 Capsicum annuum HOM05D000613 ORTHO05D000446 1.9e-08 63.9 85 40.0
Phvul.007G028100 Phaseolus vulgaris HOM05D000613 ORTHO05D000446 2.5e-08 63.5 93 33.3
CSS0006991 Camellia sinensis var. sinensis HOM05D000613 ORTHO05D000446 4.2e-08 62.8 95 41.1
DCAR_026736 Daucus carota HOM05D000613 ORTHO05D000446 7.2e-08 62.0 74 40.5
HanXRQChr16g0529411 Helianthus annuus HOM05D000613 ORTHO05D000446 7.2e-08 62.0 82 40.2
QL01p041319 Quercus lobata HOM05D000613 ORTHO05D000446 9.4e-08 61.6 73 39.7
MBI16_g32673_MAGBIO Magnolia biondii HOM05D000613 ORTHO05D000446 1.2e-07 61.2 80 38.8
Nitab4.5_0005746g0020 Nicotiana tabacum HOM05D000613 ORTHO05D000446 1.6e-07 60.8 86 38.4
Lsat_1_v5_gn_4_15981 Lactuca sativa HOM05D000613 ORTHO05D000446 2.1e-07 60.5 82 39.0
Nitab4.5_0003715g0090 Nicotiana tabacum HOM05D000613 ORTHO05D000446 2.7e-07 60.1 87 37.9
Ah.03g137550 Amaranthus hybridus HOM05D000613 ORTHO05D000446 3.6e-07 59.7 89 36.0
Dinv21075 Davidia involucrata HOM05D000613 ORTHO05D000446 3.6e-07 59.7 102 36.3
Glyma.10G273500 Glycine max HOM05D000613 ORTHO05D000446 3.6e-07 59.7 91 34.1
Ciclev10015747m.g Citrus clementina HOM05D000613 ORTHO05D000446 4.7e-07 59.3 93 36.6
MBI09_g18089_MAGBIO Magnolia biondii HOM05D000613 ORTHO05D000446 4.7e-07 59.3 63 42.9
Prupe.1G312400 Prunus persica HOM05D000613 ORTHO05D000446 4.7e-07 59.3 123 30.9
SHI26280 Sapria himalayana HOM05D000613 ORTHO05D000446 4.7e-07 59.3 91 34.1
HanXRQChr12g0380671 Helianthus annuus HOM05D000613 ORTHO05D000446 6.1e-07 58.9 86 33.7
PSO407G0415 Papaver somniferum HOM05D000613 ORTHO05D000446 6.1e-07 58.9 86 45.3
CSS0040585 Camellia sinensis var. sinensis HOM05D000613 ORTHO05D000446 8.0e-07 58.5 91 36.3
HanXRQChr17g0567541 Helianthus annuus HOM05D000613 ORTHO05D000446 8.0e-07 58.5 95 36.8
AUR62035204 Chenopodium quinoa HOM05D000613 ORTHO05D000446 1.0e-06 58.2 84 36.9
FAN21G2708 Fragaria x ananassa HOM05D000613 ORTHO05D000446 1.0e-06 58.2 85 37.6
BcaC09g48875 Brassica carinata HOM05D000613 ORTHO05D000446 1.4e-06 57.8 75 38.7
A01p35370 Brassica napus HOM05D000613 ORTHO05D000446 1.4e-06 57.8 75 38.7
C01p44880 Brassica napus HOM05D000613 ORTHO05D000446 1.4e-06 57.8 75 38.7
BolC1t04456H Brassica oleracea HOM05D000613 ORTHO05D000446 1.4e-06 57.8 75 38.7
BraA01t03618Z Brassica rapa HOM05D000613 ORTHO05D000446 1.4e-06 57.8 75 38.7
Eucgr.C02680 Eucalyptus grandis HOM05D000613 ORTHO05D000446 1.4e-06 57.8 74 39.2
FAN17G1938 Fragaria x ananassa HOM05D000613 ORTHO05D000446 1.4e-06 57.8 91 37.4
FAN17G2434 Fragaria x ananassa HOM05D000613 ORTHO05D000446 1.4e-06 57.8 91 37.4
FAN17G2947 Fragaria x ananassa HOM05D000613 ORTHO05D000446 1.4e-06 57.8 91 37.4
FAN22G0901 Fragaria x ananassa HOM05D000613 ORTHO05D000446 1.4e-06 57.8 91 37.4
Nitab4.5_0005123g0030 Nicotiana tabacum HOM05D000613 ORTHO05D000446 1.4e-06 57.8 76 39.5
Eucgr.C02690 Eucalyptus grandis HOM05D000613 ORTHO05D000446 1.8e-06 57.4 89 37.1
FAN07G1840 Fragaria x ananassa HOM05D000613 ORTHO05D000446 1.8e-06 57.4 91 37.4
Manes.14G103300 Manihot esculenta HOM05D000613 ORTHO05D000446 1.8e-06 57.4 96 34.4
Peaxi162Scf00753g00063 Petunia axillaris HOM05D000613 ORTHO05D000446 1.8e-06 57.4 72 43.1
TWI79G0254 Tripterygium wilfordii HOM05D000613 ORTHO05D000446 1.8e-06 57.4 96 30.2
