Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0653 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 1.9e-206 722.2 358 100.0
Nn1g08442 Nelumbo nucifera HOM05D004538 ORTHO05D006068 3.1e-164 582.0 357 77.0
TAR626G1654 Trochodendron aralioides HOM05D004538 ORTHO05D006068 2.6e-163 578.9 357 78.4
ATR0751G112 Amborella trichopoda HOM05D004538 ORTHO05D006068 5.8e-163 577.8 353 76.8
PSO541G6331 Papaver somniferum HOM05D004538 ORTHO05D006068 7.6e-163 577.4 354 77.7
MBI14_g30901_MAGBIO Magnolia biondii HOM05D004538 ORTHO05D006068 1.3e-162 576.6 357 77.0
Hund25422 Selenicereus undatus HOM05D004538 ORTHO05D006068 1.3e-162 576.6 357 75.9
PSO675G3744 Papaver somniferum HOM05D004538 ORTHO05D006068 2.9e-162 575.5 353 77.3
PSO063G5767 Papaver somniferum HOM05D004538 ORTHO05D006068 5.4e-161 571.2 354 76.8
Actinidia00835 Actinidia chinensis HOM05D004538 ORTHO05D006068 4.6e-160 568.2 355 76.3
Aqoxy7G01640 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 4.6e-160 568.2 357 76.2
CANSAT11G1513 Cannabis sativa HOM05D004538 ORTHO05D006068 1.3e-159 566.6 357 75.9
Hund19415 Selenicereus undatus HOM05D004538 ORTHO05D006068 1.8e-159 566.2 357 75.1
CSS0012792 Camellia sinensis var. sinensis HOM05D004538 ORTHO05D006068 2.3e-159 565.8 357 75.1
CDE03G0061 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 2.3e-159 565.8 290 96.6
Os08g0496000 Oryza sativa ssp. japonica HOM05D004538 ORTHO05D006068 8.7e-159 563.9 356 75.3
RcHm_v2.0_Chr6g0267391 Rosa chinensis HOM05D004538 ORTHO05D006068 8.7e-159 563.9 357 75.6
Hma1.2p1_0321F.1_g124200 Hydrangea macrophylla HOM05D004538 ORTHO05D006068 1.1e-158 563.5 357 76.2
QL09p046970 Quercus lobata HOM05D004538 ORTHO05D006068 1.1e-158 563.5 357 75.4
GSVIVG01014777001 Vitis vinifera HOM05D004538 ORTHO05D006068 1.5e-158 563.1 357 75.4
FAN11G3993 Fragaria x ananassa HOM05D004538 ORTHO05D006068 2.5e-158 562.4 357 75.6
Ah.12g065010 Amaranthus hybridus HOM05D004538 ORTHO05D006068 3.3e-158 562.0 357 73.9
ECA236G0032 Erigeron canadensis HOM05D004538 ORTHO05D006068 3.3e-158 562.0 356 75.3
Prupe.4G230100 Prunus persica HOM05D004538 ORTHO05D006068 3.3e-158 562.0 357 75.1
Prupe.8G086500 Prunus persica HOM05D004538 ORTHO05D006068 4.3e-158 561.6 357 75.1
EL10Ac2g02751 Beta vulgaris HOM05D004538 ORTHO05D006068 5.6e-158 561.2 357 74.2
AUR62001067 Chenopodium quinoa HOM05D004538 ORTHO05D006068 5.6e-158 561.2 357 73.9
CsaV3_4G008160 Cucumis sativus L. HOM05D004538 ORTHO05D006068 5.6e-158 561.2 357 74.8
Lalb_Chr04g0247681 Lupinus albus HOM05D004538 ORTHO05D006068 7.4e-158 560.8 356 75.8
DCAR_013768 Daucus carota HOM05D004538 ORTHO05D006068 9.6e-158 560.5 356 75.0
Lj8A182T63 Lonicera japonica HOM05D004538 ORTHO05D006068 9.6e-158 560.5 357 75.1
