Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0826 Ceratophyllum demersum HOM05D004260 ORTHO05D005008 3.6e-106 388.3 197 100.0
GSVIVG01035395001 Vitis vinifera HOM05D004260 ORTHO05D005008 2.1e-90 335.9 198 84.3
Thecc.09G054900 Theobroma cacao HOM05D004260 ORTHO05D005008 1.4e-89 333.2 199 81.9
Dinv27993 Davidia involucrata HOM05D004260 ORTHO05D005008 4.4e-88 328.2 197 81.7
COL.COLO4_21070 Corchorus olitorius HOM05D004260 ORTHO05D005008 1.3e-87 326.6 199 78.9
CiPaw.03G214700 Carya illinoinensis HOM05D004260 ORTHO05D005008 2.9e-87 325.5 197 81.2
TWI34G0209 Tripterygium wilfordii HOM05D004260 ORTHO05D005008 3.7e-87 325.1 201 79.6
Duzib187G0539 Durio zibethinus HOM05D004260 ORTHO05D005008 4.9e-87 324.7 200 79.0
Manes.03G034400 Manihot esculenta HOM05D004260 ORTHO05D005008 4.9e-87 324.7 197 80.2
Glyma.15G170200 Glycine max HOM05D004260 ORTHO05D005008 6.4e-87 324.3 198 82.3
GSVIVG01015195001 Vitis vinifera HOM05D004260 ORTHO05D005008 6.4e-87 324.3 198 81.3
Hma1.2p1_0544F.1_g175770 Hydrangea macrophylla HOM05D004260 ORTHO05D005008 2.4e-86 322.4 197 79.2
Manes.16G101400 Manihot esculenta HOM05D004260 ORTHO05D005008 2.4e-86 322.4 197 80.2
Dinv22892 Davidia involucrata HOM05D004260 ORTHO05D005008 3.2e-86 322.0 197 80.2
Potri.006G228100 Populus trichocarpa HOM05D004260 ORTHO05D005008 3.2e-86 322.0 201 79.6
Prupe.7G208600 Prunus persica HOM05D004260 ORTHO05D005008 3.2e-86 322.0 198 82.3
CsaV3_1G040520 Cucumis sativus L. HOM05D004260 ORTHO05D005008 4.1e-86 321.6 197 81.7
TAR383G1013 Trochodendron aralioides HOM05D004260 ORTHO05D005008 4.1e-86 321.6 198 82.3
ClCG03G015530 Citrullus lanatus HOM05D004260 ORTHO05D005008 5.4e-86 321.2 197 81.2
CANSAT56G0029 Cannabis sativa HOM05D004260 ORTHO05D005008 7.0e-86 320.9 199 80.9
Gohir.A06G087000 Gossypium hirsutum HOM05D004260 ORTHO05D005008 7.0e-86 320.9 200 77.5
Gohir.D06G086500 Gossypium hirsutum HOM05D004260 ORTHO05D005008 7.0e-86 320.9 200 77.5
QL02p062467 Quercus lobata HOM05D004260 ORTHO05D005008 9.2e-86 320.5 196 80.6
TWI63G1437 Tripterygium wilfordii HOM05D004260 ORTHO05D005008 1.6e-85 319.7 203 77.3
CSS0039252 Camellia sinensis var. sinensis HOM05D004260 ORTHO05D005008 2.7e-85 318.9 198 78.8
TWI32G1258 Tripterygium wilfordii HOM05D004260 ORTHO05D005008 3.5e-85 318.5 201 77.6
Cfa003078 Carpinus fangiana HOM05D004260 ORTHO05D005008 6.0e-85 317.8 197 79.7
Glyma.09G063400 Glycine max HOM05D004260 ORTHO05D005008 6.0e-85 317.8 198 81.3
