Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0862 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 6.1e-97 357.5 178 100.0
Cfa018227 Carpinus fangiana HOM05D003420 ORTHO05D003970 1.0e-75 287.0 181 78.5
Haze_17875 Corylus avellana HOM05D003420 ORTHO05D003970 5.1e-75 284.6 181 77.9
Actinidia22448 Actinidia chinensis HOM05D003420 ORTHO05D003970 1.5e-74 283.1 181 76.2
CiPaw.15G007400 Carya illinoinensis HOM05D003420 ORTHO05D003970 2.5e-74 282.3 181 77.3
TWI32G0430 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 2.5e-74 282.3 181 76.8
Aqoxy2G01386 Aquilegia oxysepala HOM05D003420 ORTHO05D003970 3.3e-74 282.0 182 76.4
GSVIVG01022846001 Vitis vinifera HOM05D003420 ORTHO05D003970 3.3e-74 282.0 181 76.2
Potri.019G088100 Populus trichocarpa HOM05D003420 ORTHO05D003970 9.5e-74 280.4 181 75.7
CSS0045751 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 1.6e-73 279.6 181 75.7
Sc02g0003530 Simmondsia chinensis HOM05D003420 ORTHO05D003970 1.6e-73 279.6 181 76.2
CSS0008854 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 2.1e-73 279.3 181 74.6
Cc10_g06190 Coffea canephora HOM05D003420 ORTHO05D003970 2.8e-73 278.9 181 75.1
Sabra13G0099500 Salix brachista HOM05D003420 ORTHO05D003970 4.7e-73 278.1 181 74.6
Prupe.4G277400 Prunus persica HOM05D003420 ORTHO05D003970 8.1e-73 277.3 181 75.1
THA.LOC104800101 Tarenaya hassleriana HOM05D003420 ORTHO05D003970 8.1e-73 277.3 181 74.6
Potri.013G117400 Populus trichocarpa HOM05D003420 ORTHO05D003970 1.4e-72 276.6 181 74.6
CANSAT25G1859 Cannabis sativa HOM05D003420 ORTHO05D003970 1.8e-72 276.2 181 74.6
MBI05_g43692_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 1.8e-72 276.2 182 73.6
Lj4g0005231 Lotus japonicus HOM05D003420 ORTHO05D003970 2.3e-72 275.8 181 74.0
Thecc.01G140700 Theobroma cacao HOM05D003420 ORTHO05D003970 2.3e-72 275.8 181 74.6
MELO3C019945.2 Cucumis melo HOM05D003420 ORTHO05D003970 3.1e-72 275.4 182 74.7
Hma1.2p1_0276F.1_g111220 Hydrangea macrophylla HOM05D003420 ORTHO05D003970 3.1e-72 275.4 181 73.5
QL05p046655 Quercus lobata HOM05D003420 ORTHO05D003970 3.1e-72 275.4 180 74.4
TAR625G1262 Trochodendron aralioides HOM05D003420 ORTHO05D003970 3.1e-72 275.4 182 74.7
GSVIVG01038535001 Vitis vinifera HOM05D003420 ORTHO05D003970 3.1e-72 275.4 181 75.1
Duzib187G1187 Durio zibethinus HOM05D003420 ORTHO05D003970 4.0e-72 275.0 181 75.7
QL05p025142 Quercus lobata HOM05D003420 ORTHO05D003970 4.0e-72 275.0 180 73.9
SGA_v2.0_scaffold48G18027 Striga asiatica HOM05D003420 ORTHO05D003970 4.0e-72 275.0 181 76.2
Lalb_Chr01g0009891 Lupinus albus HOM05D003420 ORTHO05D003970 5.2e-72 274.6 181 74.0
Eucgr.F04156 Eucalyptus grandis HOM05D003420 ORTHO05D003970 6.8e-72 274.2 181 75.1
CiPaw.15G007500 Carya illinoinensis HOM05D003420 ORTHO05D003970 1.2e-71 273.5 181 75.7
QL02p034918 Quercus lobata HOM05D003420 ORTHO05D003970 1.5e-71 273.1 180 75.6
RcHm_v2.0_Chr3g0482841 Rosa chinensis HOM05D003420 ORTHO05D003970 2.0e-71 272.7 181 74.0
FAN05G2825 Fragaria x ananassa HOM05D003420 ORTHO05D003970 2.6e-71 272.3 181 74.0
Glyma.03G026900 Glycine max HOM05D003420 ORTHO05D003970 2.6e-71 272.3 181 73.5
