Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0700 Ceratophyllum demersum HOM05D003176 ORTHO05D004011 1.1e-195 686.4 353 100.0
CDE02G1474 Ceratophyllum demersum HOM05D003176 ORTHO05D004011 8.6e-159 563.9 350 86.6
TAR625G0715 Trochodendron aralioides HOM05D003176 ORTHO05D004011 1.4e-44 184.5 427 35.4
Sabra18G0116900 Salix brachista HOM05D003176 ORTHO05D004011 8.6e-42 175.3 401 36.7
MBI13_g01740_MAGBIO Magnolia biondii HOM05D003176 ORTHO05D004011 9.5e-41 171.8 432 35.2
Potri.018G143100 Populus trichocarpa HOM05D003176 ORTHO05D004011 6.1e-40 169.1 402 35.6
Potri.006G076000 Populus trichocarpa HOM05D003176 ORTHO05D004011 6.8e-39 165.6 427 34.2
ClCG11G011790 Citrullus lanatus HOM05D003176 ORTHO05D004011 1.2e-38 164.9 411 35.5
CANSAT11G0358 Cannabis sativa HOM05D003176 ORTHO05D004011 2.6e-38 163.7 419 36.5
Cfa013447 Carpinus fangiana HOM05D003176 ORTHO05D004011 2.6e-38 163.7 410 35.1
CsaV3_2G008700 Cucumis sativus L. HOM05D003176 ORTHO05D004011 2.6e-38 163.7 412 35.7
Dinv41170 Davidia involucrata HOM05D003176 ORTHO05D004011 2.6e-38 163.7 421 35.9
MD16G1249600 Malus domestica HOM05D003176 ORTHO05D004011 7.5e-38 162.2 408 35.0
QL02p046513 Quercus lobata HOM05D003176 ORTHO05D004011 1.7e-37 161.0 421 34.9
MELO3C003977.2 Cucumis melo HOM05D003176 ORTHO05D004011 2.2e-37 160.6 414 35.7
Sabra06G0056800 Salix brachista HOM05D003176 ORTHO05D004011 2.2e-37 160.6 418 34.4
SGA_v2.0_scaffold31G12758 Striga asiatica HOM05D003176 ORTHO05D004011 2.2e-37 160.6 385 34.5
Ciclev10007458m.g Citrus clementina HOM05D003176 ORTHO05D004011 2.9e-37 160.2 412 34.2
FAN12G1948 Fragaria x ananassa HOM05D003176 ORTHO05D004011 2.9e-37 160.2 418 35.2
Prupe.1G076400 Prunus persica HOM05D003176 ORTHO05D004011 2.9e-37 160.2 411 36.3
TWI63G0043 Tripterygium wilfordii HOM05D003176 ORTHO05D004011 6.4e-37 159.1 438 32.9
arahy.Tifrunner.gnm1.ann1.LRN56Y Arachis hypogaea HOM05D003176 ORTHO05D004011 1.4e-36 157.9 430 32.1
arahy.Tifrunner.gnm1.ann1.LHRZ75 Arachis hypogaea HOM05D003176 ORTHO05D004011 2.4e-36 157.1 430 32.1
Duzib150G0644 Durio zibethinus HOM05D003176 ORTHO05D004011 2.4e-36 157.1 416 32.9
Manes.06G020300 Manihot esculenta HOM05D003176 ORTHO05D004011 2.4e-36 157.1 412 34.2
Aqoxy7G02785 Aquilegia oxysepala HOM05D003176 ORTHO05D004011 4.1e-36 156.4 422 35.8
TWI32G0804 Tripterygium wilfordii HOM05D003176 ORTHO05D004011 4.1e-36 156.4 441 32.4
COL.COLO4_08418 Corchorus olitorius HOM05D003176 ORTHO05D004011 5.4e-36 156.0 414 35.3
Thecc.09G185500 Theobroma cacao HOM05D003176 ORTHO05D004011 5.4e-36 156.0 418 34.0
