Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0775 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 3.7e-91 338.2 172 100.0
CDE06G1048 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 2.9e-51 205.7 101 97.0
CDE08G0849 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 5.1e-48 194.9 101 93.1
ATR0820G225 Amborella trichopoda HOM05D003642 ORTHO05D004460 1.5e-39 166.8 99 74.7
Nn6g34944 Nelumbo nucifera HOM05D003642 ORTHO05D004460 5.6e-39 164.9 103 74.8
PSO339G5820 Papaver somniferum HOM05D003642 ORTHO05D004460 2.1e-38 162.9 103 73.8
Aqoxy2G01228 Aquilegia oxysepala HOM05D003642 ORTHO05D004460 1.1e-37 160.6 99 73.7
CANSAT54G0701 Cannabis sativa HOM05D003642 ORTHO05D004460 1.1e-37 160.6 103 71.8
PSO384G4986 Papaver somniferum HOM05D003642 ORTHO05D004460 1.8e-37 159.8 103 71.8
Atru.chr3.3290 Acer truncatum HOM05D003642 ORTHO05D004460 3.1e-37 159.1 99 73.7
TAR369G0931 Trochodendron aralioides HOM05D003642 ORTHO05D004460 3.1e-37 159.1 99 74.7
Ca_19399_v3 Cicer arietinum L. HOM05D003642 ORTHO05D004460 4.0e-37 158.7 94 78.7
MBI17_g01557_MAGBIO Magnolia biondii HOM05D003642 ORTHO05D004460 4.0e-37 158.7 94 75.5
HanXRQChr01g0024131 Helianthus annuus HOM05D003642 ORTHO05D004460 5.3e-37 158.3 94 79.8
CDE02G0744 Ceratophyllum demersum HOM05D003642 ORTHO05D004460 6.9e-37 157.9 100 69.0
ECA248G0168 Erigeron canadensis HOM05D003642 ORTHO05D002466 6.9e-37 157.9 94 79.8
Ciclev10028611m.g Citrus clementina HOM05D003642 ORTHO05D004460 1.2e-36 157.1 94 79.8
MBI01_g03598_MAGBIO Magnolia biondii HOM05D003642 ORTHO05D004460 1.2e-36 157.1 99 69.7
Peaxi162Scf00091g00013 Petunia axillaris HOM05D003642 ORTHO05D004460 1.5e-36 156.8 101 70.3
Duzib150G1635 Durio zibethinus HOM05D003642 ORTHO05D004460 2.0e-36 156.4 99 72.7
HanXRQChr11g0346801 Helianthus annuus HOM05D003642 ORTHO05D004460 2.0e-36 156.4 94 78.7
Medtr4g053520 Medicago truncatula HOM05D003642 ORTHO05D004460 2.0e-36 156.4 94 75.5
RcHm_v2.0_Chr5g0044221 Rosa chinensis HOM05D003642 ORTHO05D004460 2.0e-36 156.4 101 73.3
TPR.G17216 Trifolium pratense HOM05D003642 ORTHO05D004460 2.0e-36 156.4 94 78.7
Gohir.D07G113300 Gossypium hirsutum HOM05D003642 ORTHO05D004460 2.6e-36 156.0 94 76.6
Gorai.001G121600 Gossypium raimondii HOM05D003642 ORTHO05D004460 2.6e-36 156.0 94 76.6
CAN.G919.22 Capsicum annuum HOM05D003642 ORTHO05D004460 3.4e-36 155.6 101 70.3
Potri.004G184200 Populus trichocarpa HOM05D003642 ORTHO05D004460 3.4e-36 155.6 101 73.3
Solyc06g074370.3 Solanum lycopersicum HOM05D003642 ORTHO05D004460 4.5e-36 155.2 101 71.3
FAN21G1092 Fragaria x ananassa HOM05D003642 ORTHO05D004460 5.8e-36 154.8 101 71.3
FAN25G1659 Fragaria x ananassa HOM05D003642 ORTHO05D004460 5.8e-36 154.8 101 71.3
Gohir.A07G109500 Gossypium hirsutum HOM05D003642 ORTHO05D004460 5.8e-36 154.8 94 75.5
Glyma.12G088200 Glycine max HOM05D003642 ORTHO05D004460 7.6e-36 154.5 94 76.6