MD14G1071700 Malus domestica HOM05D003420 ORTHO05D003970 2.6e-71 272.3 181 74.6
Manes.18G097100 Manihot esculenta HOM05D003420 ORTHO05D003970 2.6e-71 272.3 181 73.5
Actinidia15626 Actinidia chinensis HOM05D003420 ORTHO05D003970 3.4e-71 271.9 181 73.5
Lalb_Chr19g0129871 Lupinus albus HOM05D003420 ORTHO05D003970 4.4e-71 271.6 181 72.9
MBI02_g44124_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 4.4e-71 271.6 182 72.0
Nn8g40471 Nelumbo nucifera HOM05D003420 ORTHO05D003970 4.4e-71 271.6 185 72.4
PGR102G1634 Punica granatum HOM05D003420 ORTHO05D003970 4.4e-71 271.6 181 74.0
Zm00001eb254950 Zea mays HOM05D003420 ORTHO05D003970 4.4e-71 271.6 180 74.4
CsaV3_6G004750 Cucumis sativus L. HOM05D003420 ORTHO05D003970 5.8e-71 271.2 182 74.2
Medtr4g024570 Medicago truncatula HOM05D003420 ORTHO05D003970 5.8e-71 271.2 181 73.5
PSO447G0346 Papaver somniferum HOM05D003420 ORTHO05D003970 7.6e-71 270.8 182 74.2
Peaxi162Scf00226g00925 Petunia axillaris HOM05D003420 ORTHO05D003970 7.6e-71 270.8 181 73.5
BcaC08g46613 Brassica carinata HOM05D003420 ORTHO05D003970 9.9e-71 270.4 181 72.9
A07p37970 Brassica napus HOM05D003420 ORTHO05D003970 9.9e-71 270.4 181 72.9
C06p45890 Brassica napus HOM05D003420 ORTHO05D003970 9.9e-71 270.4 181 72.9
BolC6t39641H Brassica oleracea HOM05D003420 ORTHO05D003970 9.9e-71 270.4 181 72.9
BraA07t31362Z Brassica rapa HOM05D003420 ORTHO05D003970 9.9e-71 270.4 181 72.9
ClCG08G008720 Citrullus lanatus HOM05D003420 ORTHO05D003970 9.9e-71 270.4 182 73.6
MBI05_g36592_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 9.9e-71 270.4 182 72.5
PSO210G4421 Papaver somniferum HOM05D003420 ORTHO05D003970 9.9e-71 270.4 182 74.2
FvH4_6g24280 Fragaria vesca HOM05D003420 ORTHO05D003970 1.3e-70 270.0 181 74.0
FAN14G5243 Fragaria x ananassa HOM05D003420 ORTHO05D003970 1.3e-70 270.0 181 74.0
Psat7g231160 Pisum sativum HOM05D003420 ORTHO05D003970 1.3e-70 270.0 181 72.4
vmacro11081 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 1.3e-70 270.0 196 69.9
VMungo0331G0815 Vigna mungo HOM05D003420 ORTHO05D003970 1.3e-70 270.0 181 73.5
Carub.0002s1858 Capsella rubella HOM05D003420 ORTHO05D003970 1.7e-70 269.6 181 72.4
Sp5g26850 Schrenkiella parvula HOM05D003420 ORTHO05D003970 1.7e-70 269.6 181 72.4
SpUn0020_0120 Schrenkiella parvula HOM05D003420 ORTHO05D003970 1.7e-70 269.6 181 72.4
Atru.chr13.1894 Acer truncatum HOM05D003420 ORTHO05D003970 2.2e-70 269.2 181 71.3
AT1G71820 Arabidopsis thaliana HOM05D003420 ORTHO05D003970 2.2e-70 269.2 181 72.4
Glyma.01G140600 Glycine max HOM05D003420 ORTHO05D003970 2.2e-70 269.2 181 72.9
Phvul.010G082700 Phaseolus vulgaris HOM05D003420 ORTHO05D003970 2.2e-70 269.2 181 73.5
AL2G31400 Arabidopsis lyrata HOM05D003420 ORTHO05D003970 2.9e-70 268.9 181 72.4
Thhalv10018180m.g Eutrema salsugineum HOM05D003420 ORTHO05D003970 2.9e-70 268.9 181 71.8
MBI05_g36581_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 3.8e-70 268.5 182 72.0
Sabra19G0098400 Salix brachista HOM05D003420 ORTHO05D003970 3.8e-70 268.5 212 65.6
Sabra19G0101900 Salix brachista HOM05D003420 ORTHO05D003970 3.8e-70 268.5 212 65.6
Gohir.A10G068000 Gossypium hirsutum HOM05D003420 ORTHO05D003970 4.9e-70 268.1 181 73.5