Nitab4.5_0005622g0040 Nicotiana tabacum HOM05D004538 ORTHO05D006068 9.6e-158 560.5 357 74.5
Lsat_1_v5_gn_7_116401 Lactuca sativa HOM05D004538 ORTHO05D006068 1.3e-157 560.1 356 74.2
FvH4_3g41910 Fragaria vesca HOM05D004538 ORTHO05D006068 1.6e-157 559.7 357 75.1
RcHm_v2.0_Chr5g0075121 Rosa chinensis HOM05D004538 ORTHO05D006068 1.6e-157 559.7 357 75.1
COL.COLO4_07768 Corchorus olitorius HOM05D004538 ORTHO05D006068 2.8e-157 558.9 357 74.2
Haze_03267 Corylus avellana HOM05D004538 ORTHO05D006068 2.8e-157 558.9 357 74.8
THA.LOC104811692 Tarenaya hassleriana HOM05D004538 ORTHO05D006068 2.8e-157 558.9 356 74.7
FAN21G0976 Fragaria x ananassa HOM05D004538 ORTHO05D006068 4.8e-157 558.1 357 74.5
HanXRQChr04g0114571 Helianthus annuus HOM05D004538 ORTHO05D006068 4.8e-157 558.1 356 74.2
VMungo0647G1241 Vigna mungo HOM05D004538 ORTHO05D006068 4.8e-157 558.1 357 75.9
PGR083G1782 Punica granatum HOM05D004538 ORTHO05D006068 6.2e-157 557.8 357 74.2
Sed0002758 Sechium edule HOM05D004538 ORTHO05D006068 8.1e-157 557.4 357 74.8
Sc07g0002240 Simmondsia chinensis HOM05D004538 ORTHO05D006068 8.1e-157 557.4 357 73.4
FAN25G0511 Fragaria x ananassa HOM05D004538 ORTHO05D006068 1.1e-156 557.0 357 74.2
Lj1C898T12 Lonicera japonica HOM05D004538 ORTHO05D006068 1.1e-156 557.0 357 73.9
Eucgr.F02006 Eucalyptus grandis HOM05D004538 ORTHO05D006068 1.4e-156 556.6 356 73.9
Dinv31347 Davidia involucrata HOM05D004538 ORTHO05D006068 1.8e-156 556.2 342 76.3
Ciclev10008262m.g Citrus clementina HOM05D004538 ORTHO05D006068 3.1e-156 555.4 356 75.0
ClCG07G010160 Citrullus lanatus HOM05D004538 ORTHO05D006068 4.0e-156 555.1 368 73.1
HPP92_015457 Vanilla planifolia HOM05D004538 ORTHO05D006068 5.3e-156 554.7 356 72.8
Phvul.008G282700 Phaseolus vulgaris HOM05D004538 ORTHO05D006068 9.0e-156 553.9 357 74.5
SGA_v2.0_scaffold62G21339 Striga asiatica HOM05D004538 ORTHO05D006068 2.0e-155 552.7 356 73.9
Glyma.02G303400 Glycine max HOM05D004538 ORTHO05D006068 2.6e-155 552.4 357 74.2
Peaxi162Scf00173g00324 Petunia axillaris HOM05D004538 ORTHO05D006068 2.6e-155 552.4 356 74.7
Thecc.07G004000 Theobroma cacao HOM05D004538 ORTHO05D006068 2.6e-155 552.4 357 72.8
LjContig00081g0007081 Lotus japonicus HOM05D004538 ORTHO05D006068 3.4e-155 552.0 357 74.2
CiPaw.15G107100 Carya illinoinensis HOM05D004538 ORTHO05D006068 4.5e-155 551.6 357 72.8
MELO3C016120.2 Cucumis melo HOM05D004538 ORTHO05D006068 4.5e-155 551.6 368 72.6
HanXRQChr11g0334561 Helianthus annuus HOM05D004538 ORTHO05D006068 4.5e-155 551.6 356 73.0
Sopen11g002920 Solanum pennellii HOM05D004538 ORTHO05D006068 7.6e-155 550.8 357 73.7
Solyc11g007000.2 Solanum lycopersicum HOM05D004538 ORTHO05D006068 9.9e-155 550.4 357 73.9
Duzib268G1486 Durio zibethinus HOM05D004538 ORTHO05D006068 1.3e-154 550.1 357 72.8
