Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0897 Ceratophyllum demersum HOM05D000147 ORTHO05D005311 5.2e-91 337.8 183 100.0
Actinidia04308 Actinidia chinensis HOM05D000147 ORTHO05D005311 3.9e-38 162.2 150 65.3
MBI05_g29097_MAGBIO Magnolia biondii HOM05D000147 ORTHO05D005311 1.5e-37 160.2 151 65.6
QL03p044068 Quercus lobata HOM05D000147 ORTHO05D005311 3.3e-37 159.1 149 63.1
Sc10g0006770 Simmondsia chinensis HOM05D000147 ORTHO05D005311 7.3e-37 157.9 148 64.2
GSVIVG01012038001 Vitis vinifera HOM05D000147 ORTHO05D005311 2.1e-36 156.4 150 64.7
Atru.chr11.1175 Acer truncatum HOM05D000147 ORTHO05D005311 1.1e-35 154.1 153 60.8
Lj6C720G7 Lonicera japonica HOM05D000147 ORTHO05D005311 1.8e-35 153.3 150 64.0
AUR62017703 Chenopodium quinoa HOM05D000147 ORTHO05D005311 3.1e-35 152.5 148 59.5
RcHm_v2.0_Chr4g0446611 Rosa chinensis HOM05D000147 ORTHO05D005311 4.0e-35 152.1 149 63.1
AUR62032985 Chenopodium quinoa HOM05D000147 ORTHO05D005311 6.9e-35 151.4 148 58.8
Cc11_g00140 Coffea canephora HOM05D000147 ORTHO05D005311 6.9e-35 151.4 150 62.7
Duzib248G1409 Durio zibethinus HOM05D000147 ORTHO05D005311 9.0e-35 151.0 150 62.7
TAR381G0407 Trochodendron aralioides HOM05D000147 ORTHO05D005311 1.2e-34 150.6 150 62.0
Cpa.g.sc0.169 Carica papaya HOM05D000147 ORTHO05D005311 1.5e-34 150.2 150 62.7
EL10Ac9g22954 Beta vulgaris HOM05D000147 ORTHO05D005311 3.4e-34 149.1 148 56.8
THA.LOC104826507 Tarenaya hassleriana HOM05D000147 ORTHO05D005311 3.4e-34 149.1 149 62.4
CANSAT64G1147 Cannabis sativa HOM05D000147 ORTHO05D005311 4.5e-34 148.7 149 58.4
HPP92_013075 Vanilla planifolia HOM05D000147 ORTHO05D005311 4.5e-34 148.7 150 62.0
FvH4_4g36860 Fragaria vesca HOM05D000147 ORTHO05D005311 5.8e-34 148.3 149 61.1
FAN12G4124 Fragaria x ananassa HOM05D000147 ORTHO05D005311 5.8e-34 148.3 151 60.9
Thecc.02G160800 Theobroma cacao HOM05D000147 ORTHO05D005311 5.8e-34 148.3 150 62.0
CiPaw.05G168400 Carya illinoinensis HOM05D000147 ORTHO05D005311 7.6e-34 147.9 149 61.1
Sed0010099 Sechium edule HOM05D000147 ORTHO05D005311 1.3e-33 147.1 149 58.4
CSS0012305 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D005311 1.7e-33 146.7 150 62.7
CsaV3_7G030550 Cucumis sativus L. HOM05D000147 ORTHO05D005311 2.2e-33 146.4 148 55.4
FAN07G2667 Fragaria x ananassa HOM05D000147 ORTHO05D005311 2.2e-33 146.4 149 59.7
Gohir.D12G137800 Gossypium hirsutum HOM05D000147 ORTHO05D005311 2.2e-33 146.4 150 58.0
Gorai.008G149300 Gossypium raimondii HOM05D000147 ORTHO05D005311 2.2e-33 146.4 150 58.0
MELO3C023601.2 Cucumis melo HOM05D000147 ORTHO05D005311 2.9e-33 146.0 148 60.1
Rhsim09G0074800 Rhododendron simsii HOM05D000147 ORTHO05D005311 2.9e-33 146.0 150 62.0
ClCG09G004590 Citrullus lanatus HOM05D000147 ORTHO05D005311 3.8e-33 145.6 148 60.8
Gohir.A12G134200 Gossypium hirsutum HOM05D000147 ORTHO05D005311 4.9e-33 145.2 150 58.0
COL.COLO4_08994 Corchorus olitorius HOM05D000147 ORTHO05D005311 6.4e-33 144.8 150 61.3
Potri.007G069800 Populus trichocarpa HOM05D000147 ORTHO05D005311 1.9e-32 143.3 159 55.3