Nn6g35497 Nelumbo nucifera HOM05D004260 ORTHO05D005008 6.0e-85 317.8 201 78.6
Lj6g0007381 Lotus japonicus HOM05D004260 ORTHO05D005008 7.8e-85 317.4 197 79.7
Sed0021939 Sechium edule HOM05D004260 ORTHO05D005008 1.0e-84 317.0 197 80.2
Dinv36773 Davidia involucrata HOM05D004260 ORTHO05D005008 1.3e-84 316.6 197 80.7
MD15G1208100 Malus domestica HOM05D004260 ORTHO05D005008 1.3e-84 316.6 197 80.2
PGR031G3480 Punica granatum HOM05D004260 ORTHO05D005008 1.3e-84 316.6 199 78.9
MSTRG.10559 Avicennia marina HOM05D004260 ORTHO05D005008 1.7e-84 316.2 197 80.2
Actinidia39712 Actinidia chinensis HOM05D004260 ORTHO05D005008 2.3e-84 315.8 197 79.2
Rhsim05G0018800 Rhododendron simsii HOM05D004260 ORTHO05D005008 2.3e-84 315.8 197 79.2
Psat1g140800 Pisum sativum HOM05D004260 ORTHO05D005008 3.9e-84 315.1 197 79.7
Nn8g38836 Nelumbo nucifera HOM05D004260 ORTHO05D005008 5.1e-84 314.7 200 78.5
THA.LOC104824639 Tarenaya hassleriana HOM05D004260 ORTHO05D005008 5.1e-84 314.7 197 77.7
Lalb_Chr08g0232171 Lupinus albus HOM05D004260 ORTHO05D005008 6.6e-84 314.3 197 76.6
MD02G1080600 Malus domestica HOM05D004260 ORTHO05D005008 6.6e-84 314.3 197 80.2
Potri.018G052900 Populus trichocarpa HOM05D004260 ORTHO05D005008 6.6e-84 314.3 201 78.1
Lalb_Chr23g0276591 Lupinus albus HOM05D004260 ORTHO05D005008 8.6e-84 313.9 197 77.2
HPP92_008780 Vanilla planifolia HOM05D004260 ORTHO05D005008 1.1e-83 313.5 204 77.9
C03p06060 Brassica napus HOM05D004260 ORTHO05D005008 1.9e-83 312.8 197 75.6
BolC3t13116H Brassica oleracea HOM05D004260 ORTHO05D005008 1.9e-83 312.8 197 75.6
Thhalv10014721m.g Eutrema salsugineum HOM05D004260 ORTHO05D005008 1.9e-83 312.8 199 75.9
vmacro17245 Vaccinium macrocarpon HOM05D004260 ORTHO05D005008 1.9e-83 312.8 197 78.2
Eucgr.C00657 Eucalyptus grandis HOM05D004260 ORTHO05D005008 3.3e-83 312.0 203 75.9
HanXRQChr09g0238081 Helianthus annuus HOM05D004260 ORTHO05D005008 3.3e-83 312.0 197 78.2
Hma1.2p1_0800F.1_g220190 Hydrangea macrophylla HOM05D004260 ORTHO05D005008 5.6e-83 311.2 198 78.8
RcHm_v2.0_Chr2g0093471 Rosa chinensis HOM05D004260 ORTHO05D005008 5.6e-83 311.2 197 77.7
Ciclev10009610m.g Citrus clementina HOM05D004260 ORTHO05D005008 7.3e-83 310.8 197 77.2
Gohir.A07G011700 Gossypium hirsutum HOM05D004260 ORTHO05D005008 7.3e-83 310.8 197 78.7
THA.LOC104799697 Tarenaya hassleriana HOM05D004260 ORTHO05D005008 7.3e-83 310.8 197 77.7
Atru.chr12.1595 Acer truncatum HOM05D004260 ORTHO05D005008 1.2e-82 310.1 197 78.2
