Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0770 Ceratophyllum demersum HOM05D001186 ORTHO05D000971 3.3e-120 435.3 250 100.0
CDE04G3497 Ceratophyllum demersum HOM05D001186 ORTHO05D000971 1.3e-68 263.8 191 77.0
TAR371G0320 Trochodendron aralioides HOM05D001186 ORTHO05D000971 1.2e-18 97.8 193 40.4
TAR629G3519 Trochodendron aralioides HOM05D001186 ORTHO05D000971 2.8e-15 86.7 198 35.4
COL.COLO4_07638 Corchorus olitorius HOM05D001186 ORTHO05D000971 2.0e-13 80.5 186 36.0
Thecc.02G227800 Theobroma cacao HOM05D001186 ORTHO05D000971 3.5e-13 79.7 192 37.0
Cc11_g10020 Coffea canephora HOM05D001186 ORTHO05D000971 1.7e-12 77.4 186 33.3
Manes.06G067000 Manihot esculenta HOM05D001186 ORTHO05D000971 2.9e-12 76.6 169 36.7
Dinv31630 Davidia involucrata HOM05D001186 ORTHO05D000971 3.8e-12 76.3 157 38.9
CSS0012233 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 1.2e-10 71.2 199 34.7
Lalb_Chr06g0166031 Lupinus albus HOM05D001186 ORTHO05D000971 1.6e-10 70.9 176 39.2
Nitab4.5_0000489g0090 Nicotiana tabacum HOM05D001186 ORTHO05D000971 2.1e-10 70.5 155 38.1
TWI31G0680 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 2.1e-10 70.5 151 35.8
Dinv21073 Davidia involucrata HOM05D001186 ORTHO05D000971 2.8e-10 70.1 157 36.9
Potri.010G123700 Populus trichocarpa HOM05D001186 ORTHO05D000971 2.8e-10 70.1 209 33.0
VMungo1215G0327 Vigna mungo HOM05D001186 ORTHO05D000971 2.8e-10 70.1 142 41.5
Nitab4.5_0001674g0050 Nicotiana tabacum HOM05D001186 ORTHO05D000971 3.6e-10 69.7 79 57.0
Lalb_Chr21g0308871 Lupinus albus HOM05D001186 ORTHO05D000971 1.4e-09 67.8 179 35.8
PGR119G2222 Punica granatum HOM05D001186 ORTHO05D000971 1.8e-09 67.4 187 33.2
QL10p025510 Quercus lobata HOM05D001186 ORTHO05D000971 3.0e-09 66.6 181 37.0
CiPaw.15G086400 Carya illinoinensis HOM05D001186 ORTHO05D000971 4.0e-09 66.2 186 33.3
Glyma.10G273300 Glycine max HOM05D001186 ORTHO05D000971 5.2e-09 65.9 163 35.6
Atru.chr11.114 Acer truncatum HOM05D001186 ORTHO05D000971 6.8e-09 65.5 161 32.9
Manes.14G103400 Manihot esculenta HOM05D001186 ORTHO05D000971 6.8e-09 65.5 205 35.1
SGA_v2.0_scaffold38G14938 Striga asiatica HOM05D001186 ORTHO05D000971 8.8e-09 65.1 155 36.1
VMungo0464G1252 Vigna mungo HOM05D001186 ORTHO05D000971 1.2e-08 64.7 106 39.6
CANSAT01G1945 Cannabis sativa HOM05D001186 ORTHO05D000971 1.5e-08 64.3 92 45.7
Cpa.g.sc3.505 Carica papaya HOM05D001186 ORTHO05D000971 1.5e-08 64.3 102 44.1
HanXRQChr12g0364621 Helianthus annuus HOM05D001186 ORTHO05D000971 1.5e-08 64.3 149 37.6
HanXRQChr12g0364631 Helianthus annuus HOM05D001186 ORTHO05D000971 1.5e-08 64.3 151 37.1
Lsat_1_v5_gn_8_40921 Lactuca sativa HOM05D001186 ORTHO05D000971 2.0e-08 63.9 156 34.0
Phvul.003G030601 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 2.0e-08 63.9 177 33.3