Lalb_Chr03g0024801 Lupinus albus HOM05D000147 ORTHO05D005311 2.4e-32 142.9 157 58.6
MSTRG.23131 Avicennia marina HOM05D000147 ORTHO05D005311 4.2e-32 142.1 148 60.1
Eucgr.G02569 Eucalyptus grandis HOM05D000147 ORTHO05D005311 4.2e-32 142.1 147 59.9
Lsat_1_v5_gn_2_97540 Lactuca sativa HOM05D000147 ORTHO05D005311 4.2e-32 142.1 148 58.8
MSTRG.11456 Avicennia marina HOM05D000147 ORTHO05D005311 7.1e-32 141.4 152 57.9
Hund08554 Selenicereus undatus HOM05D000147 ORTHO05D005311 7.1e-32 141.4 148 58.8
DCAR_002570 Daucus carota HOM05D000147 ORTHO05D005311 1.6e-31 140.2 151 56.3
ECA246G2622 Erigeron canadensis HOM05D000147 ORTHO05D005311 1.6e-31 140.2 148 56.1
HanXRQChr15g0472181 Helianthus annuus HOM05D000147 ORTHO05D005311 1.6e-31 140.2 148 56.1
TWI77G0661 Tripterygium wilfordii HOM05D000147 ORTHO05D005311 1.6e-31 140.2 151 61.6
vmacro10897 Vaccinium macrocarpon HOM05D000147 ORTHO05D005311 1.6e-31 140.2 148 60.1
ATR0564G231 Amborella trichopoda HOM05D000147 ORTHO05D005311 2.7e-31 139.4 150 58.7
arahy.Tifrunner.gnm1.ann1.6GN5UX Arachis hypogaea HOM05D000147 ORTHO05D005311 2.7e-31 139.4 160 58.1
arahy.Tifrunner.gnm1.ann1.7MKI8I Arachis hypogaea HOM05D000147 ORTHO05D005311 2.7e-31 139.4 160 58.1
Duzib132G0553 Durio zibethinus HOM05D000147 ORTHO05D005311 2.7e-31 139.4 150 60.0
Prupe.1G346700 Prunus persica HOM05D000147 ORTHO05D005311 7.9e-31 137.9 149 56.4
Potri.005G093300 Populus trichocarpa HOM05D000147 ORTHO05D005311 1.0e-30 137.5 152 57.2
FAN17G2876 Fragaria x ananassa HOM05D000147 ORTHO05D005311 1.8e-30 136.7 149 57.0
Peaxi162Scf00363g00615 Petunia axillaris HOM05D000147 ORTHO05D005311 3.0e-30 136.0 153 56.9
SGA_v2.0_scaffold90G27912 Striga asiatica HOM05D000147 ORTHO05D005311 3.0e-30 136.0 148 60.8
TWI74G0983 Tripterygium wilfordii HOM05D000147 ORTHO05D005311 3.0e-30 136.0 150 58.0
Solyc02g014350.4 Solanum lycopersicum HOM05D000147 ORTHO05D005311 3.9e-30 135.6 153 57.5
Sopen02g003380 Solanum pennellii HOM05D000147 ORTHO05D005311 3.9e-30 135.6 153 57.5
Cfa008733 Carpinus fangiana HOM05D000147 ORTHO05D005311 5.1e-30 135.2 151 58.9
TAR628G0689 Trochodendron aralioides HOM05D000147 ORTHO05D005311 5.1e-30 135.2 138 63.8
Sabra05G0077400 Salix brachista HOM05D000147 ORTHO05D005311 6.7e-30 134.8 150 58.7
CAN.G157.20 Capsicum annuum HOM05D000147 ORTHO05D005311 8.7e-30 134.4 153 58.2
Nn5g28890 Nelumbo nucifera HOM05D000147 ORTHO05D005311 1.9e-29 133.3 149 61.1
Phvul.011G030700 Phaseolus vulgaris HOM05D000147 ORTHO05D005311 1.9e-29 133.3 159 55.3
Migut.I00007 Erythranthe guttata HOM05D000147 ORTHO05D005311 3.3e-29 132.5 148 56.8
SalBow5G3528 Salvia bowleyana HOM05D000147 ORTHO05D005311 3.3e-29 132.5 149 59.1
Aqoxy6G00466 Aquilegia oxysepala HOM05D000147 ORTHO05D005311 1.6e-28 130.2 148 60.1
Haze_11748 Corylus avellana HOM05D000147 ORTHO05D005311 1.6e-28 130.2 152 57.2
Manes.02G219800 Manihot esculenta HOM05D000147 ORTHO05D005311 1.1e-27 127.5 149 56.4
MD16G1001500 Malus domestica HOM05D000147 ORTHO05D005311 6.9e-27 124.8 149 57.7
PGR142G0037 Punica granatum HOM05D000147 ORTHO05D005311 1.5e-26 123.6 150 54.0
