Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0823 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 5.0e-78 294.7 181 100.0
CDE06G1640 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 2.0e-55 219.5 142 88.7
Nn5g28219 Nelumbo nucifera HOM05D005355 ORTHO05D006591 2.7e-39 166.0 126 77.0
CiPaw.05G223300 Carya illinoinensis HOM05D005355 ORTHO05D006591 2.3e-38 162.9 141 66.7
VMungo1309G2754 Vigna mungo HOM05D005355 ORTHO05D006591 6.6e-38 161.4 142 67.6
Potri.002G085000 Populus trichocarpa HOM05D005355 ORTHO05D006591 1.9e-37 159.8 138 67.4
Sabra02G0066400 Salix brachista HOM05D005355 ORTHO05D006591 2.5e-37 159.5 138 68.1
CiPaw.06G029200 Carya illinoinensis HOM05D005355 ORTHO05D006591 1.2e-36 157.1 137 66.4
CsaV3_2G014020 Cucumis sativus L. HOM05D005355 ORTHO05D006591 1.6e-36 156.8 146 63.0
Sabra05G0133000 Salix brachista HOM05D005355 ORTHO05D006591 3.6e-36 155.6 140 62.9
Lalb_Chr08g0241491 Lupinus albus HOM05D005355 ORTHO05D006591 6.1e-36 154.8 118 71.2
TAR625G0673 Trochodendron aralioides HOM05D005355 ORTHO05D006591 1.0e-35 154.1 134 68.7
Ciclev10000938m.g Citrus clementina HOM05D005355 ORTHO05D006591 1.8e-35 153.3 139 66.2
arahy.Tifrunner.gnm1.ann1.Y2U2DK Arachis hypogaea HOM05D005355 ORTHO05D006591 3.1e-35 152.5 118 69.5
Gorai.009G245100 Gossypium raimondii HOM05D005355 ORTHO05D006591 3.1e-35 152.5 127 66.9
PGR044G2411 Punica granatum HOM05D005355 ORTHO05D006591 3.1e-35 152.5 130 67.7
Duzib116G0422 Durio zibethinus HOM05D005355 ORTHO05D006591 5.2e-35 151.8 145 62.8
Manes.18G076200 Manihot esculenta HOM05D005355 ORTHO05D006591 6.8e-35 151.4 137 65.0
Atru.chr13.1433 Acer truncatum HOM05D005355 ORTHO05D006591 8.9e-35 151.0 135 64.4
GSVIVG01008886001 Vitis vinifera HOM05D005355 ORTHO05D006591 8.9e-35 151.0 138 65.9
arahy.Tifrunner.gnm1.ann1.SCI4MN Arachis hypogaea HOM05D005355 ORTHO05D006591 1.5e-34 150.2 119 68.9
Thecc.08G123400 Theobroma cacao HOM05D005355 ORTHO05D006591 1.5e-34 150.2 135 64.4
Cpa.g.sc36.50 Carica papaya HOM05D005355 ORTHO05D006591 2.0e-34 149.8 139 62.6
MD00G1157400 Malus domestica HOM05D005355 ORTHO05D006591 2.0e-34 149.8 142 62.0
MD15G1351600 Malus domestica HOM05D005355 ORTHO05D006591 2.0e-34 149.8 142 62.7
QL09p035410 Quercus lobata HOM05D005355 ORTHO05D006591 2.0e-34 149.8 130 66.2
Glyma.06G112300 Glycine max HOM05D005355 ORTHO05D006591 4.4e-34 148.7 105 75.2
RcHm_v2.0_Chr6g0295601 Rosa chinensis HOM05D005355 ORTHO05D006591 7.5e-34 147.9 130 63.8
CSS0006134 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 1.3e-33 147.1 139 61.2
CSS0023513 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 1.3e-33 147.1 139 61.2
MBI06_g20714_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.3e-33 147.1 122 72.1