QL02p024757 Quercus lobata HOM05D001186 ORTHO05D000971 2.0e-08 63.9 91 42.9
Duzib268G0437 Durio zibethinus HOM05D001186 ORTHO05D000971 2.6e-08 63.5 203 33.5
Hma1.2p1_0061F.1_g033760 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 2.6e-08 63.5 154 35.7
TWI79G1623 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 3.4e-08 63.2 97 48.5
arahy.Tifrunner.gnm1.ann1.MZ5XB8 Arachis hypogaea HOM05D001186 ORTHO05D000971 4.4e-08 62.8 91 46.2
MBI09_g40766_MAGBIO Magnolia biondii HOM05D001186 ORTHO05D000971 4.4e-08 62.8 198 34.3
MD16G1041600 Malus domestica HOM05D001186 ORTHO05D000971 4.4e-08 62.8 77 46.8
QL01p041179 Quercus lobata HOM05D001186 ORTHO05D000971 4.4e-08 62.8 107 44.9
Oeu008243.1 Olea europaea HOM05D001186 ORTHO05D000971 5.7e-08 62.4 191 35.6
Phvul.007G028200 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 5.7e-08 62.4 156 35.9
Potri.002G070600 Populus trichocarpa HOM05D001186 ORTHO05D000971 5.7e-08 62.4 83 42.2
MSTRG.847 Avicennia marina HOM05D001186 ORTHO05D000971 9.8e-08 61.6 205 33.2
Rhsim09G0107000 Rhododendron simsii HOM05D001186 ORTHO05D000971 9.8e-08 61.6 157 31.8
Dinv28111 Davidia involucrata HOM05D001186 ORTHO05D000971 1.3e-07 61.2 206 33.0
Lj2g0018313 Lotus japonicus HOM05D001186 ORTHO05D000971 1.3e-07 61.2 173 35.8
Sabra02G0055300 Salix brachista HOM05D001186 ORTHO05D000971 1.3e-07 61.2 78 43.6
Lalb_Chr04g0254691 Lupinus albus HOM05D001186 ORTHO05D000971 1.7e-07 60.8 181 37.6
Aqoxy3G00278 Aquilegia oxysepala HOM05D001186 ORTHO05D000971 2.8e-07 60.1 207 31.4
Haze_18687 Corylus avellana HOM05D001186 ORTHO05D000971 2.8e-07 60.1 102 40.2
Gohir.A05G321500 Gossypium hirsutum HOM05D001186 ORTHO05D000971 2.8e-07 60.1 159 34.6
Gohir.D05G323700 Gossypium hirsutum HOM05D001186 ORTHO05D000971 2.8e-07 60.1 147 35.4
Manes.02G176600 Manihot esculenta HOM05D001186 ORTHO05D000971 2.8e-07 60.1 76 43.4
Cpa.g.c39771 Carica papaya HOM05D001186 ORTHO05D000971 3.7e-07 59.7 113 41.6
Nn3g17865 Nelumbo nucifera HOM05D001186 ORTHO05D000971 3.7e-07 59.7 136 36.8
Potri.015G046600 Populus trichocarpa HOM05D001186 ORTHO05D000971 3.7e-07 59.7 103 40.8
QL01p041163 Quercus lobata HOM05D001186 ORTHO05D000971 3.7e-07 59.7 187 34.2
ATR0772G190 Amborella trichopoda HOM05D001186 ORTHO05D000971 4.9e-07 59.3 102 39.2
BcaC09g48794 Brassica carinata HOM05D001186 ORTHO05D000971 4.9e-07 59.3 79 46.8
A01p35980 Brassica napus HOM05D001186 ORTHO05D000971 4.9e-07 59.3 79 46.8
C01p45850 Brassica napus HOM05D001186 ORTHO05D000971 4.9e-07 59.3 79 46.8
BolC1t04547H Brassica oleracea HOM05D001186 ORTHO05D000971 4.9e-07 59.3 79 46.8
BraA01t03679Z Brassica rapa HOM05D001186 ORTHO05D000971 4.9e-07 59.3 79 46.8
Gorai.009G347500 Gossypium raimondii HOM05D001186 ORTHO05D000971 6.3e-07 58.9 147 35.4