Psat7g173240 Pisum sativum HOM05D000147 ORTHO05D005311 3.4e-26 122.5 157 54.1
Sabra07G0057200 Salix brachista HOM05D000147 ORTHO05D005311 7.6e-26 121.3 160 53.8
Oeu016388.3 Olea europaea HOM05D000147 ORTHO05D005311 9.9e-26 120.9 149 55.7
Ah.01g012370 Amaranthus hybridus HOM05D000147 ORTHO05D005311 1.7e-25 120.2 154 48.7
CiPaw.06G059800 Carya illinoinensis HOM05D000147 ORTHO05D005311 2.2e-25 119.8 150 54.0
Lalb_Chr19g0139371 Lupinus albus HOM05D000147 ORTHO05D005311 2.2e-25 119.8 157 52.9
Ciclev10033876m.g Citrus clementina HOM05D000147 ORTHO05D005311 2.9e-25 119.4 148 52.0
Glyma.12G027500 Glycine max HOM05D000147 ORTHO05D005311 3.8e-25 119.0 157 52.2
Glyma.11G101600 Glycine max HOM05D000147 ORTHO05D005311 8.4e-25 117.9 156 52.6
Sabra07G0058200 Salix brachista HOM05D000083 ORTHO05D003582 8.4e-25 117.9 160 55.0
Sp1g37010 Schrenkiella parvula HOM05D000147 ORTHO05D005311 1.1e-24 117.5 137 56.9
Sabra07G0057800 Salix brachista HOM05D000147 ORTHO05D005311 1.4e-24 117.1 149 56.4
Lj3g0018243 Lotus japonicus HOM05D000147 ORTHO05D005311 3.2e-24 115.9 94 68.1
Ca_19029_v3 Cicer arietinum L. HOM05D000147 ORTHO05D005311 7.1e-24 114.8 157 52.9
Medtr4g074920 Medicago truncatula HOM05D000147 ORTHO05D005311 1.6e-23 113.6 155 51.6
VMungo1127G1912 Vigna mungo HOM05D000147 ORTHO05D005311 1.6e-23 113.6 159 50.9
PSO210G5900 Papaver somniferum HOM05D000147 ORTHO05D005311 2.7e-23 112.8 158 48.7
PSO170G3341 Papaver somniferum HOM05D000147 ORTHO05D005311 7.9e-23 111.3 158 47.5
PSO541G5327 Papaver somniferum HOM05D000147 ORTHO05D005311 7.9e-23 111.3 82 69.5
unitig_26.g9622 Utricularia gibba HOM05D000147 ORTHO05D005311 1.0e-22 110.9 148 48.6
Carub.0001s3929 Capsella rubella HOM05D000147 ORTHO05D005311 1.8e-22 110.2 148 48.0
CARHR095260 Cardamine hirsuta HOM05D000147 ORTHO05D005311 1.8e-22 110.2 152 50.0
PSO675G6018 Papaver somniferum HOM05D000147 ORTHO05D005311 3.0e-22 109.4 82 68.3
Sed0001066 Sechium edule HOM05D000147 ORTHO05D005311 3.0e-22 109.4 148 52.7
Carub.0003s1961 Capsella rubella HOM05D000147 ORTHO05D005311 6.7e-22 108.2 155 48.4
AL1G57780 Arabidopsis lyrata HOM05D000147 ORTHO05D005311 8.7e-22 107.8 137 49.6
CDE04G2917 Ceratophyllum demersum HOM05D000147 ORTHO05D005311 8.7e-22 107.8 80 82.5
Sabra07G0058600 Salix brachista HOM05D000147 ORTHO05D005311 8.7e-22 107.8 143 53.8
Ah.01g001490 Amaranthus hybridus HOM05D000147 ORTHO05D005311 1.9e-21 106.7 148 51.4
Thhalv10011206m.g Eutrema salsugineum HOM05D000147 ORTHO05D005311 1.9e-21 106.7 137 53.3
Thhalv10019988m.g Eutrema salsugineum HOM05D000147 ORTHO05D005311 2.5e-21 106.3 172 45.9
AL3G33200 Arabidopsis lyrata HOM05D000147 ORTHO05D005311 3.3e-21 105.9 162 48.8
MD13G1006500 Malus domestica HOM05D000147 ORTHO05D005311 9.6e-21 104.4 149 50.3
Aa31LG8G6540 Aethionema arabicum HOM05D000147 ORTHO05D005311 1.3e-20 104.0 152 49.3
C01p44370 Brassica napus HOM05D000147 ORTHO05D005311 1.3e-20 104.0 154 48.1
BolC1t04402H Brassica oleracea HOM05D000147 ORTHO05D005311 1.3e-20 104.0 154 48.1
Aa31LG10G4010 Aethionema arabicum HOM05D000147 ORTHO05D005311 2.1e-20 103.2 152 50.7