SalBow6G4226 Salvia bowleyana HOM05D004538 ORTHO05D006068 1.3e-154 550.1 356 73.6
TWI39G0910 Tripterygium wilfordii HOM05D004538 ORTHO05D006068 1.3e-154 550.1 357 74.2
unitig_899.g14715 Utricularia gibba HOM05D004538 ORTHO05D006068 2.2e-154 549.3 356 72.2
AL2G22990 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 2.9e-154 548.9 356 72.2
CAN.G645.5 Capsicum annuum HOM05D004538 ORTHO05D006068 2.9e-154 548.9 357 73.7
Ca_06424_v3 Cicer arietinum L. HOM05D000527 ORTHO05D000559 3.8e-154 548.5 357 73.4
Thhalv10013497m.g Eutrema salsugineum HOM05D004538 ORTHO05D006068 3.8e-154 548.5 356 72.2
Lj5g0024294 Lotus japonicus HOM05D004538 ORTHO05D006068 4.9e-154 548.1 357 73.9
AL8G31670 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 8.4e-154 547.4 356 71.9
Sp6g17940 Schrenkiella parvula HOM05D004538 ORTHO05D006068 8.4e-154 547.4 356 71.9
AT5G56090 Arabidopsis thaliana HOM05D004538 ORTHO05D006068 1.4e-153 546.6 356 71.9
Migut.F00884 Erythranthe guttata HOM05D004538 ORTHO05D006068 1.9e-153 546.2 356 73.6
Oeu036424.1 Olea europaea HOM05D004538 ORTHO05D006068 1.9e-153 546.2 356 74.2
Glyma.14G010400 Glycine max HOM05D004538 ORTHO05D006068 2.4e-153 545.8 357 73.4
Gohir.A13G129700 Gossypium hirsutum HOM05D004538 ORTHO05D006068 3.2e-153 545.4 357 71.4
Cc02_g09720 Coffea canephora HOM05D004538 ORTHO05D006068 4.2e-153 545.0 357 72.5
Gohir.D13G132900 Gossypium hirsutum HOM05D004538 ORTHO05D006068 4.2e-153 545.0 357 71.4
AL2G24490 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 5.5e-153 544.7 356 71.6
C09p47190 Brassica napus HOM05D002718 ORTHO05D003269 5.5e-153 544.7 356 72.2
BraA10t43427Z Brassica rapa HOM05D004538 ORTHO05D006068 7.1e-153 544.3 356 71.9
Potri.011G166800 Populus trichocarpa HOM05D004538 ORTHO05D006068 7.1e-153 544.3 357 72.5
BcaB08g35975 Brassica carinata HOM05D004538 ORTHO05D006068 9.3e-153 543.9 356 71.9
CARHR269470 Cardamine hirsuta HOM05D004538 ORTHO05D006068 9.3e-153 543.9 356 71.9
Gorai.013G149100 Gossypium raimondii HOM05D004538 ORTHO05D006068 9.3e-153 543.9 357 71.1
PGSC0003DMG400023975 Solanum tuberosum HOM05D004538 ORTHO05D006068 9.3e-153 543.9 357 73.4
BolC9t57574H Brassica oleracea HOM05D004538 ORTHO05D006068 1.2e-152 543.5 356 71.9
Cc02_g29800 Coffea canephora HOM05D004538 ORTHO05D006068 1.2e-152 543.5 357 72.8
Medtr5g096830 Medicago truncatula HOM05D004538 ORTHO05D006068 1.6e-152 543.1 356 73.3
Sabra11G0139500 Salix brachista HOM05D004538 ORTHO05D006068 2.1e-152 542.7 357 72.3
BcaC04g20148 Brassica carinata HOM05D004538 ORTHO05D006068 2.7e-152 542.3 357 71.7
Cpa.g.sc97.88 Carica papaya HOM05D004538 ORTHO05D006068 2.7e-152 542.3 357 72.8
BcaC04g20158 Brassica carinata HOM05D004538 ORTHO05D006068 3.5e-152 542.0 356 71.6
Carub.0008s1641 Capsella rubella HOM05D004538 ORTHO05D006068 3.5e-152 542.0 356 71.1