Sopen06g030830 Solanum pennellii HOM05D003642 ORTHO05D004460 7.6e-36 154.5 101 71.3
PGSC0003DMG400007143 Solanum tuberosum HOM05D003642 ORTHO05D004460 1.0e-35 154.1 101 71.3
Duzib170G0814 Durio zibethinus HOM05D003642 ORTHO05D004460 1.3e-35 153.7 101 72.3
MD03G1142400 Malus domestica HOM05D003642 ORTHO05D004460 1.3e-35 153.7 101 70.3
Nitab4.5_0005324g0040 Nicotiana tabacum HOM05D003642 ORTHO05D004460 1.3e-35 153.7 101 69.3
Sabra04G0123900 Salix brachista HOM05D003642 ORTHO05D004460 1.3e-35 153.7 101 73.3
Thecc.09G285800 Theobroma cacao HOM05D003642 ORTHO05D004460 1.3e-35 153.7 101 72.3
Actinidia07238 Actinidia chinensis HOM05D003642 ORTHO05D004460 1.7e-35 153.3 101 71.3
Gohir.D05G084500 Gossypium hirsutum HOM05D003642 ORTHO05D004460 1.7e-35 153.3 99 72.7
Hma1.2p1_0305F.1_g119710 Hydrangea macrophylla HOM05D003642 ORTHO05D004460 2.2e-35 152.9 94 74.5
Hma1.2p1_0305F.1_g119720 Hydrangea macrophylla HOM05D003642 ORTHO05D004460 2.2e-35 152.9 94 74.5
Hma1.2p1_0578F.1_g182375 Hydrangea macrophylla HOM05D003642 ORTHO05D004460 2.2e-35 152.9 94 74.5
MD11G1162900 Malus domestica HOM05D003642 ORTHO05D004460 2.2e-35 152.9 94 75.5
Nn2g14115 Nelumbo nucifera HOM05D003642 ORTHO05D004460 2.2e-35 152.9 88 78.4
Rhsim13G0110400 Rhododendron simsii HOM05D003642 ORTHO05D004460 2.2e-35 152.9 105 71.4
FAN16G3636 Fragaria x ananassa HOM05D003642 ORTHO05D004460 2.9e-35 152.5 101 70.3
Gohir.A05G081500 Gossypium hirsutum HOM05D003642 ORTHO05D004460 2.9e-35 152.5 99 72.7
Gorai.009G086400 Gossypium raimondii HOM05D003642 ORTHO05D004460 2.9e-35 152.5 99 72.7
Psat7g189000 Pisum sativum HOM05D003642 ORTHO05D004460 2.9e-35 152.5 94 77.7
COL.COLO4_19910 Corchorus olitorius HOM05D003642 ORTHO05D004460 4.9e-35 151.8 101 70.3
Nitab4.5_0002002g0040 Nicotiana tabacum HOM05D003642 ORTHO05D004460 4.9e-35 151.8 101 68.3
Phvul.011G093000 Phaseolus vulgaris HOM05D003642 ORTHO05D004460 4.9e-35 151.8 94 74.5
Prupe.6G127500 Prunus persica HOM05D003642 ORTHO05D004460 4.9e-35 151.8 101 68.3
Haze_23398 Corylus avellana HOM05D003642 ORTHO05D004460 6.5e-35 151.4 98 74.5
Cfa010037 Carpinus fangiana HOM05D003642 ORTHO05D004460 8.4e-35 151.0 105 69.5
Manes.11G160800 Manihot esculenta HOM05D003642 ORTHO05D004460 8.4e-35 151.0 101 71.3
PSO210G3660 Papaver somniferum HOM05D003642 ORTHO05D004460 8.4e-35 151.0 98 73.5
Lalb_Chr03g0028031 Lupinus albus HOM05D003642 ORTHO05D004460 1.1e-34 150.6 101 69.3
Glyma.11G184200 Glycine max HOM05D003642 ORTHO05D004460 1.4e-34 150.2 94 74.5
MELO3C021417.2 Cucumis melo HOM05D003642 ORTHO05D004460 1.9e-34 149.8 94 74.5
CsaV3_6G015050 Cucumis sativus L. HOM05D003642 ORTHO05D004460 1.9e-34 149.8 94 74.5
SEGI_33073 Sequoiadendron giganteum HOM05D003642 ORTHO05D004460 1.9e-34 149.8 103 68.9
arahy.Tifrunner.gnm1.ann1.U1TIAA Arachis hypogaea HOM05D003642 ORTHO05D004460 2.5e-34 149.4 94 73.4
Lj3g0020685 Lotus japonicus HOM05D003642 ORTHO05D004460 2.5e-34 149.4 94 74.5