Gorai.011G117900 Gossypium raimondii HOM05D003420 ORTHO05D003970 4.9e-70 268.1 181 73.5
Gohir.D10G107600 Gossypium hirsutum HOM05D003420 ORTHO05D003970 6.4e-70 267.7 181 72.9
TPR.G31331 Trifolium pratense HOM05D003420 ORTHO05D003970 6.4e-70 267.7 181 71.8
CARHR290940 Cardamine hirsuta HOM05D003420 ORTHO05D003970 8.4e-70 267.3 181 71.8
Migut.C00172 Erythranthe guttata HOM05D003420 ORTHO05D003970 8.4e-70 267.3 181 74.0
Hund17515 Selenicereus undatus HOM05D003420 ORTHO05D003970 8.4e-70 267.3 179 74.3
Aa31LG4G8810 Aethionema arabicum HOM05D003420 ORTHO05D003970 1.4e-69 266.5 182 72.5
BcaC08g45755 Brassica carinata HOM05D003420 ORTHO05D003970 1.9e-69 266.2 178 71.9
A07p30580 Brassica napus HOM05D003420 ORTHO05D003970 1.9e-69 266.2 178 71.9
C06p35360 Brassica napus HOM05D003420 ORTHO05D003970 1.9e-69 266.2 178 71.9
BolC6t38641H Brassica oleracea HOM05D003420 ORTHO05D003970 1.9e-69 266.2 178 71.9
BraA07t30693Z Brassica rapa HOM05D003420 ORTHO05D003970 1.9e-69 266.2 178 71.9
CAN.G1010.15 Capsicum annuum HOM05D003420 ORTHO05D003970 2.4e-69 265.8 181 72.4
Nitab4.5_0001307g0060 Nicotiana tabacum HOM05D003420 ORTHO05D003970 2.4e-69 265.8 198 68.2
Oeu027630.1 Olea europaea HOM05D003420 ORTHO05D003970 2.4e-69 265.8 181 73.5
ATR0815G027 Amborella trichopoda HOM05D003420 ORTHO05D003970 3.2e-69 265.4 180 71.1
Sopen04g028480 Solanum pennellii HOM05D003420 ORTHO05D003970 3.2e-69 265.4 181 72.9
MSTRG.963 Avicennia marina HOM05D003420 ORTHO05D003970 5.4e-69 264.6 181 72.4
RcHm_v2.0_Chr1g0335041 Rosa chinensis HOM05D003420 ORTHO05D003970 7.1e-69 264.2 181 72.4
Sed0005269 Sechium edule HOM05D003420 ORTHO05D003970 1.2e-68 263.5 182 71.4
Nitab4.5_0002608g0090 Nicotiana tabacum HOM05D003420 ORTHO05D003970 2.1e-68 262.7 196 68.4
Solyc04g072290.3 Solanum lycopersicum HOM05D003420 ORTHO05D003970 2.1e-68 262.7 181 72.4
Ah.09g232700 Amaranthus hybridus HOM05D003420 ORTHO05D003970 2.7e-68 262.3 183 72.7
EL10Ac8g19742 Beta vulgaris HOM05D003420 ORTHO05D003970 4.6e-68 261.5 181 73.5
TWI32G0245 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 6.0e-68 261.2 182 70.3
AUR62027529 Chenopodium quinoa HOM05D003420 ORTHO05D003970 1.3e-67 260.0 201 67.2
AUR62030227 Chenopodium quinoa HOM05D003420 ORTHO05D003970 1.3e-67 260.0 201 67.2
Atru.chr7.57 Acer truncatum HOM05D003420 ORTHO05D003970 1.7e-67 259.6 179 70.4
Lj4C710G5 Lonicera japonica HOM05D003420 ORTHO05D003970 1.5e-66 256.5 181 70.7
Zm00001eb194380 Zea mays HOM05D003420 ORTHO05D003970 2.5e-66 255.8 179 70.4
ECA246G4467 Erigeron canadensis HOM05D003420 ORTHO05D003970 3.3e-66 255.4 180 69.4
HanXRQChr10g0278771 Helianthus annuus HOM05D003420 ORTHO05D003970 3.3e-66 255.4 180 71.1
Atru.chr13.1960 Acer truncatum HOM05D003420 ORTHO05D003970 1.2e-65 253.4 179 68.7
Manes.02G187400 Manihot esculenta HOM05D003420 ORTHO05D003970 1.2e-65 253.4 177 69.5
Haze_13393 Corylus avellana HOM05D003420 ORTHO05D003970 1.6e-65 253.1 171 73.7
Lsat_1_v5_gn_6_100921 Lactuca sativa HOM05D003420 ORTHO05D003970 2.8e-65 252.3 180 69.4
Rhsim05G0166700 Rhododendron simsii HOM05D003420 ORTHO05D003970 6.2e-65 251.1 189 66.7