CiPaw.07G196500 Carya illinoinensis HOM05D003176 ORTHO05D004011 1.2e-35 154.8 413 33.7
Ca_21252_v3 Cicer arietinum L. HOM05D003176 ORTHO05D004011 1.2e-35 154.8 417 33.6
Duzib168G1099 Durio zibethinus HOM05D003176 ORTHO05D004011 1.2e-35 154.8 417 34.3
ATR0626G188 Amborella trichopoda HOM05D003176 ORTHO05D004011 1.6e-35 154.5 416 34.1
Dinv25436 Davidia involucrata HOM05D003176 ORTHO05D004011 1.6e-35 154.5 418 34.7
Sed0013378 Sechium edule HOM05D003176 ORTHO05D004011 1.6e-35 154.5 421 34.0
SGA_v2.0_scaffold491G52431 Striga asiatica HOM05D003176 ORTHO05D004011 1.6e-35 154.5 398 35.2
FAN17G1758 Fragaria x ananassa HOM05D003176 ORTHO05D004011 2.0e-35 154.1 419 34.6
Nitab4.5_0000617g0010 Nicotiana tabacum HOM05D003176 ORTHO05D004011 2.7e-35 153.7 416 34.1
RcHm_v2.0_Chr4g0399721 Rosa chinensis HOM05D003176 ORTHO05D004011 2.7e-35 153.7 423 34.8
MD13G1242400 Malus domestica HOM05D003176 ORTHO05D004011 3.5e-35 153.3 417 35.5
CSS0011174 Camellia sinensis var. sinensis HOM05D003176 ORTHO05D004011 4.6e-35 152.9 427 33.3
PSO063G3607 Papaver somniferum HOM05D003176 ORTHO05D004011 1.0e-34 151.8 423 32.2
Haze_22014 Corylus avellana HOM05D003176 ORTHO05D004011 1.3e-34 151.4 432 32.6
Manes.14G157900 Manihot esculenta HOM05D003176 ORTHO05D004011 1.3e-34 151.4 412 34.2
Nitab4.5_0003468g0010 Nicotiana tabacum HOM05D003176 ORTHO05D004011 1.3e-34 151.4 416 34.1
PSO170G4191 Papaver somniferum HOM05D003176 ORTHO05D004011 1.3e-34 151.4 403 33.5
CAN.G333.10 Capsicum annuum HOM05D003176 ORTHO05D004011 3.0e-34 150.2 421 33.7
Eucgr.C00121 Eucalyptus grandis HOM05D003176 ORTHO05D004011 3.9e-34 149.8 420 31.7
FAN07G0459 Fragaria x ananassa HOM05D003176 ORTHO05D004011 3.9e-34 149.8 414 33.6
FAN22G0108 Fragaria x ananassa HOM05D003176 ORTHO05D004011 3.9e-34 149.8 431 34.3
MBI16_g05838_MAGBIO Magnolia biondii HOM05D003176 ORTHO05D004011 5.0e-34 149.4 414 32.4
Gohir.A08G080400 Gossypium hirsutum HOM05D003176 ORTHO05D004011 8.6e-34 148.7 419 32.9
Phvul.003G141700 Phaseolus vulgaris HOM05D003176 ORTHO05D004011 8.6e-34 148.7 422 32.9
Atru.chr7.764 Acer truncatum HOM05D003176 ORTHO05D004011 1.1e-33 148.3 413 32.9
Atru.chr7.784 Acer truncatum HOM05D003176 ORTHO05D004011 1.1e-33 148.3 413 32.9
Sed0012562 Sechium edule HOM05D003176 ORTHO05D004011 1.9e-33 147.5 418 33.0
THA.LOC104814653 Tarenaya hassleriana HOM05D003176 ORTHO05D004011 1.9e-33 147.5 432 31.0
Solyc07g008840.3 Solanum lycopersicum HOM05D003176 ORTHO05D004011 2.5e-33 147.1 428 32.7
Sopen07g004770 Solanum pennellii HOM05D003176 ORTHO05D004011 3.3e-33 146.7 420 32.4
FvH4_4g07350 Fragaria vesca HOM05D003176 ORTHO05D004011 4.3e-33 146.4 414 33.6