Atru.chr7.1605 Acer truncatum HOM05D004260 ORTHO05D005008 1.6e-82 309.7 197 76.6
Cc06_g11470 Coffea canephora HOM05D004260 ORTHO05D005008 1.6e-82 309.7 197 77.7
AL6G22660 Arabidopsis lyrata HOM05D004260 ORTHO05D005008 2.1e-82 309.3 199 74.9
TPR.G28376 Trifolium pratense HOM05D004260 ORTHO05D005008 2.1e-82 309.3 197 78.2
CARHR201260 Cardamine hirsuta HOM05D004260 ORTHO05D005008 2.8e-82 308.9 199 75.4
BraA03t09866Z Brassica rapa HOM05D004260 ORTHO05D005008 3.6e-82 308.5 197 75.6
Lj4C302G2 Lonicera japonica HOM05D004260 ORTHO05D005008 3.6e-82 308.5 197 78.7
Gohir.D07G011500 Gossypium hirsutum HOM05D004260 ORTHO05D005008 4.7e-82 308.1 197 77.7
AT5G11900 Arabidopsis thaliana HOM05D004260 ORTHO05D005008 6.2e-82 307.8 199 74.4
Oeu006009.1 Olea europaea HOM05D004260 ORTHO05D005008 6.2e-82 307.8 200 77.0
Os01g0195500 Oryza sativa ssp. japonica HOM05D004260 ORTHO05D005008 1.4e-81 306.6 199 76.4
Sp6g31700 Schrenkiella parvula HOM05D004260 ORTHO05D005008 1.8e-81 306.2 199 74.4
A03p05270 Brassica napus HOM05D004260 ORTHO05D005008 2.3e-81 305.8 198 74.7
FvH4_1g07600 Fragaria vesca HOM05D004260 ORTHO05D005008 2.3e-81 305.8 197 77.7
FAN26G0564 Fragaria x ananassa HOM05D004260 ORTHO05D005008 6.8e-81 304.3 197 77.2
FAN26G1218 Fragaria x ananassa HOM05D004260 ORTHO05D005008 6.8e-81 304.3 197 77.2
BolC9t59323H Brassica oleracea HOM05D004260 ORTHO05D005008 1.2e-80 303.5 199 73.9
Lsat_1_v5_gn_7_36961 Lactuca sativa HOM05D004260 ORTHO05D005008 1.2e-80 303.5 197 76.1
Nitab4.5_0009711g0010 Nicotiana tabacum HOM05D004260 ORTHO05D005008 2.0e-80 302.8 197 75.1
EL10Ac8g19203 Beta vulgaris HOM05D004260 ORTHO05D005008 2.6e-80 302.4 197 73.1
C09p64930 Brassica napus HOM05D004260 ORTHO05D005008 2.6e-80 302.4 199 73.9
BraA10t44649Z Brassica rapa HOM05D004260 ORTHO05D005008 2.6e-80 302.4 199 73.9
BcaB01g05442 Brassica carinata HOM05D004260 ORTHO05D005008 3.4e-80 302.0 198 74.2
Sopen07g018820 Solanum pennellii HOM05D004260 ORTHO05D005008 3.4e-80 302.0 197 75.1
Ciclev10009478m.g Citrus clementina HOM05D004260 ORTHO05D005008 4.4e-80 301.6 186 78.5
Lsat_1_v5_gn_5_142620 Lactuca sativa HOM05D004260 ORTHO05D005008 5.8e-80 301.2 195 75.4
Zm00001eb120970 Zea mays HOM05D004260 ORTHO05D005008 5.8e-80 301.2 204 74.0
A10p25860 Brassica napus HOM05D004260 ORTHO05D005008 7.5e-80 300.8 199 73.4
ECA234G2134 Erigeron canadensis HOM05D000597 ORTHO05D000603 7.5e-80 300.8 195 76.9
Peaxi162Scf00498g00316 Petunia axillaris HOM05D004260 ORTHO05D005008 7.5e-80 300.8 197 74.1