AT1G50140 Arabidopsis thaliana HOM05D000147 ORTHO05D005311 2.1e-20 103.2 137 52.6
HanXRQChr06g0171471 Helianthus annuus HOM05D000147 ORTHO05D005311 2.1e-20 103.2 148 50.0
Sp3g17770 Schrenkiella parvula HOM05D000147 ORTHO05D005311 3.7e-20 102.4 153 49.0
TPR.G32339 Trifolium pratense HOM05D000147 ORTHO05D005311 4.8e-20 102.1 154 45.5
BraA08t32364Z Brassica rapa HOM05D000147 ORTHO05D005311 1.1e-19 100.9 137 47.4
A08p03310 Brassica napus HOM05D000147 ORTHO05D005311 1.4e-19 100.5 137 47.4
BolC3t21264H Brassica oleracea HOM05D000147 ORTHO05D005311 1.8e-19 100.1 137 47.4
BcaC01g01214 Brassica carinata HOM05D000147 ORTHO05D005311 4.0e-19 99.0 137 46.7
C03p89500 Brassica napus HOM05D000147 ORTHO05D005311 5.3e-19 98.6 137 46.0
Zm00001eb194420 Zea mays HOM05D000147 ORTHO05D005311 5.3e-19 98.6 151 48.3
CARHR040190 Cardamine hirsuta HOM05D000147 ORTHO05D005311 6.9e-19 98.2 137 49.6
SEGI_13050 Sequoiadendron giganteum HOM05D000147 ORTHO05D005311 2.0e-18 96.7 149 46.3
A01p34960 Brassica napus HOM05D000147 ORTHO05D005311 3.4e-18 95.9 152 45.4
BraA01t03579Z Brassica rapa HOM05D000147 ORTHO05D005311 3.4e-18 95.9 152 45.4
Nitab4.5_0000739g0030 Nicotiana tabacum HOM05D000147 ORTHO05D005311 3.4e-18 95.9 117 56.4
AT3G19740 Arabidopsis thaliana HOM05D000147 ORTHO05D005311 1.7e-17 93.6 160 45.6
Lj3g0004493 Lotus japonicus HOM05D000147 ORTHO05D025190 1.9e-16 90.1 173 38.7
Lj3g0009641 Lotus japonicus HOM05D000147 ORTHO05D005311 6.0e-15 85.1 179 38.0
Migut.D01932 Erythranthe guttata HOM05D000147 ORTHO05D005311 1.5e-13 80.5 93 52.7
Mapoly0092s0039 Marchantia polymorpha HOM05D000147 ORTHO05D005311 1.5e-13 80.5 131 43.5
Pp3c18_15920 Physcomitrium patens HOM05D000147 ORTHO05D005311 3.3e-13 79.3 149 38.3
SalBow2G1925 Salvia bowleyana HOM05D000147 ORTHO05D005311 3.3e-13 79.3 65 61.5
Pp3c5_8900 Physcomitrium patens HOM05D000147 ORTHO05D005311 1.3e-12 77.4 147 36.7
Migut.D01933 Erythranthe guttata HOM05D000147 ORTHO05D005311 1.1e-11 74.3 91 51.6
Sabra07G0058100 Salix brachista HOM05D000083 ORTHO05D003582 1.1e-11 74.3 122 51.6
SGA_v2.0_scaffold7G04135 Striga asiatica HOM05D000147 ORTHO05D406079 3.2e-08 62.8 92 44.6
PSO675G5197 Papaver somniferum HOM05D000147 ORTHO05D005311 5.5e-08 62.0 111 40.5
MBI18_g13695_MAGBIO Magnolia biondii HOM05D000147 ORTHO05D001254 2.7e-07 59.7 66 47.0
HPP92_017220 Vanilla planifolia HOM05D000147 ORTHO05D001254 2.7e-07 59.7 68 44.1
PSO063G5156 Papaver somniferum HOM05D000147 ORTHO05D001254 7.9e-07 58.2 64 43.8
PSO782G2454 Papaver somniferum HOM05D000147 ORTHO05D001254 2.3e-06 56.6 64 42.2
SEGI_13949 Sequoiadendron giganteum HOM05D000147 ORTHO05D001254 5.1e-06 55.5 62 43.5
FAN08G1383 Fragaria x ananassa HOM05D000147 ORTHO05D001254 6.7e-06 55.1 66 40.9
SMO198G0041 Selaginella moellendorffii HOM05D000147 ORTHO05D377854 6.7e-06 55.1 84 41.7
Gohir.A08G101000 Gossypium hirsutum HOM05D000147 ORTHO05D001254 8.8e-06 54.7 68 44.1
Gohir.A08G101080 Gossypium hirsutum HOM05D000147 ORTHO05D001254 8.8e-06 54.7 68 44.1


User provided reference genes

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