Actinidia02504 Actinidia chinensis HOM05D003176 ORTHO05D004011 5.6e-33 146.0 443 33.0
Migut.J00803 Erythranthe guttata HOM05D003176 ORTHO05D004011 5.6e-33 146.0 401 32.9
PGR142G3732 Punica granatum HOM05D003176 ORTHO05D004011 7.3e-33 145.6 409 32.0
EL10Ac8g18330 Beta vulgaris HOM05D003176 ORTHO05D004011 1.2e-32 144.8 424 34.4
Medtr2g037930 Medicago truncatula HOM05D003176 ORTHO05D004011 1.2e-32 144.8 469 30.1
THA.LOC104820008 Tarenaya hassleriana HOM05D003176 ORTHO05D004011 1.6e-32 144.4 416 31.5
Gohir.D08G090300 Gossypium hirsutum HOM05D003176 ORTHO05D004011 2.1e-32 144.1 419 32.0
Lalb_Chr23g0276801 Lupinus albus HOM05D003176 ORTHO05D004011 2.1e-32 144.1 417 31.4
Cc00_g10750 Coffea canephora HOM05D003176 ORTHO05D004011 2.8e-32 143.7 400 33.5
Gorai.004G095300 Gossypium raimondii HOM05D003176 ORTHO05D004011 3.6e-32 143.3 419 31.7
Peaxi162Scf01600g00024 Petunia axillaris HOM05D003176 ORTHO05D004011 3.6e-32 143.3 413 34.1
Hund26312 Selenicereus undatus HOM05D003176 ORTHO05D004011 3.6e-32 143.3 397 33.0
AUR62021345 Chenopodium quinoa HOM05D003176 ORTHO05D004011 4.7e-32 142.9 423 31.9
AUR62033259 Chenopodium quinoa HOM05D003176 ORTHO05D004011 8.0e-32 142.1 423 32.4
vmacro20819 Vaccinium macrocarpon HOM05D003176 ORTHO05D004011 8.0e-32 142.1 418 34.2
VMungo1215G3277 Vigna mungo HOM05D003176 ORTHO05D004011 8.0e-32 142.1 420 31.0
CSS0035242 Camellia sinensis var. sinensis HOM05D003176 ORTHO05D004011 1.1e-31 141.7 398 32.9
GSVIVG01010868001 Vitis vinifera HOM05D003176 ORTHO05D004011 1.1e-31 141.7 350 34.9
Duzib170G0992 Durio zibethinus HOM05D003176 ORTHO05D004011 1.4e-31 141.4 411 32.1
Rhsim01G0118100 Rhododendron simsii HOM05D003176 ORTHO05D004011 1.4e-31 141.4 417 31.2
SalBow3G1319 Salvia bowleyana HOM05D003176 ORTHO05D004011 1.4e-31 141.4 430 31.2
Lj6g0011356 Lotus japonicus HOM05D003176 ORTHO05D004011 2.3e-31 140.6 477 28.3
PGR044G1774 Punica granatum HOM05D003176 ORTHO05D004011 2.3e-31 140.6 476 30.0
Glyma.13G100200 Glycine max HOM05D003176 ORTHO05D004011 4.0e-31 139.8 442 31.0
Oeu064554.1 Olea europaea HOM05D003176 ORTHO05D004011 5.2e-31 139.4 396 33.1
Medtr4g127450 Medicago truncatula HOM05D003176 ORTHO05D004011 8.9e-31 138.7 420 32.6
TPR.G7915 Trifolium pratense HOM05D003176 ORTHO05D004011 8.9e-31 138.7 459 28.5
Ca_02099_v3 Cicer arietinum L. HOM05D003176 ORTHO05D004011 4.4e-30 136.3 434 29.5
Psat4g013240 Pisum sativum HOM05D003176 ORTHO05D004011 1.3e-29 134.8 418 32.3
HPP92_010793 Vanilla planifolia HOM05D003176 ORTHO05D004011 1.3e-29 134.8 387 32.0
PGSC0003DMG400028746 Solanum tuberosum HOM05D003176 ORTHO05D004011 3.7e-29 133.3 398 31.7