Aa31LG8G5940 Aethionema arabicum HOM05D000613 ORTHO05D000446 2.3e-06 57.0 82 37.8
Aa31LG8G5950 Aethionema arabicum HOM05D000613 ORTHO05D000446 2.3e-06 57.0 82 37.8
Os07g0211700 Oryza sativa ssp. japonica HOM05D000613 ORTHO05D000446 2.3e-06 57.0 105 34.3
PSO443G0071 Papaver somniferum HOM05D000613 ORTHO05D000446 2.3e-06 57.0 69 39.1
ATR0626G191 Amborella trichopoda HOM05D000613 ORTHO05D000446 3.0e-06 56.6 92 37.0
EL10Ac6g14387 Beta vulgaris HOM05D000613 ORTHO05D000446 3.0e-06 56.6 57 43.9
PSO170G4018 Papaver somniferum HOM05D000613 ORTHO05D000446 3.0e-06 56.6 90 43.3
Psat6g226640 Pisum sativum HOM05D000613 ORTHO05D000446 3.0e-06 56.6 81 39.5
Actinidia16660 Actinidia chinensis HOM05D000613 ORTHO05D000446 3.9e-06 56.2 102 33.3
BcaB04g20719 Brassica carinata HOM05D000613 ORTHO05D000446 3.9e-06 56.2 72 40.3
ClCG05G022650 Citrullus lanatus HOM05D000613 ORTHO05D000446 3.9e-06 56.2 175 24.6
FvH4_4g27230 Fragaria vesca HOM05D000613 ORTHO05D000446 3.9e-06 56.2 91 37.4
FAN12G1416 Fragaria x ananassa HOM05D000613 ORTHO05D000446 3.9e-06 56.2 91 37.4
FAN12G1927 Fragaria x ananassa HOM05D000613 ORTHO05D000446 3.9e-06 56.2 91 37.4
Lalb_Chr02g0145901 Lupinus albus HOM05D000613 ORTHO05D000446 3.9e-06 56.2 88 37.5
SalBow8G0155 Salvia bowleyana HOM05D000613 ORTHO05D000446 3.9e-06 56.2 63 42.9
Sc08g0000320 Simmondsia chinensis HOM05D000613 ORTHO05D000446 3.9e-06 56.2 82 35.4
CAN.G609.10 Capsicum annuum HOM05D000613 ORTHO05D000446 5.2e-06 55.8 93 38.7
CARHR061240 Cardamine hirsuta HOM05D000613 ORTHO05D000446 5.2e-06 55.8 94 31.9
MELO3C012255.2 Cucumis melo HOM05D000613 ORTHO05D000446 5.2e-06 55.8 163 25.2
CsaV3_5G034390 Cucumis sativus L. HOM05D000613 ORTHO05D000446 5.2e-06 55.8 163 25.8
Duzib268G0906 Durio zibethinus HOM05D000613 ORTHO05D000446 5.2e-06 55.8 89 32.6
FvH4_3g17710 Fragaria vesca HOM05D000613 ORTHO05D000446 5.2e-06 55.8 85 36.5
FAN16G2002 Fragaria x ananassa HOM05D000613 ORTHO05D000446 5.2e-06 55.8 85 36.5
FAN25G2970 Fragaria x ananassa HOM05D000613 ORTHO05D000446 5.2e-06 55.8 85 36.5
Lsat_1_v5_gn_3_58960 Lactuca sativa HOM05D000613 ORTHO05D000446 5.2e-06 55.8 81 39.5
Lalb_Chr04g0254701 Lupinus albus HOM05D000613 ORTHO05D000446 5.2e-06 55.8 84 36.9
Medtr1g110590 Medicago truncatula HOM05D000613 ORTHO05D000446 5.2e-06 55.8 98 34.7
DCAR_030162 Daucus carota HOM05D000613 ORTHO05D000446 6.7e-06 55.5 75 36.0
Lj6A756T66 Lonicera japonica HOM05D000613 ORTHO05D000446 6.7e-06 55.5 75 38.7
MD13G1040600 Malus domestica HOM05D000613 ORTHO05D000446 6.7e-06 55.5 97 35.1
Sabra08G0092300 Salix brachista HOM05D000613 ORTHO05D000446 6.7e-06 55.5 106 32.1
PGSC0003DMG400000957 Solanum tuberosum HOM05D000613 ORTHO05D000446 6.7e-06 55.5 93 39.8
AL2G27320 Arabidopsis lyrata HOM05D000613 ORTHO05D000446 8.8e-06 55.1 67 37.3
CiPaw.15G086300 Carya illinoinensis HOM05D000613 ORTHO05D000446 8.8e-06 55.1 93 34.4
Eucgr.C02687 Eucalyptus grandis HOM05D000613 ORTHO05D000446 8.8e-06 55.1 75 38.7
Glyma.20G116500 Glycine max HOM05D000613 ORTHO05D000446 8.8e-06 55.1 61 37.7
Manes.06G067100 Manihot esculenta HOM05D000613 ORTHO05D000446 8.8e-06 55.1 96 33.3


User provided reference genes

Program Settings