arahy.Tifrunner.gnm1.ann1.GQ31QR Arachis hypogaea HOM05D003420 ORTHO05D003970 1.3e-62 243.4 165 71.5
arahy.Tifrunner.gnm1.ann1.PV9APJ Arachis hypogaea HOM05D003420 ORTHO05D003970 1.3e-62 243.4 165 71.5
DCAR_013169 Daucus carota HOM05D003420 ORTHO05D003970 3.8e-62 241.9 164 71.3
Migut.C00145 Erythranthe guttata HOM05D003420 ORTHO05D003970 3.8e-62 241.9 181 63.5
unitig_46.g18008 Utricularia gibba HOM05D003420 ORTHO05D003970 2.4e-61 239.2 208 60.1
Ciclev10000376m.g Citrus clementina HOM05D003420 ORTHO05D003970 4.2e-61 238.4 183 63.4
Atru.chr6.1390 Acer truncatum HOM05D003420 ORTHO05D003970 5.1e-59 231.5 173 65.9
HanXRQChr10g0278751 Helianthus annuus HOM05D003420 ORTHO05D003970 1.8e-56 223.0 180 61.1
Psat4g195800 Pisum sativum HOM05D003420 ORTHO05D003970 3.1e-56 222.2 179 59.2
Mapoly0001s0359 Marchantia polymorpha HOM05D003420 ORTHO05D003970 7.6e-55 217.6 179 60.3
HanXRQChr01g0002061 Helianthus annuus HOM05D003420 ORTHO05D003970 1.7e-54 216.5 178 60.7
FAN02G2135 Fragaria x ananassa HOM05D003420 ORTHO05D003970 6.4e-54 214.5 160 69.4
SMO298G0019 Selaginella moellendorffii HOM05D003420 ORTHO05D003970 6.7e-51 204.5 173 57.2
MBI02_g35948_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 5.3e-48 194.9 174 58.0
Pp3c8_3920 Physcomitrium patens HOM05D003420 ORTHO05D003970 2.6e-47 192.6 169 56.8
Ca_19958_v3 Cicer arietinum L. HOM05D003420 ORTHO05D003970 3.4e-47 192.2 159 62.3
AagrBONN_evm.TU.Sc2ySwM_228.2748 Anthoceros agrestis HOM05D003420 ORTHO05D003970 2.2e-46 189.5 171 56.1
BcaB03g15619 Brassica carinata HOM05D003420 ORTHO05D003970 4.9e-46 188.3 127 73.2
DCAR_009600 Daucus carota HOM05D003420 ORTHO05D003970 1.4e-45 186.8 137 67.9
CDE04G2480 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 8.7e-43 177.6 104 85.6
Migut.C00173 Erythranthe guttata HOM05D003420 ORTHO05D003970 8.7e-43 177.6 138 65.2
AagrBONN_evm.TU.Sc2ySwM_117.1498 Anthoceros agrestis HOM05D003420 ORTHO05D003970 1.9e-42 176.4 167 51.5
Cpa.g.sc66.125 Carica papaya HOM05D003420 ORTHO05D003970 1.4e-40 170.2 116 72.4
CBR_g30506 Chara braunii HOM05D003420 ORTHO05D003970 8.4e-38 161.0 171 49.1
Ciclev10000395m.g Citrus clementina HOM05D003420 ORTHO05D003970 9.7e-34 147.5 105 65.7
CDE04G0884 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 8.2e-33 144.4 78 92.3
BolC6t38648H Brassica oleracea HOM05D003420 ORTHO05D003970 3.4e-31 139.0 116 62.1
SEGI_21874 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 7.9e-28 127.9 81 72.8
SEGI_07888 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 4.1e-24 115.5 102 58.8
Cpa.g.sc66.124 Carica papaya HOM05D003420 ORTHO05D003970 8.5e-22 107.8 65 78.5
COL.COLO4_12104 Corchorus olitorius HOM05D003420 ORTHO05D003970 2.7e-20 102.8 125 46.4
ATR0824G022 Amborella trichopoda HOM05D003420 ORTHO05D003970 7.4e-18 94.7 63 65.1
vmacro03706 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 5.0e-14 82.0 63 63.5
MCO11G044 Micromonas commoda HOM05D003420 ORTHO05D003970 4.7e-12 75.5 150 27.3
Cre17.g744847 Chlamydomonas reinhardtii HOM05D003420 ORTHO05D003970 1.1e-10 70.9 150 32.7


User provided reference genes

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