CSS0006331 Camellia sinensis var. sinensis HOM05D003176 ORTHO05D004011 6.4e-29 132.5 448 31.7
CiPaw.08G033000 Carya illinoinensis HOM05D003176 ORTHO05D004011 6.4e-29 132.5 338 35.2
Lalb_Chr07g0180631 Lupinus albus HOM05D003176 ORTHO05D004011 6.4e-29 132.5 393 31.0
Lalb_Chr12g0199591 Lupinus albus HOM05D003176 ORTHO05D004011 6.4e-29 132.5 406 28.8
VMungo1309G1566 Vigna mungo HOM05D003176 ORTHO05D004011 8.3e-29 132.1 470 28.5
Ah.14g083560 Amaranthus hybridus HOM05D003176 ORTHO05D004011 1.1e-28 131.7 416 31.5
Oeu044676.1 Olea europaea HOM05D003176 ORTHO05D004011 1.1e-28 131.7 347 32.9
Migut.L01886 Erythranthe guttata HOM05D003176 ORTHO05D004011 1.4e-28 131.3 354 34.7
MSTRG.26541 Avicennia marina HOM05D003176 ORTHO05D004011 1.9e-28 131.0 410 30.5
Peaxi162Scf00124g00614 Petunia axillaris HOM05D003176 ORTHO05D004011 3.2e-28 130.2 412 32.3
DCAR_019802 Daucus carota HOM05D003176 ORTHO05D004011 4.1e-28 129.8 445 30.8
Sp7g27760 Schrenkiella parvula HOM05D003176 ORTHO05D004011 4.1e-28 129.8 422 30.1
HPP92_017388 Vanilla planifolia HOM05D003176 ORTHO05D004011 7.0e-28 129.0 380 32.6
Glyma.15G165500 Glycine max HOM05D003176 ORTHO05D004011 9.2e-28 128.6 468 29.1
CARHR237870 Cardamine hirsuta HOM05D003176 ORTHO05D004011 1.2e-27 128.3 429 29.8
Glyma.17G059700 Glycine max HOM05D003176 ORTHO05D004011 1.2e-27 128.3 317 35.0
Lj5A672T28 Lonicera japonica HOM05D003176 ORTHO05D004011 1.2e-27 128.3 420 31.7
Gohir.D13G213200 Gossypium hirsutum HOM05D003176 ORTHO05D004011 2.0e-27 127.5 422 31.0
Gorai.013G243500 Gossypium raimondii HOM05D003176 ORTHO05D004011 2.0e-27 127.5 422 31.0
PGSC0003DMG400023179 Solanum tuberosum HOM05D003176 ORTHO05D004011 2.7e-27 127.1 399 32.6
Carub.0007s1069 Capsella rubella HOM05D003176 ORTHO05D004011 3.5e-27 126.7 426 32.2
Lj4g0019846 Lotus japonicus HOM05D003176 ORTHO05D004011 4.6e-27 126.3 413 30.8
arahy.Tifrunner.gnm1.ann1.06L84B Arachis hypogaea HOM05D003176 ORTHO05D004011 1.3e-26 124.8 397 31.7
Cpa.g.c27842.3 Carica papaya HOM05D003176 ORTHO05D004011 1.7e-26 124.4 410 30.2
Lalb_Chr08g0231881 Lupinus albus HOM05D003176 ORTHO05D004011 3.0e-26 123.6 385 30.9
Oeu044677.1 Olea europaea HOM05D003176 ORTHO05D004011 3.9e-26 123.2 375 30.1
HPP92_017123 Vanilla planifolia HOM05D003176 ORTHO05D004011 6.6e-26 122.5 387 31.0
Zm00001eb035750 Zea mays HOM05D003176 ORTHO05D004011 1.1e-25 121.7 441 29.0
Solyc02g014450.3 Solanum lycopersicum HOM05D003176 ORTHO05D004011 2.5e-25 120.6 401 32.7
Gohir.A13G208800 Gossypium hirsutum HOM05D003176 ORTHO05D004011 3.3e-25 120.2 420 31.2