Haze_17495 Corylus avellana HOM05D001186 ORTHO05D000971 8.3e-07 58.5 88 44.3
FAN07G0491 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.4e-06 57.8 86 44.2
Nitab4.5_0002906g0010 Nicotiana tabacum HOM05D001186 ORTHO05D000971 1.8e-06 57.4 85 45.9
PSO675G0766 Papaver somniferum HOM05D001186 ORTHO05D000971 1.8e-06 57.4 88 40.9
SalBow8G5321 Salvia bowleyana HOM05D001186 ORTHO05D000971 1.8e-06 57.4 190 30.0
Nn4g23866 Nelumbo nucifera HOM05D001186 ORTHO05D000971 2.4e-06 57.0 214 31.3
Cfa019761 Carpinus fangiana HOM05D001186 ORTHO05D000971 3.1e-06 56.6 106 40.6
COL.COLO4_03433 Corchorus olitorius HOM05D001186 ORTHO05D000971 3.1e-06 56.6 84 42.9
FAN22G0160 Fragaria x ananassa HOM05D001186 ORTHO05D000971 3.1e-06 56.6 86 43.0
Potri.005G189300 Populus trichocarpa HOM05D001186 ORTHO05D000971 3.1e-06 56.6 98 38.8
unitig_22.g6558 Utricularia gibba HOM05D001186 ORTHO05D000971 3.1e-06 56.6 147 35.4
Lj5g0015241 Lotus japonicus HOM05D001186 ORTHO05D000971 4.1e-06 56.2 180 32.8
C02p24610 Brassica napus HOM05D001186 ORTHO05D000971 5.4e-06 55.8 106 34.9
Cfa018343 Carpinus fangiana HOM05D001186 ORTHO05D000971 5.4e-06 55.8 79 45.6
CiPaw.16G065400 Carya illinoinensis HOM05D001186 ORTHO05D000971 5.4e-06 55.8 208 33.7
ECA233G1982 Erigeron canadensis HOM05D001186 ORTHO05D000971 5.4e-06 55.8 159 30.8
Oeu001004.1 Olea europaea HOM05D001186 ORTHO05D000971 5.4e-06 55.8 183 35.0
Os08g0102900 Oryza sativa ssp. japonica HOM05D001186 ORTHO05D000971 5.4e-06 55.8 75 38.7
RcHm_v2.0_Chr2g0120181 Rosa chinensis HOM05D001186 ORTHO05D000971 5.4e-06 55.8 76 39.5
TPR.G15166 Trifolium pratense HOM05D001186 ORTHO05D000971 5.4e-06 55.8 107 38.3
BcaB05g24382 Brassica carinata HOM05D001186 ORTHO05D000971 7.0e-06 55.5 106 36.8
DCAR_023208 Daucus carota HOM05D001186 ORTHO05D000971 7.0e-06 55.5 155 37.4
Duzib084G0272 Durio zibethinus HOM05D001186 ORTHO05D000971 7.0e-06 55.5 102 41.2
Manes.18G089366 Manihot esculenta HOM05D001186 ORTHO05D000971 7.0e-06 55.5 100 37.0
Medtr6g084200 Medicago truncatula HOM05D001186 ORTHO05D000971 7.0e-06 55.5 103 38.8
PSO541G6297 Papaver somniferum HOM05D001186 ORTHO05D000971 7.0e-06 55.5 95 38.9
PSO675G7373 Papaver somniferum HOM05D001186 ORTHO05D000971 7.0e-06 55.5 94 39.4
HPP92_027454 Vanilla planifolia HOM05D001186 ORTHO05D000971 7.0e-06 55.5 96 38.5
EL10Ac1g01490 Beta vulgaris HOM05D001186 ORTHO05D000971 9.2e-06 55.1 74 40.5
MELO3C010713.2 Cucumis melo HOM05D001186 ORTHO05D000971 9.2e-06 55.1 124 37.1
Gorai.004G112000 Gossypium raimondii HOM05D001186 ORTHO05D000971 9.2e-06 55.1 80 42.5
Oeu034232.1 Olea europaea HOM05D001186 ORTHO05D000971 9.2e-06 55.1 182 30.2
Rhsim08G0003200 Rhododendron simsii HOM05D001186 ORTHO05D000971 9.2e-06 55.1 98 37.8


User provided reference genes

Program Settings