Migut.L01498 Erythranthe guttata HOM05D004260 ORTHO05D005008 9.9e-80 300.4 197 75.6
MBI01_g09942_MAGBIO Magnolia biondii HOM05D004260 ORTHO05D005008 9.9e-80 300.4 199 76.4
Nitab4.5_0006570g0040 Nicotiana tabacum HOM05D004260 ORTHO05D005008 9.9e-80 300.4 198 75.8
Solyc07g039450.3 Solanum lycopersicum HOM05D004260 ORTHO05D005008 1.7e-79 299.7 197 74.6
Cpa.g.sc7.180 Carica papaya HOM05D004260 ORTHO05D005008 2.2e-79 299.3 198 73.7
Phvul.009G231900 Phaseolus vulgaris HOM05D004260 ORTHO05D005008 6.4e-79 297.7 197 76.6
Nitab4.5_0008381g0010 Nicotiana tabacum HOM05D004260 ORTHO05D005008 8.3e-79 297.4 197 74.6
FAN23G1035 Fragaria x ananassa HOM05D004260 ORTHO05D005008 1.1e-78 297.0 205 74.1
PSO832G0278 Papaver somniferum HOM05D004260 ORTHO05D005008 1.1e-78 297.0 201 74.1
PSO063G3594 Papaver somniferum HOM05D004260 ORTHO05D005008 1.4e-78 296.6 201 74.1
Carub.0006s1043 Capsella rubella HOM05D004260 ORTHO05D005008 1.9e-78 296.2 199 71.9
unitig_8.g4689 Utricularia gibba HOM05D004260 ORTHO05D005008 1.9e-78 296.2 197 75.1
VMungo1309G1896 Vigna mungo HOM05D004260 ORTHO05D005008 1.9e-78 296.2 197 76.1
Cc08_g10690 Coffea canephora HOM05D004260 ORTHO05D005008 2.4e-78 295.8 196 71.9
PGSC0003DMG400000336 Solanum tuberosum HOM05D004260 ORTHO05D005008 2.4e-78 295.8 197 73.6
AUR62029063 Chenopodium quinoa HOM05D004260 ORTHO05D005008 3.2e-78 295.4 197 71.6
FAN19G2674 Fragaria x ananassa HOM05D004260 ORTHO05D005008 3.2e-78 295.4 209 72.7
AUR62033956 Chenopodium quinoa HOM05D004260 ORTHO05D005008 4.1e-78 295.0 197 71.6
Solyc12g008910.2 Solanum lycopersicum HOM05D004260 ORTHO05D005008 7.1e-78 294.3 197 73.6
Sopen12g003830 Solanum pennellii HOM05D004260 ORTHO05D005008 9.2e-78 293.9 197 73.1
CAN.G2021.1 Capsicum annuum HOM05D004260 ORTHO05D005008 1.2e-77 293.5 199 73.4
Zm00001eb337840 Zea mays HOM05D004260 ORTHO05D005008 1.2e-77 293.5 213 70.4
Sc18g0002130 Simmondsia chinensis HOM05D004260 ORTHO05D005008 3.5e-77 292.0 220 66.8
Mapoly0060s0048 Marchantia polymorpha HOM05D004260 ORTHO05D005008 6.0e-77 291.2 195 73.3
HanXRQChr03g0060381 Helianthus annuus HOM05D004260 ORTHO05D005008 7.8e-77 290.8 197 74.6
Aqoxy7G01195 Aquilegia oxysepala HOM05D004260 ORTHO05D005008 1.3e-76 290.0 186 76.3
DCAR_032234 Daucus carota HOM05D004260 ORTHO05D005008 1.3e-76 290.0 197 73.6
Nitab4.5_0000540g0300 Nicotiana tabacum HOM05D004260 ORTHO05D005008 1.3e-76 290.0 213 68.5