arahy.Tifrunner.gnm1.ann1.DF4URC Arachis hypogaea HOM05D003176 ORTHO05D004011 5.6e-25 119.4 399 31.6
Oeu006849.1 Olea europaea HOM05D003176 ORTHO05D004011 7.3e-25 119.0 402 33.1
ECA240G0293 Erigeron canadensis HOM05D003176 ORTHO05D004011 1.2e-24 118.2 394 30.5
Aa31LG3G13110 Aethionema arabicum HOM05D003176 ORTHO05D004011 2.1e-24 117.5 353 32.6
Carub.0003s3347 Capsella rubella HOM05D003176 ORTHO05D004011 2.1e-24 117.5 388 29.4
HanXRQChr03g0068441 Helianthus annuus HOM05D003176 ORTHO05D004011 3.6e-24 116.7 411 29.7
Os08g0518100 Oryza sativa ssp. japonica HOM05D003176 ORTHO05D004011 6.2e-24 115.9 451 29.5
SalBow5G0408 Salvia bowleyana HOM05D003176 ORTHO05D004011 8.1e-24 115.5 391 30.7
TPR.G35076 Trifolium pratense HOM05D003176 ORTHO05D004011 8.1e-24 115.5 313 33.9
AL7G22290 Arabidopsis lyrata HOM05D003176 ORTHO05D004011 1.1e-23 115.2 429 28.0
Sopen02g003110 Solanum pennellii HOM05D003176 ORTHO05D004011 1.1e-23 115.2 401 32.4
Nn8g40842 Nelumbo nucifera HOM05D003176 ORTHO05D004011 1.4e-23 114.8 115 53.9
BraA01t00762Z Brassica rapa HOM05D003176 ORTHO05D004011 2.3e-23 114.0 425 29.6
Aa31LG2G20600 Aethionema arabicum HOM05D003176 ORTHO05D004011 5.2e-23 112.8 403 29.0
Hund09057 Selenicereus undatus HOM05D003176 ORTHO05D004011 5.2e-23 112.8 476 28.8
AL8G33180 Arabidopsis lyrata HOM05D003176 ORTHO05D004011 6.8e-23 112.5 377 30.5
A01p08150 Brassica napus HOM05D003176 ORTHO05D004011 1.2e-22 111.7 425 29.9
Oeu018816.1 Olea europaea HOM05D003176 ORTHO05D004011 1.2e-22 111.7 328 31.7
THA.LOC104817780 Tarenaya hassleriana HOM05D003176 ORTHO05D004011 1.2e-22 111.7 379 31.4
C01p09120 Brassica napus HOM05D003176 ORTHO05D004011 1.5e-22 111.3 432 31.0
BolC1t00903H Brassica oleracea HOM05D003176 ORTHO05D004011 1.5e-22 111.3 432 31.0
Sc08g0004700 Simmondsia chinensis HOM05D003176 ORTHO05D004011 3.4e-22 110.2 395 30.9
AT4G29950 Arabidopsis thaliana HOM05D003176 ORTHO05D004011 4.4e-22 109.8 434 29.5
unitig_22.g5163 Utricularia gibba HOM05D003176 ORTHO05D004011 4.4e-22 109.8 349 31.2
AT5G57210 Arabidopsis thaliana HOM05D003176 ORTHO05D004011 5.8e-22 109.4 347 31.1
Thhalv10024395m.g Eutrema salsugineum HOM05D003176 ORTHO05D004011 5.8e-22 109.4 408 28.4
AT2G19240 Arabidopsis thaliana HOM05D003176 ORTHO05D004011 7.5e-22 109.0 423 29.1
Sp6g18940 Schrenkiella parvula HOM05D003176 ORTHO05D004011 7.5e-22 109.0 352 30.4
Glyma.09G059200 Glycine max HOM05D003176 ORTHO05D004011 1.3e-21 108.2 503 25.6
Phvul.009G236600 Phaseolus vulgaris HOM05D003176 ORTHO05D004011 1.3e-21 108.2 493 27.8
Carub.0008s1772 Capsella rubella HOM05D003176 ORTHO05D004011 3.7e-21 106.7 349 30.7
