Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 6.5e-157 557.4 288 100.0
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 5.4e-111 404.8 279 70.3
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 1.2e-110 403.7 288 68.8
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 3.5e-110 402.1 287 69.3
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 7.8e-110 401.0 279 72.4
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 7.8e-110 401.0 279 71.7
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 1.7e-109 399.8 279 71.0
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 2.3e-109 399.4 288 69.1
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 3.9e-109 398.7 288 69.8
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 3.9e-109 398.7 282 70.2
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 8.7e-109 397.5 279 72.0
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 1.1e-108 397.1 289 68.9
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 3.3e-108 395.6 288 69.1
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 3.3e-108 395.6 279 70.6
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 4.3e-108 395.2 288 68.1
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 5.6e-108 394.8 288 67.0
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 5.6e-108 394.8 247 79.4
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 5.6e-108 394.8 278 71.2
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 9.6e-108 394.0 288 68.1
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 9.6e-108 394.0 288 68.1
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 1.3e-107 393.7 288 67.4
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 2.1e-107 392.9 279 69.5
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 3.6e-107 392.1 279 70.6
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 6.2e-107 391.3 283 67.5
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 8.1e-107 391.0 288 67.4
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 8.1e-107 391.0 282 68.4
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 1.1e-106 390.6 288 69.1
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 1.4e-106 390.2 283 67.8
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 1.4e-106 390.2 278 68.7
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 1.8e-106 389.8 288 66.7
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 1.8e-106 389.8 279 68.1
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 5.3e-106 388.3 288 67.7
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 5.3e-106 388.3 288 68.1
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 6.9e-106 387.9 279 68.8
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 6.9e-106 387.9 288 68.8
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 1.2e-105 387.1 288 68.1
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 1.2e-105 387.1 288 66.7
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 1.5e-105 386.7 279 69.2
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 2.6e-105 386.0 288 67.4
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 4.4e-105 385.2 288 67.0
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 9.9e-105 384.0 283 67.5
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 1.3e-104 383.6 283 66.1
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 1.3e-104 383.6 283 66.1
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 1.3e-104 383.6 283 66.1
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 1.7e-104 383.3 282 66.0
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 2.2e-104 382.9 283 66.1
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 2.9e-104 382.5 288 67.4
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 4.9e-104 381.7 281 67.6
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 4.9e-104 381.7 288 68.1
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 6.4e-104 381.3 283 65.4
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 8.4e-104 380.9 283 66.4
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 8.4e-104 380.9 286 65.0
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 1.1e-103 380.6 286 64.7
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 2.4e-103 379.4 283 65.7
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 2.4e-103 379.4 283 66.1
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 3.2e-103 379.0 288 65.3
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 4.2e-103 378.6 281 67.3
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 1.2e-102 377.1 279 67.0
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 1.6e-102 376.7 288 66.0
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 2.1e-102 376.3 279 67.0
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 2.7e-102 375.9 288 64.9
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 3.5e-102 375.6 280 70.4
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 7.9e-102 374.4 288 65.6
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 1.7e-101 373.2 288 64.9
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 4.3e-100 368.6 279 68.1
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 9.6e-100 367.5 283 65.7
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 1.6e-99 366.7 279 64.9
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 6.2e-99 364.8 288 63.5
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 8.1e-99 364.4 283 64.0
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 2.4e-98 362.8 282 66.0
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 3.1e-98 362.5 284 63.0
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 4.0e-98 362.1 279 65.2
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 1.2e-97 360.5 279 63.1
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 1.5e-97 360.1 271 65.7
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 3.4e-97 359.0 279 64.5
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 3.4e-97 359.0 279 64.2
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 7.6e-97 357.8 288 63.2
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 4.9e-96 355.1 282 67.7
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 6.4e-96 354.8 282 63.1
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 2.4e-95 352.8 288 62.2
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 2.1e-94 349.7 262 66.8
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 2.7e-94 349.4 279 63.4
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 1.3e-93 347.1 252 66.7
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 1.8e-93 346.7 247 69.2
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 1.8e-93 346.7 283 61.1
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 8.7e-93 344.4 322 56.2
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 1.1e-92 344.0 288 59.7
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 1.3e-91 340.5 271 63.1
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 9.0e-90 334.3 279 59.5
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 3.8e-88 328.9 339 53.4
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 1.4e-87 327.0 321 53.9
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 7.1e-87 324.7 236 68.6
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 1.2e-86 323.9 236 70.3
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 7.9e-86 321.2 426 44.8
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 3.0e-85 319.3 301 57.5
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 8.7e-85 317.8 284 57.7
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 5.3e-82 308.5 222 69.4
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 9.3e-79 297.7 284 54.2
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 1.0e-77 294.3 279 53.4
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 1.8e-77 293.5 196 74.0
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 3.0e-77 292.7 165 89.7
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 2.8e-75 286.2 288 54.9
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 4.5e-73 278.9 200 68.5
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 2.6e-65 253.1 244 56.6
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 3.8e-64 249.2 288 49.7
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 7.2e-55 218.4 143 75.5
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 2.8e-51 206.5 271 45.0
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 1.8e-50 203.8 310 40.0
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 4.4e-44 182.6 181 50.3
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 2.8e-38 163.3 181 51.4
Cre02.g118200 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 8.3e-35 151.8 257 38.1
Eucgr.L03082 Eucalyptus grandis HOM05D006393 ORTHO05D008088 1.6e-33 147.5 131 55.7
MCO12G460 Micromonas commoda HOM05D006393 ORTHO05D008088 1.6e-33 147.5 161 51.6
Psat6g218400 Pisum sativum HOM05D006393 ORTHO05D008088 6.6e-32 142.1 114 65.8
Glyma.05G012000 Glycine max HOM05D006393 ORTHO05D008088 7.3e-31 138.7 117 62.4
SEGI_10855 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 2.7e-25 120.2 180 41.7
Psat5g214680 Pisum sativum HOM05D006393 ORTHO05D008088 2.1e-22 110.5 92 62.0
Zm00001eb342450 Zea mays HOM05D006393 ORTHO05D008088 1.8e-21 107.5 161 40.4
Eucgr.E03680 Eucalyptus grandis HOM05D006393 ORTHO05D008088 3.1e-21 106.7 94 55.3
vmacro16552 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 1.9e-10 70.9 146 36.3
SEGI_30446 Sequoiadendron giganteum HOM05D006393 ORTHO05D000979 3.2e-10 70.1 58 56.9
SEGI_14370 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 5.4e-10 69.3 58 55.2
Actinidia20331 Actinidia chinensis HOM05D006393 ORTHO05D008088 2.8e-06 57.0 34 73.5
EL10Ac4g08415 Beta vulgaris HOM05D005699 ORTHO05D007496 8.1e-06 55.5 259 25.1


User provided reference genes

Program Settings