MSTRG.326 Avicennia marina HOM05D005355 ORTHO05D006591 2.2e-33 146.4 138 63.8
FAN27G0453 Fragaria x ananassa HOM05D005355 ORTHO05D006591 2.2e-33 146.4 126 65.1
Medtr3g072480 Medicago truncatula HOM05D005355 ORTHO05D006591 2.2e-33 146.4 136 61.0
Potri.005G176400 Populus trichocarpa HOM05D005355 ORTHO05D006591 2.2e-33 146.4 123 65.9
Ca_15194_v3 Cicer arietinum L. HOM05D005355 ORTHO05D006591 2.9e-33 146.0 125 64.0
Sed0010827 Sechium edule HOM05D005355 ORTHO05D006591 2.9e-33 146.0 124 67.7
Duzib093G2154 Durio zibethinus HOM05D005355 ORTHO05D006591 1.4e-32 143.7 126 63.5
Glyma.04G250500 Glycine max HOM05D005355 ORTHO05D006591 1.4e-32 143.7 129 65.1
EL10Ac1g01045 Beta vulgaris HOM05D005355 ORTHO05D006591 3.2e-32 142.5 136 60.3
CANSAT25G1794 Cannabis sativa HOM05D005355 ORTHO05D006591 7.0e-32 141.4 129 62.8
FAN15G2971 Fragaria x ananassa HOM05D005355 ORTHO05D006591 9.2e-32 141.0 130 60.8
Zm00001eb113700 Zea mays HOM05D005355 ORTHO05D006591 9.2e-32 141.0 98 73.5
Eucgr.F04357 Eucalyptus grandis HOM05D005355 ORTHO05D006591 1.2e-31 140.6 125 64.0
Gohir.A06G043600 Gossypium hirsutum HOM05D005355 ORTHO05D006591 1.2e-31 140.6 133 61.7
AL6G42080 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 2.7e-31 139.4 125 64.8
MELO3C010600.2 Cucumis melo HOM05D005355 ORTHO05D006591 3.5e-31 139.0 135 61.5
Oeu062052.1 Olea europaea HOM05D005355 ORTHO05D006591 3.5e-31 139.0 133 60.2
vmacro00824 Vaccinium macrocarpon HOM05D005355 ORTHO05D006591 3.5e-31 139.0 128 62.5
FAN24G2565 Fragaria x ananassa HOM05D005355 ORTHO05D006591 4.6e-31 138.7 99 70.7
FAN20G1264 Fragaria x ananassa HOM05D005355 ORTHO05D006591 6.0e-31 138.3 99 70.7
Os11g0544600 Oryza sativa ssp. japonica HOM05D005355 ORTHO05D006591 6.0e-31 138.3 140 59.3
Phvul.009G124200 Phaseolus vulgaris HOM05D005355 ORTHO05D006591 6.0e-31 138.3 141 59.6
Psat5g132440 Pisum sativum HOM05D005355 ORTHO05D006591 1.0e-30 137.5 125 63.2
CARHR259390 Cardamine hirsuta HOM05D005355 ORTHO05D006591 1.3e-30 137.1 135 57.8
PSO170G1761 Papaver somniferum HOM05D005355 ORTHO05D006591 1.3e-30 137.1 143 57.3
Nitab4.5_0001803g0130 Nicotiana tabacum HOM05D005355 ORTHO05D006591 1.7e-30 136.7 130 62.3
PSO528G0270 Papaver somniferum HOM05D005355 ORTHO05D006591 1.7e-30 136.7 143 57.3
CAN.G127.21 Capsicum annuum HOM05D005355 ORTHO05D006591 2.3e-30 136.3 143 57.3
THA.LOC104817273 Tarenaya hassleriana HOM05D005355 ORTHO05D006591 3.9e-30 135.6 110 67.3
Sp6g09690 Schrenkiella parvula HOM05D005355 ORTHO05D006591 5.0e-30 135.2 116 62.9
Gohir.A05G234400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 6.6e-30 134.8 106 69.8
Gohir.D05G236700 Gossypium hirsutum HOM05D005355 ORTHO05D006591 6.6e-30 134.8 106 69.8
TPR.G24014 Trifolium pratense HOM05D005355 ORTHO05D006591 6.6e-30 134.8 121 62.8