arahy.Tifrunner.gnm1.ann1.0Z7D2W Arachis hypogaea HOM05D004538 ORTHO05D006068 4.6e-152 541.6 356 73.9
A10p13290 Brassica napus HOM05D002718 ORTHO05D003269 4.6e-152 541.6 356 71.6
TPR.G1264 Trifolium pratense HOM05D004538 ORTHO05D006068 4.6e-152 541.6 356 72.8
BcaC04g20151 Brassica carinata HOM05D004538 ORTHO05D006068 6.0e-152 541.2 357 71.4
Aa31LG3G12000 Aethionema arabicum HOM05D004538 ORTHO05D006068 7.9e-152 540.8 356 71.9
arahy.Tifrunner.gnm1.ann1.01YFCZ Arachis hypogaea HOM05D004538 ORTHO05D006068 7.9e-152 540.8 356 73.9
Medtr3g095790 Medicago truncatula HOM05D004538 ORTHO05D006068 7.9e-152 540.8 357 72.3
Psat2g005560 Pisum sativum HOM05D004538 ORTHO05D006068 7.9e-152 540.8 356 73.3
vmacro09607 Vaccinium macrocarpon HOM05D004538 ORTHO05D006068 3.9e-151 538.5 414 64.7
C09p47240 Brassica napus HOM05D004538 ORTHO05D006068 6.7e-151 537.7 354 71.5
Mapoly0020s0071 Marchantia polymorpha HOM05D004538 ORTHO05D006068 1.5e-142 510.0 351 68.7
MD02G1271400 Malus domestica HOM05D004538 ORTHO05D006068 8.2e-141 504.2 310 75.8
Zm00001eb033900 Zea mays HOM05D004538 ORTHO05D006068 6.9e-140 501.1 356 67.4
Pp3c7_5710 Physcomitrium patens HOM05D004538 ORTHO05D006068 4.6e-136 488.4 350 66.3
CDE02G3208 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 1.0e-135 487.3 357 66.7
AUR62032611 Chenopodium quinoa HOM05D004538 ORTHO05D006068 5.3e-132 474.9 357 66.1
AagrBONN_evm.TU.Sc2ySwM_368.2501 Anthoceros agrestis HOM05D004538 ORTHO05D006068 6.5e-130 468.0 343 66.2
CBR_g24146 Chara braunii HOM05D004538 ORTHO05D006068 2.7e-128 462.6 344 64.5
SMO353G0004 Selaginella moellendorffii HOM05D004538 ORTHO05D006068 1.7e-125 453.4 341 65.1
AUR62031724 Chenopodium quinoa HOM05D004538 ORTHO05D006068 4.8e-125 451.8 358 63.4
Cc02_g29840 Coffea canephora HOM05D004538 ORTHO05D006068 4.5e-123 445.3 344 65.7
Nitab4.5_0001437g0060 Nicotiana tabacum HOM05D004538 ORTHO05D006068 1.4e-119 433.7 259 77.2
BolC9t57580H Brassica oleracea HOM05D004538 ORTHO05D006068 3.3e-118 429.1 357 59.9
Atru.chr2.2684 Acer truncatum HOM05D004538 ORTHO05D006068 4.0e-111 405.6 276 69.9
Manes.01G005033 Manihot esculenta HOM05D004538 ORTHO05D006068 1.5e-110 403.7 357 58.5
AL8G31690 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 9.7e-110 401.0 306 63.7
FvH4_2g10180 Fragaria vesca HOM05D004538 ORTHO05D006068 3.7e-101 372.5 222 78.8
Cre02.g082700 Chlamydomonas reinhardtii HOM05D004538 ORTHO05D006068 8.3e-101 371.3 352 54.5
Aa31LG3G11950 Aethionema arabicum HOM05D004538 ORTHO05D006068 7.7e-99 364.8 252 69.0
SalBow6G3380 Salvia bowleyana HOM05D004538 ORTHO05D006068 5.7e-94 348.6 358 52.2
FAN24G0261 Fragaria x ananassa HOM05D004538 ORTHO05D006068 1.3e-93 347.4 273 63.7
PRCOL_00000259 Prasinoderma coloniale HOM05D004538 ORTHO05D006068 1.3e-93 347.4 330 53.6