Gorai.010G099800 Gossypium raimondii HOM05D004260 ORTHO05D005008 1.7e-76 289.7 182 76.9
Thecc.09G088200 Theobroma cacao HOM05D004260 ORTHO05D005008 1.7e-76 289.7 197 73.1
Sed0011229 Sechium edule HOM05D004260 ORTHO05D005008 3.9e-76 288.5 197 75.6
Sabra06G0176600 Salix brachista HOM05D004260 ORTHO05D005008 6.6e-76 287.7 223 68.2
Medtr7g023540 Medicago truncatula HOM05D004260 ORTHO05D005008 5.6e-75 284.6 198 71.7
Haze_25919 Corylus avellana HOM05D004260 ORTHO05D005008 7.3e-75 284.3 177 79.1
Pp3c12_14030 Physcomitrium patens HOM05D004260 ORTHO05D005008 3.6e-74 282.0 197 68.5
Aa31LG3G15300 Aethionema arabicum HOM05D000486 ORTHO05D000375 1.8e-73 279.6 180 75.6
Gorai.001G012200 Gossypium raimondii HOM05D004260 ORTHO05D005008 1.8e-73 279.6 179 78.2
Pp3c10_12320 Physcomitrium patens HOM05D004260 ORTHO05D005008 3.1e-73 278.9 196 68.9
TAR626G0903 Trochodendron aralioides HOM05D004260 ORTHO05D005008 8.9e-73 277.3 201 70.6
SGA_v2.0_scaffold21G09393 Striga asiatica HOM05D004260 ORTHO05D005008 4.4e-72 275.0 246 59.3
FAN28G0075 Fragaria x ananassa HOM05D004260 ORTHO05D005008 2.4e-70 269.2 177 76.8
Sabra18G0048600 Salix brachista HOM05D004260 ORTHO05D005008 7.1e-70 267.7 213 67.1
arahy.Tifrunner.gnm1.ann1.5Q7AHD Arachis hypogaea HOM05D004260 ORTHO05D005008 1.2e-69 266.9 192 69.8
COL.COLO4_18193 Corchorus olitorius HOM05D004260 ORTHO05D005008 1.2e-69 266.9 197 68.0
SalBow1G5356 Salvia bowleyana HOM05D004260 ORTHO05D005008 1.3e-68 263.5 204 69.6
ATR0626G046 Amborella trichopoda HOM05D004260 ORTHO05D005008 3.0e-68 262.3 186 72.0
Oeu041239.3 Olea europaea HOM05D004260 ORTHO05D005008 3.0e-68 262.3 218 64.2
SMO174G0261 Selaginella moellendorffii HOM05D004260 ORTHO05D005008 1.1e-67 260.4 188 69.7
SMO358G0331 Selaginella moellendorffii HOM05D004260 ORTHO05D005008 3.3e-67 258.8 190 67.4
Ca_02161_v3 Cicer arietinum L. HOM05D004260 ORTHO05D005008 2.1e-66 256.1 233 58.8
AagrBONN_evm.TU.Sc2ySwM_228.3486 Anthoceros agrestis HOM05D004260 ORTHO05D005008 8.1e-66 254.2 182 69.2
SHI18732 Sapria himalayana HOM05D004260 ORTHO05D005008 4.0e-65 251.9 182 70.9
CBR_g17727 Chara braunii HOM05D004260 ORTHO05D005008 1.1e-62 243.8 198 61.6
Duzib168G0274 Durio zibethinus HOM05D004260 ORTHO05D005008 2.1e-61 239.6 177 67.8
arahy.Tifrunner.gnm1.ann1.Z7F7FH Arachis hypogaea HOM05D004260 ORTHO05D005008 3.9e-60 235.3 197 61.9
ECA240G4046 Erigeron canadensis HOM05D004260 ORTHO05D005008 9.0e-57 224.2 201 60.7
Duzib168G0611 Durio zibethinus HOM05D004260 ORTHO05D005008 2.6e-56 222.6 158 70.9