PGR102G1012 Punica granatum HOM05D003642 ORTHO05D004460 3.2e-34 149.1 92 76.1
Sed0019020 Sechium edule HOM05D003642 ORTHO05D004460 3.2e-34 149.1 94 73.4
THA.LOC104800538 Tarenaya hassleriana HOM05D003642 ORTHO05D004460 3.2e-34 149.1 99 69.7
TWI31G0358 Tripterygium wilfordii HOM05D003642 ORTHO05D004460 3.2e-34 149.1 103 68.9
TAR623G1689 Trochodendron aralioides HOM05D003642 ORTHO05D004460 3.2e-34 149.1 83 84.3
CiPaw.13G137400 Carya illinoinensis HOM05D003642 ORTHO05D004460 4.2e-34 148.7 98 74.5
VMungo1127G0822 Vigna mungo HOM05D003642 ORTHO05D004460 4.2e-34 148.7 94 73.4
CARHR008130 Cardamine hirsuta HOM05D003642 ORTHO05D004460 5.5e-34 148.3 105 63.8
ClCG02G022190 Citrullus lanatus HOM05D003642 ORTHO05D004460 7.1e-34 147.9 94 73.4
Lsat_1_v5_gn_1_61681 Lactuca sativa HOM05D003642 ORTHO05D004460 7.1e-34 147.9 98 71.4
HPP92_006804 Vanilla planifolia HOM05D003642 ORTHO05D004460 7.1e-34 147.9 98 68.4
Cpa.g.sc32.97 Carica papaya HOM05D003642 ORTHO05D004460 9.3e-34 147.5 101 71.3
SMO145G0137 Selaginella moellendorffii HOM05D003642 ORTHO05D004460 9.3e-34 147.5 97 68.0
THA.LOC104826418 Tarenaya hassleriana HOM05D003642 ORTHO05D004460 9.3e-34 147.5 99 71.7
TAR369G0447 Trochodendron aralioides HOM05D003642 ORTHO05D004460 9.3e-34 147.5 99 70.7
Carub.0001s0763 Capsella rubella HOM05D003642 ORTHO05D004460 2.1e-33 146.4 105 62.9
Lj1A233T8 Lonicera japonica HOM05D003642 ORTHO05D004460 2.1e-33 146.4 98 72.4
HPP92_011490 Vanilla planifolia HOM05D003642 ORTHO05D004460 2.1e-33 146.4 101 67.3
Gohir.D08G015066 Gossypium hirsutum HOM05D003642 ORTHO05D004460 2.7e-33 146.0 99 66.7
Gorai.004G009500 Gossypium raimondii HOM05D003642 ORTHO05D004460 2.7e-33 146.0 99 66.7
Manes.04G004900 Manihot esculenta HOM05D003642 ORTHO05D004460 2.7e-33 146.0 101 68.3
Sabra09G0111700 Salix brachista HOM05D003642 ORTHO05D004460 3.5e-33 145.6 101 67.3
Sabra09G0114400 Salix brachista HOM05D003642 ORTHO05D004460 3.5e-33 145.6 101 67.3
AT1G08280 Arabidopsis thaliana HOM05D003642 ORTHO05D004460 6.0e-33 144.8 105 62.9
Migut.D02354 Erythranthe guttata HOM05D003642 ORTHO05D004460 6.0e-33 144.8 88 71.6
Glyma.12G088100 Glycine max HOM05D003642 ORTHO05D004460 6.0e-33 144.8 93 73.1
Zm00001eb147290 Zea mays HOM05D003642 ORTHO05D004460 6.0e-33 144.8 93 65.6
QL01p012516 Quercus lobata HOM05D003642 ORTHO05D004460 7.9e-33 144.4 98 68.4
SGA_v2.0_scaffold147G36369 Striga asiatica HOM05D003642 ORTHO05D004460 7.9e-33 144.4 88 75.0
ECA233G1545 Erigeron canadensis HOM05D003642 ORTHO05D004460 1.0e-32 144.1 98 68.4
Sp1g06910 Schrenkiella parvula HOM05D003642 ORTHO05D004460 1.0e-32 144.1 105 60.0
Actinidia24206 Actinidia chinensis HOM05D003642 ORTHO05D004460 1.3e-32 143.7 80 82.5
Ah.08g215830 Amaranthus hybridus HOM05D003642 ORTHO05D004460 1.3e-32 143.7 98 70.4
AL1G18680 Arabidopsis lyrata HOM05D003642 ORTHO05D004460 1.3e-32 143.7 105 61.9
arahy.Tifrunner.gnm1.ann1.SR1X9W Arachis hypogaea HOM05D003642 ORTHO05D004460 1.3e-32 143.7 94 71.3