ATR0104G007 Amborella trichopoda HOM05D005355 ORTHO05D006591 1.1e-29 134.0 133 59.4
Gorai.010G049600 Gossypium raimondii HOM05D005355 ORTHO05D006591 1.5e-29 133.7 138 58.7
Hund27026 Selenicereus undatus HOM05D005355 ORTHO05D006591 1.9e-29 133.3 161 54.0
Lj1g0013612 Lotus japonicus HOM05D005355 ORTHO05D006591 2.5e-29 132.9 125 62.4
DCAR_011614 Daucus carota HOM05D005355 ORTHO05D006591 3.3e-29 132.5 141 55.3
HanXRQChr04g0109451 Helianthus annuus HOM05D005355 ORTHO05D006591 5.6e-29 131.7 141 57.4
Prupe.1G500200 Prunus persica HOM05D005355 ORTHO05D006591 5.6e-29 131.7 141 57.4
CARHR036040 Cardamine hirsuta HOM05D005355 ORTHO05D006591 9.5e-29 131.0 112 60.7
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 9.5e-29 131.0 122 66.4
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.6e-28 130.2 121 65.3
Aqoxy6G00187 Aquilegia oxysepala HOM05D005355 ORTHO05D006591 2.8e-28 129.4 124 60.5
A10p07350 Brassica napus HOM05D005355 ORTHO05D006591 2.8e-28 129.4 99 65.7
BraSC36t46079Z Brassica rapa HOM05D005355 ORTHO05D006591 2.8e-28 129.4 99 65.7
Thhalv10029139m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 2.8e-28 129.4 135 57.8
MBI15_g19197_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 2.8e-28 129.4 99 71.7
TWI12G0790 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 2.8e-28 129.4 119 63.0
Lsat_1_v5_gn_5_101461 Lactuca sativa HOM05D005355 ORTHO05D006591 4.7e-28 128.6 124 61.3
AL1G52440 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 6.2e-28 128.3 119 58.8
Haze_00460 Corylus avellana HOM05D005355 ORTHO05D006591 8.0e-28 127.9 115 65.2
ECA238G0419 Erigeron canadensis HOM05D005355 ORTHO05D006591 8.0e-28 127.9 117 62.4
Migut.F01876 Erythranthe guttata HOM05D005355 ORTHO05D006591 8.0e-28 127.9 101 68.3
C06p00770 Brassica napus HOM05D005355 ORTHO05D006591 1.4e-27 127.1 126 55.6
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 1.4e-27 127.1 121 63.6
TWI56G0611 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 1.8e-27 126.7 119 64.7
Thhalv10011453m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 2.3e-27 126.3 125 58.4
Gohir.D06G044400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 2.3e-27 126.3 140 56.4
ClCG08G005570 Citrullus lanatus HOM05D005355 ORTHO05D006591 3.1e-27 125.9 95 70.5
AT1G44780 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 6.8e-27 124.8 119 57.1
Cc00_g04310 Coffea canephora HOM05D005355 ORTHO05D006591 1.5e-26 123.6 122 58.2
Solyc11g012920.3 Solanum lycopersicum HOM05D005355 ORTHO05D006591 2.0e-26 123.2 129 55.0
Sopen11g007660 Solanum pennellii HOM05D005355 ORTHO05D006591 2.0e-26 123.2 129 55.0
AT4G08310 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 7.5e-26 121.3 107 64.5