SEGI_28146 Sequoiadendron giganteum HOM05D004260 ORTHO05D005008 4.3e-51 205.3 121 81.8
Sc08g0008490 Simmondsia chinensis HOM05D004260 ORTHO05D005008 9.0e-49 197.6 117 82.9
Aa31LG3G15370 Aethionema arabicum HOM05D004260 ORTHO05D005008 6.7e-44 181.4 180 55.6
MELO3C029330.2 Cucumis melo HOM05D004260 ORTHO05D005008 6.9e-41 171.4 98 88.8
Cc04_g14970 Coffea canephora HOM05D004260 ORTHO05D005008 1.5e-40 170.2 101 85.1
BcaC03g13398 Brassica carinata HOM05D004260 ORTHO05D005008 3.4e-40 169.1 188 55.3
PGSC0003DMG400042965 Solanum tuberosum HOM05D004260 ORTHO05D005008 4.6e-37 158.7 99 79.8
Actinidia25247 Actinidia chinensis HOM05D004260 ORTHO05D005008 7.4e-35 151.4 100 72.0
BraA02t05104Z Brassica rapa HOM05D002137 ORTHO05D002144 2.1e-29 133.3 200 44.5
BolC2t06491H Brassica oleracea HOM05D002137 ORTHO05D002144 5.1e-28 128.6 97 66.0
Nn8g38839 Nelumbo nucifera HOM05D004260 ORTHO05D005008 5.1e-28 128.6 70 90.0
MELO3C000253.2 Cucumis melo HOM05D004260 ORTHO05D005008 8.8e-28 127.9 78 74.4
Hund25937 Selenicereus undatus HOM05D004260 ORTHO05D005008 1.5e-27 127.1 79 69.6
Hund25938 Selenicereus undatus HOM05D004260 ORTHO05D005008 1.3e-26 124.0 109 62.4
PRCOL_00004295 Prasinoderma coloniale HOM05D004260 ORTHO05D005008 1.1e-22 110.9 192 35.9
Dinv42323 Davidia involucrata HOM05D004260 ORTHO05D005008 9.4e-22 107.8 100 61.0
A02p01250 Brassica napus HOM05D002137 ORTHO05D002144 7.9e-21 104.8 197 39.1
Cre07.g353550 Chlamydomonas reinhardtii HOM05D004260 ORTHO05D005008 1.0e-20 104.4 193 36.8
C02p05430 Brassica napus HOM05D002137 ORTHO05D002144 7.4e-19 98.2 197 38.1
Dinv42322 Davidia involucrata HOM05D004260 ORTHO05D005008 8.2e-18 94.7 74 66.2
SEGI_12725 Sequoiadendron giganteum HOM05D004260 ORTHO05D005008 1.8e-17 93.6 53 79.2
Dinv40360 Davidia involucrata HOM05D003556 ORTHO05D003404 5.3e-17 92.0 65 66.2
Thecc.08G139700 Theobroma cacao HOM05D004260 ORTHO05D005008 5.3e-17 92.0 69 60.9
Dinv35353 Davidia involucrata HOM05D004260 ORTHO05D005008 3.6e-13 79.3 55 67.3
Hma1.2p1_2962F.1_g330920 Hydrangea macrophylla HOM05D004260 ORTHO05D005008 1.8e-12 77.0 50 78.0
Hma1.2p1_0436F.1_g152910 Hydrangea macrophylla HOM05D004260 ORTHO05D005008 3.0e-12 76.3 52 75.0
MCO02G463 Micromonas commoda HOM05D004260 ORTHO05D005008 3.0e-12 76.3 170 34.7
CSS0010633 Camellia sinensis var. sinensis HOM05D004260 ORTHO05D005008 7.7e-08 61.6 72 47.2


User provided reference genes

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