Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0651 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 3.2e-129 465.3 274 100.0
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 1.6e-32 144.1 284 41.5
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 9.0e-31 138.3 269 40.5
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 5.8e-30 135.6 269 43.1
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 5.8e-30 135.6 274 42.0
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 2.2e-29 133.7 260 44.2
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 3.8e-29 132.9 280 41.8
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 8.4e-29 131.7 250 44.4
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 1.4e-28 131.0 250 45.2
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 4.2e-28 129.4 272 41.9
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 5.5e-28 129.0 271 43.9
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 9.3e-28 128.3 277 43.0
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 1.2e-27 127.9 249 43.4
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 6.0e-27 125.6 271 40.2
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 6.0e-27 125.6 267 42.7
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 7.9e-27 125.2 264 40.9
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 1.0e-26 124.8 254 37.4
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 1.0e-26 124.8 253 43.1
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 2.3e-26 123.6 275 40.7
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.0e-26 123.2 265 36.6
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 3.9e-26 122.9 258 36.8
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 1.1e-25 121.3 265 36.6
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 1.1e-25 121.3 265 36.2
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 1.9e-25 120.6 276 34.8
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 2.5e-25 120.2 276 34.8
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 2.5e-25 120.2 268 39.6
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 3.3e-25 119.8 275 34.9
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 4.3e-25 119.4 270 34.8
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 4.3e-25 119.4 263 41.1
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 4.3e-25 119.4 265 36.2
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 4.3e-25 119.4 267 33.7
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 7.4e-25 118.6 217 44.2
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 9.7e-25 118.2 267 41.6
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 9.7e-25 118.2 281 35.6
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 1.3e-24 117.9 264 41.7
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 1.3e-24 117.9 270 36.3
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 2.2e-24 117.1 256 36.3
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 2.2e-24 117.1 256 39.5
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 3.7e-24 116.3 263 36.5
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 4.8e-24 115.9 293 37.2
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 6.3e-24 115.5 293 33.4
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 6.3e-24 115.5 279 35.1
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 1.4e-23 114.4 272 37.5
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.8e-23 114.0 272 39.3
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 1.8e-23 114.0 255 39.2
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 2.4e-23 113.6 260 41.5
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 3.1e-23 113.2 263 42.6
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 5.3e-23 112.5 263 34.6
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 6.9e-23 112.1 257 40.1
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 6.9e-23 112.1 262 35.5
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 9.0e-23 111.7 257 38.1
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 1.2e-22 111.3 267 33.3
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 2.0e-22 110.5 270 40.7
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 2.6e-22 110.2 258 39.9
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 3.4e-22 109.8 264 41.3
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 5.9e-22 109.0 255 39.2
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 1.7e-21 107.5 257 37.4
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 2.9e-21 106.7 255 38.0
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 3.8e-21 106.3 262 39.3
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 3.8e-21 106.3 261 40.2
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 3.8e-21 106.3 286 31.1
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 8.5e-21 105.1 255 38.0
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 8.5e-21 105.1 270 39.3
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 1.1e-20 104.8 256 39.8
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 1.4e-20 104.4 278 38.8
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 5.5e-20 102.4 286 38.5
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 9.3e-20 101.7 265 30.9
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 1.2e-19 101.3 267 36.7
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 1.6e-19 100.9 248 40.3
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 2.1e-19 100.5 256 40.6
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 2.7e-19 100.1 266 36.5
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 3.6e-19 99.8 258 34.9
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 3.6e-19 99.8 255 39.2
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 3.6e-19 99.8 276 38.0
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 4.6e-19 99.4 257 38.5
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 7.9e-19 98.6 251 39.0
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 1.0e-18 98.2 239 41.8
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.3e-18 97.1 250 37.2
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 3.9e-18 96.3 255 38.0
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 5.1e-18 95.9 270 32.2
Lj3A151T24 Lonicera japonica HOM05D003570 ORTHO05D004207 6.7e-18 95.5 114 49.1
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 6.7e-18 95.5 108 50.9
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 8.8e-18 95.1 106 51.9
Rhsim12G0107900 Rhododendron simsii HOM05D003570 ORTHO05D004207 1.5e-17 94.4 239 36.4
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 4.3e-17 92.8 237 39.2
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 7.4e-17 92.0 255 36.9
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 2.2e-16 90.5 261 38.3
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.8e-16 90.1 295 34.6
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.4e-15 87.8 241 30.7
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.4e-15 87.8 95 48.4
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 1.4e-15 87.8 107 49.5
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 3.1e-15 86.7 257 37.7
Nitab4.5_0000229g0020 Nicotiana tabacum HOM05D003570 ORTHO05D004207 3.1e-15 86.7 110 45.5
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 9.1e-15 85.1 261 33.7
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 1.2e-14 84.7 103 47.6
Nitab4.5_0000229g0040 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.5e-14 84.3 154 39.6
vmacro16170 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.5e-14 84.3 268 34.0
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 3.4e-14 83.2 264 35.6
Aqoxy5G03687 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 4.5e-14 82.8 104 47.1
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 1.3e-13 81.3 255 34.5
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 6.5e-13 79.0 234 36.3
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.1e-12 78.2 251 27.5
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 5.5e-12 75.9 251 27.9
TAR374G0931 Trochodendron aralioides HOM05D003570 ORTHO05D004207 2.1e-11 73.9 113 42.5
FAN13G1935 Fragaria x ananassa HOM05D003570 ORTHO05D004207 4.7e-11 72.8 97 42.3
PSO063G3896 Papaver somniferum HOM05D003570 ORTHO05D004207 7.9e-11 72.0 228 38.2
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 2.3e-10 70.5 249 32.9
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 3.9e-10 69.7 250 30.4
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 6.7e-10 68.9 97 43.3
AagrBONN_evm.TU.Sc2ySwM_344.4464 Anthoceros agrestis HOM05D003570 ORTHO05D004207 1.3e-08 64.7 109 39.4
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 6.3e-08 62.4 102 35.3
unitig_22.g6425 Utricularia gibba HOM05D003570 ORTHO05D004207 9.1e-07 58.5 164 36.0
CSS0031984 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 3.4e-06 56.6 73 41.1


User provided reference genes

Program Settings