Carub.0006s2687 Capsella rubella HOM05D005355 ORTHO05D006591 9.8e-26 120.9 100 66.0
Aa31LG9G14260 Aethionema arabicum HOM05D005355 ORTHO05D006591 1.7e-25 120.2 118 60.2
Sp1g33640 Schrenkiella parvula HOM05D005355 ORTHO05D006591 1.7e-25 120.2 128 53.9
Dinv27329 Davidia involucrata HOM05D005355 ORTHO05D006591 2.2e-25 119.8 132 58.3
SGA_v2.0_scaffold122G33176 Striga asiatica HOM05D005355 ORTHO05D006591 3.7e-25 119.0 147 51.7
BcaB07g33934 Brassica carinata HOM05D005355 ORTHO05D006591 4.9e-25 118.6 101 58.4
SHI29459 Sapria himalayana HOM05D005355 ORTHO05D006591 1.1e-24 117.5 130 52.3
BcaC08g42867 Brassica carinata HOM05D005355 ORTHO05D006591 5.4e-24 115.2 110 55.5
BolC6t35219H Brassica oleracea HOM05D005355 ORTHO05D006591 5.4e-24 115.2 110 55.5
AagrBONN_evm.TU.Sc2ySwM_362.1810 Anthoceros agrestis HOM05D005355 ORTHO05D006591 9.2e-24 114.4 131 55.7
Carub.0001s3530 Capsella rubella HOM05D005355 ORTHO05D006591 2.5e-21 106.3 111 53.2
unitig_52.g17510 Utricularia gibba HOM05D005355 ORTHO05D006467 7.3e-21 104.8 172 44.2
Pp3c21_16190 Physcomitrium patens HOM05D005355 ORTHO05D006591 2.8e-20 102.8 108 51.9
COL.COLO4_35946 Corchorus olitorius HOM05D005355 ORTHO05D006591 2.3e-19 99.8 97 57.7
SMO230G0121 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 2.3e-19 99.8 116 50.0
Cfa016002 Carpinus fangiana HOM05D005355 ORTHO05D006591 8.9e-19 97.8 95 61.1
SMO230G0058 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 2.0e-18 96.7 142 43.0
RhsimUnG0093800 Rhododendron simsii HOM05D005355 ORTHO05D006591 7.5e-18 94.7 94 59.6
CBR_g29492 Chara braunii HOM05D005355 ORTHO05D006591 8.3e-17 91.3 96 49.0
Sc01g0001210 Simmondsia chinensis HOM05D005355 ORTHO05D006591 2.4e-16 89.7 79 59.5
FvH4_2g26711 Fragaria vesca HOM05D005355 ORTHO05D006591 7.1e-16 88.2 63 68.3
AUR62019052 Chenopodium quinoa HOM05D005355 ORTHO05D006591 4.6e-15 85.5 94 52.1
Nitab4.5_0001273g0020 Nicotiana tabacum HOM05D005355 ORTHO05D006591 1.7e-14 83.6 67 67.2
Lj4A622G14 Lonicera japonica HOM05D005355 ORTHO05D006591 6.6e-14 81.6 94 57.4
SMO367G1068 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 6.6e-14 81.6 83 56.6
AUR62027892 Chenopodium quinoa HOM05D005355 ORTHO05D006591 8.6e-14 81.3 103 49.5
Mapoly0004s0202 Marchantia polymorpha HOM05D005355 ORTHO05D006591 1.6e-12 77.0 125 36.8
SEGI_25872 Sequoiadendron giganteum HOM05D005355 ORTHO05D006591 2.4e-08 63.2 92 40.2
Cre12.g539750 Chlamydomonas reinhardtii HOM05D005355 ORTHO05D006591 3.0e-06 56.2 87 37.9
HPP92_011157 Vanilla planifolia HOM05D005355 ORTHO05D006591 3.9e-06 55.8 89 42.7
SGA_v2.0_scaffold340G49301 Striga asiatica HOM05D005355 ORTHO05D006591 8.7e-06 54.7 86 45.3


User provided reference genes

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