Thhalv10007826m.g Eutrema salsugineum HOM05D003642 ORTHO05D004460 1.3e-32 143.7 105 61.0
Zm00001eb366950 Zea mays HOM05D003642 ORTHO05D004460 1.3e-32 143.7 93 64.5
Dinv29465 Davidia involucrata HOM05D003642 ORTHO05D004460 1.8e-32 143.3 79 82.3
SGA_v2.0_scaffold22G09875 Striga asiatica HOM05D003642 ORTHO05D004460 2.3e-32 142.9 94 69.1
vmacro03309 Vaccinium macrocarpon HOM05D003642 ORTHO05D004460 2.3e-32 142.9 101 67.3
Potri.009G144000 Populus trichocarpa HOM05D003642 ORTHO05D004460 3.0e-32 142.5 101 64.4
AUR62039222 Chenopodium quinoa HOM05D003642 ORTHO05D004460 3.9e-32 142.1 102 66.7
Cc01_g09370 Coffea canephora HOM05D003642 ORTHO05D004460 3.9e-32 142.1 101 66.3
BraA06t23738Z Brassica rapa HOM05D003642 ORTHO05D004460 5.1e-32 141.7 105 59.0
Oeu002383.1 Olea europaea HOM05D003642 ORTHO05D004460 5.1e-32 141.7 94 66.0
EL10Ac7g15808 Beta vulgaris HOM05D003642 ORTHO05D004460 8.7e-32 141.0 98 67.3
DCAR_012184 Daucus carota HOM05D003642 ORTHO05D004460 1.1e-31 140.6 97 66.0
FAN11G1888 Fragaria x ananassa HOM05D003642 ORTHO05D004460 1.1e-31 140.6 82 76.8
Gohir.A08G004800 Gossypium hirsutum HOM05D003642 ORTHO05D004460 1.1e-31 140.6 99 64.6
Lsat_1_v5_gn_6_40461 Lactuca sativa HOM05D003642 ORTHO05D004460 1.1e-31 140.6 98 67.3
A06p05300 Brassica napus HOM05D003642 ORTHO05D004460 1.5e-31 140.2 105 58.1
BcaB07g34071 Brassica carinata HOM05D003642 ORTHO05D004460 1.9e-31 139.8 105 59.0
C05p06380 Brassica napus HOM05D003642 ORTHO05D004460 1.9e-31 139.8 105 59.0
FvH4_3g24660 Fragaria vesca HOM05D003642 ORTHO05D004460 1.9e-31 139.8 80 78.8
Os01g0858900 Oryza sativa ssp. japonica HOM05D003642 ORTHO05D004460 1.9e-31 139.8 93 61.3
BcaB07g34070 Brassica carinata HOM05D003642 ORTHO05D004460 2.5e-31 139.4 105 58.1
AUR62009777 Chenopodium quinoa HOM05D003642 ORTHO05D004460 2.5e-31 139.4 102 64.7
HanXRQChr12g0364601 Helianthus annuus HOM05D003642 ORTHO05D004460 3.3e-31 139.0 97 69.1
BolC5t29393H Brassica oleracea HOM05D003642 ORTHO05D004460 5.7e-31 138.3 105 58.1
Eucgr.B03871 Eucalyptus grandis HOM05D003642 ORTHO05D004460 1.3e-30 137.1 88 70.5
Eucgr.B03872 Eucalyptus grandis HOM05D003642 ORTHO05D004460 1.3e-30 137.1 98 65.3
vmacro03308 Vaccinium macrocarpon HOM05D003642 ORTHO05D004460 2.8e-30 136.0 101 65.3
unitig_746.g26606 Utricularia gibba HOM05D003642 ORTHO05D004460 4.8e-30 135.2 99 62.6
Zm00001eb426190 Zea mays HOM05D003642 ORTHO05D004460 8.2e-30 134.4 98 57.1
arahy.Tifrunner.gnm1.ann1.H74NZW Arachis hypogaea HOM05D003642 ORTHO05D004460 1.1e-29 134.0 95 64.2
Sc12g0004420 Simmondsia chinensis HOM05D003642 ORTHO05D004460 1.4e-29 133.7 103 58.3
unitig_0.g1479 Utricularia gibba HOM05D003642 ORTHO05D004460 1.4e-29 133.7 96 66.7
Zm00001eb077930 Zea mays HOM05D003642 ORTHO05D004460 1.8e-29 133.3 98 58.2
Zm00001eb196980 Zea mays HOM05D003642 ORTHO05D004460 1.8e-29 133.3 98 61.2