Potri.001G469701 Populus trichocarpa HOM05D004538 ORTHO05D006068 5.4e-92 342.0 274 62.4
MD07G1040600 Malus domestica HOM05D004538 ORTHO05D006068 1.8e-87 327.0 229 69.4
SEGI_29632 Sequoiadendron giganteum HOM05D004538 ORTHO05D006068 8.3e-85 318.2 201 73.6
A10p13310 Brassica napus HOM05D004538 ORTHO05D006068 1.2e-80 304.3 237 64.1
Atru.chr2.2623 Acer truncatum HOM05D004538 ORTHO05D006068 8.9e-79 298.1 211 70.1
Duzib213G1090 Durio zibethinus HOM05D004538 ORTHO05D006068 8.9e-79 298.1 221 66.1
Nitab4.5_0004391g0070 Nicotiana tabacum HOM05D004538 ORTHO05D006068 1.2e-75 287.7 222 65.8
Aqoxy289s001 Aquilegia oxysepala HOM05D004538 ORTHO05D008153 3.2e-68 263.1 207 64.3
Cc02_g29790 Coffea canephora HOM05D004538 ORTHO05D006068 1.3e-66 257.7 227 58.6
Haze_27104 Corylus avellana HOM05D004538 ORTHO05D163757 8.9e-63 245.0 352 41.2
Aqoxy2G00269 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 1.4e-60 237.7 177 66.1
Haze_26959 Corylus avellana HOM05D004538 ORTHO05D165751 1.4e-55 221.1 292 42.1
MSTRG.9067 Avicennia marina HOM05D004538 ORTHO05D006068 9.0e-55 218.4 124 79.8
SHI46402 Sapria himalayana HOM05D004538 ORTHO05D006068 3.4e-54 216.5 139 74.8
SHI05855 Sapria himalayana HOM05D004538 ORTHO05D006068 1.1e-49 201.4 139 70.5
Atru.chr2.2696 Acer truncatum HOM05D004538 ORTHO05D006068 5.8e-46 189.1 135 70.4
SHI05856 Sapria himalayana HOM05D004538 ORTHO05D006068 9.6e-41 171.8 133 65.4
Aqoxy2G00270 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 6.2e-32 142.5 85 76.5
Duzib268G1762 Durio zibethinus HOM05D004538 ORTHO05D006068 2.5e-28 130.6 115 56.5
QL03p014007 Quercus lobata HOM05D001565 ORTHO05D005515 3.2e-28 130.2 118 58.5
Atru.chr2.2627 Acer truncatum HOM05D000397 ORTHO05D002023 1.3e-26 124.8 111 62.2
ATR0499G006 Amborella trichopoda HOM05D004538 ORTHO05D066479 2.4e-23 114.0 118 55.1
MSTRG.9065 Avicennia marina HOM05D004538 ORTHO05D006068 6.9e-23 112.5 63 79.4
MSTRG.9077 Avicennia marina HOM05D004538 ORTHO05D006068 1.9e-20 104.4 77 67.5
QL10p039376 Quercus lobata HOM05D004538 ORTHO05D006068 4.3e-17 93.2 57 71.9
Atru.chr2.2679 Acer truncatum HOM05D004538 ORTHO05D052265 1.7e-16 91.3 68 64.7
QL02p081848 Quercus lobata HOM05D007814 ORTHO05D009902 2.9e-13 80.5 50 70.0
RcHm_v2.0_Chr6g0267421 Rosa chinensis HOM05D004538 ORTHO05D006068 4.2e-12 76.6 59 72.9
ATR0499G019 Amborella trichopoda HOM05D004538 ORTHO05D006068 7.2e-12 75.9 58 56.9
MD02G1271500 Malus domestica HOM05D004538 ORTHO05D006068 2.1e-11 74.3 59 69.5
Cc02_g29820 Coffea canephora HOM05D004538 ORTHO05D006068 2.0e-09 67.8 67 52.2
Oeu026585.1 Olea europaea HOM05D004538 ORTHO05D289065 1.8e-07 61.2 221 25.8
Atru.chr2.2641 Acer truncatum HOM05D004538 ORTHO05D052874 4.5e-06 56.6 43 60.5


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