CARHR271000 Cardamine hirsuta HOM05D003176 ORTHO05D004011 8.3e-21 105.5 343 31.5
Psat1g145440 Pisum sativum HOM05D003176 ORTHO05D004011 8.3e-21 105.5 438 29.0
SGA_v2.0_scaffold231G43412 Striga asiatica HOM05D003176 ORTHO05D004011 8.3e-21 105.5 376 31.4
HanXRQChr10g0308831 Helianthus annuus HOM05D003176 ORTHO05D004011 1.9e-20 104.4 368 30.7
BcaC04g19989 Brassica carinata HOM05D003176 ORTHO05D004011 3.2e-20 103.6 386 28.5
C09p49040 Brassica napus HOM05D003176 ORTHO05D004011 4.1e-20 103.2 386 28.5
BcaB08g36083 Brassica carinata HOM05D003176 ORTHO05D004011 7.1e-20 102.4 376 28.5
Thhalv10012758m.g Eutrema salsugineum HOM05D003176 ORTHO05D004011 7.1e-20 102.4 313 31.9
HPP92_017117 Vanilla planifolia HOM05D003176 ORTHO05D004011 9.2e-20 102.1 331 32.0
Sp3g32610 Schrenkiella parvula HOM05D003176 ORTHO05D004011 2.7e-19 100.5 425 27.8
Lalb_Chr08g0231791 Lupinus albus HOM05D003176 ORTHO05D004011 3.5e-19 100.1 303 31.0
Os06g0661700 Oryza sativa ssp. japonica HOM05D003176 ORTHO05D004011 3.5e-19 100.1 363 29.5
CARHR109700 Cardamine hirsuta HOM05D003176 ORTHO05D004011 1.3e-18 98.2 104 51.9
A10p14610 Brassica napus HOM05D003176 ORTHO05D004011 2.3e-18 97.4 351 29.3
Lsat_1_v5_gn_7_56381 Lactuca sativa HOM05D003176 ORTHO05D004011 2.3e-18 97.4 375 27.5
ECA234G0289 Erigeron canadensis HOM05D003176 ORTHO05D004011 3.0e-18 97.1 411 27.7
BolC9t57755H Brassica oleracea HOM05D003176 ORTHO05D004011 2.8e-16 90.5 349 28.1
Zm00001eb389150 Zea mays HOM05D003176 ORTHO05D004011 6.8e-15 85.9 361 28.0
BraA10t43547Z Brassica rapa HOM05D003176 ORTHO05D004011 8.9e-15 85.5 350 28.0
BolC7t40717H Brassica oleracea HOM05D003176 ORTHO05D004011 2.6e-14 84.0 90 54.4
HanXRQChr12g0358501 Helianthus annuus HOM05D003176 ORTHO05D004011 4.4e-14 83.2 150 40.7
Aa31LG8G16270 Aethionema arabicum HOM05D003176 ORTHO05D004011 1.3e-13 81.6 495 24.4
Actinidia01280 Actinidia chinensis HOM05D003176 ORTHO05D004011 6.6e-10 69.3 111 41.4
AL161U10040 Arabidopsis lyrata HOM05D003176 ORTHO05D004011 6.6e-10 69.3 206 31.1
C07p03190 Brassica napus HOM05D003176 ORTHO05D004011 1.5e-09 68.2 88 46.6
CDE05G3335 Ceratophyllum demersum HOM05D003176 ORTHO05D004011 7.3e-09 65.9 146 35.6
SEGI_22652 Sequoiadendron giganteum HOM05D003176 ORTHO05D004011 7.3e-09 65.9 51 62.7
Mapoly0002s0075 Marchantia polymorpha HOM05D003176 ORTHO05D004011 2.8e-08 63.9 247 27.5
SEGI_03285 Sequoiadendron giganteum HOM05D003176 ORTHO05D004011 1.1e-07 62.0 179 31.3
BcaC09g51765 Brassica carinata HOM05D003176 ORTHO05D004011 4.4e-06 56.6 169 31.4


User provided reference genes

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