Glyma.12G088000 Glycine max HOM05D003642 ORTHO05D004460 2.4e-29 132.9 92 67.4
CSS0018533 Camellia sinensis var. sinensis HOM05D003642 ORTHO05D004460 3.1e-29 132.5 94 69.1
SMO331G0026 Selaginella moellendorffii HOM05D003642 ORTHO05D004460 4.1e-29 132.1 95 66.3
Os04g0506800 Oryza sativa ssp. japonica HOM05D003642 ORTHO05D004460 5.3e-29 131.7 100 58.0
HPP92_025134 Vanilla planifolia HOM05D003642 ORTHO05D004460 5.3e-29 131.7 80 77.5
HPP92_026090 Vanilla planifolia HOM05D003642 ORTHO05D004460 5.3e-29 131.7 80 77.5
TWI75G1212 Tripterygium wilfordii HOM05D003642 ORTHO05D004460 9.0e-29 131.0 101 62.4
vmacro03307 Vaccinium macrocarpon HOM05D003642 ORTHO05D004460 2.6e-28 129.4 108 60.2
Rhsim13G0110200 Rhododendron simsii HOM05D003642 ORTHO05D004460 4.5e-28 128.6 111 58.6
MSTRG.18752 Avicennia marina HOM05D003642 ORTHO05D004460 1.0e-27 127.5 79 70.9
SalBow6G1534 Salvia bowleyana HOM05D003642 ORTHO05D004460 1.3e-27 127.1 98 62.2
Os12g0151500 Oryza sativa ssp. japonica HOM05D003642 ORTHO05D004460 1.7e-27 126.7 93 63.4
AagrBONN_evm.TU.Sc2ySwM_228.2668 Anthoceros agrestis HOM05D003642 ORTHO05D004460 6.5e-27 124.8 98 58.2
CSS0027733 Camellia sinensis var. sinensis HOM05D003642 ORTHO05D004460 1.4e-26 123.6 94 64.9
CSS0037628 Camellia sinensis var. sinensis HOM05D003642 ORTHO05D004460 1.4e-26 123.6 94 64.9
unitig_899.g15371 Utricularia gibba HOM05D003642 ORTHO05D004460 1.4e-26 123.6 98 60.2
Mapoly0005s0249 Marchantia polymorpha HOM05D003642 ORTHO05D004460 4.2e-26 122.1 103 56.3
Mapoly0001s0264 Marchantia polymorpha HOM05D003642 ORTHO05D004460 7.2e-26 121.3 101 58.4
Lj1A242T18 Lonicera japonica HOM05D003642 ORTHO05D004460 2.7e-25 119.4 75 74.7
arahy.Tifrunner.gnm1.ann1.52W323 Arachis hypogaea HOM05D003642 ORTHO05D004460 8.7e-24 114.4 94 58.5
Zm00001eb092710 Zea mays HOM05D003642 ORTHO05D004460 1.1e-23 114.0 100 53.0
CiPaw.14G101500 Carya illinoinensis HOM05D003642 ORTHO05D004460 5.7e-23 111.7 71 74.6
GSVIVG01036150001 Vitis vinifera HOM05D003642 ORTHO05D004460 2.8e-22 109.4 76 71.1
Pp3c14_26500 Physcomitrium patens HOM05D003642 ORTHO05D004460 4.8e-22 108.6 111 49.5
arahy.Tifrunner.gnm1.ann1.GDD8RQ Arachis hypogaea HOM05D003642 ORTHO05D004460 1.1e-21 107.5 94 55.3
Lj2C980T3 Lonicera japonica HOM05D003642 ORTHO05D004460 3.4e-20 102.4 75 66.7
Mapoly0028s0144 Marchantia polymorpha HOM05D003642 ORTHO05D004460 5.0e-19 98.6 105 43.8
Mapoly0032s0065 Marchantia polymorpha HOM05D003642 ORTHO05D004460 3.0e-16 89.4 93 47.3
CDE08G1668 Ceratophyllum demersum HOM05D003642 ORTHO05D003759 1.3e-14 84.0 94 43.6
Pp3c6_3550 Physcomitrium patens HOM05D003642 ORTHO05D004460 8.5e-11 71.2 62 53.2
Lalb_Chr19g0136571 Lupinus albus HOM05D003642 ORTHO05D004460 1.0e-08 64.3 35 82.9
CAN.G225.12 Capsicum annuum HOM05D003642 ORTHO05D004460 4.4e-07 58.9 42 66.7
CBR_g16841 Chara braunii HOM05D003642 ORTHO05D004460 9.7e-07 57.8 99 30.3


User provided reference genes

Program Settings