Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0629 Ceratophyllum demersum HOM05D000189 ORTHO05D007859 3.1e-36 154.5 71 100.0
TAR628G1698 Trochodendron aralioides HOM05D000189 ORTHO05D007859 1.1e-28 129.4 65 86.2
Atru.chr4.1118 Acer truncatum HOM05D000189 ORTHO05D007859 1.9e-28 128.6 66 86.4
Nn5g28246 Nelumbo nucifera HOM05D000189 ORTHO05D007859 4.1e-28 127.5 65 84.6
CSS0023610 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D007859 1.2e-27 125.9 64 85.9
ATR0709G034 Amborella trichopoda HOM05D000189 ORTHO05D007859 1.6e-27 125.6 65 84.6
Thecc.01G143200 Theobroma cacao HOM05D000189 ORTHO05D007859 2.0e-27 125.2 66 83.3
FAN28G0421 Fragaria x ananassa HOM05D000189 ORTHO05D007859 4.6e-27 124.0 65 81.5
MBI03_g11131_MAGBIO Magnolia biondii HOM05D000189 ORTHO05D007859 7.8e-27 123.2 65 84.6
FAN26G1447 Fragaria x ananassa HOM05D000189 ORTHO05D007859 1.3e-26 122.5 65 80.0
Aqoxy5G02356 Aquilegia oxysepala HOM05D000189 ORTHO05D007859 1.7e-26 122.1 65 84.6
FAN19G0214 Fragaria x ananassa HOM05D000189 ORTHO05D007859 3.9e-26 120.9 65 80.0
RcHm_v2.0_Chr2g0123961 Rosa chinensis HOM05D000189 ORTHO05D007859 3.9e-26 120.9 64 81.2
COL.COLO4_12122 Corchorus olitorius HOM05D000189 ORTHO05D007859 5.0e-26 120.6 64 81.2
MELO3C009002.2 Cucumis melo HOM05D000189 ORTHO05D007859 5.0e-26 120.6 65 80.0
CiPaw.04G179600 Carya illinoinensis HOM05D000189 ORTHO05D007859 8.6e-26 119.8 64 82.8
Os11g0545800 Oryza sativa ssp. japonica HOM05D000189 ORTHO05D007859 8.6e-26 119.8 65 78.5
Sopen05g034990 Solanum pennellii HOM05D000189 ORTHO05D007859 8.6e-26 119.8 65 80.0
CsaV3_4G031210 Cucumis sativus L. HOM05D000189 ORTHO05D007859 1.1e-25 119.4 65 78.5
Duzib248G0653 Durio zibethinus HOM05D000189 ORTHO05D007859 1.5e-25 119.0 66 78.8
ClCG04G001170 Citrullus lanatus HOM05D000189 ORTHO05D007859 1.9e-25 118.6 65 78.5
Oeu042315.1 Olea europaea HOM05D000189 ORTHO05D007859 1.9e-25 118.6 67 74.6
Sed0009877 Sechium edule HOM05D000189 ORTHO05D007859 3.3e-25 117.9 65 76.9
Hma1.2p1_0073F.1_g038450 Hydrangea macrophylla HOM05D000189 ORTHO05D007859 5.6e-25 117.1 67 83.6
EL10Ac4g09653 Beta vulgaris HOM05D000189 ORTHO05D007859 9.5e-25 116.3 64 79.7
CAN.G1464.5 Capsicum annuum HOM05D000189 ORTHO05D007859 9.5e-25 116.3 65 78.5
MD00G1127500 Malus domestica HOM05D000189 ORTHO05D007859 9.5e-25 116.3 64 79.7
QL10p039723 Quercus lobata HOM05D000189 ORTHO05D007859 9.5e-25 116.3 63 81.0
TPR.G7871 Trifolium pratense HOM05D000189 ORTHO05D007859 1.2e-24 115.9 65 78.5
BcaB05g21570 Brassica carinata HOM05D000189 ORTHO05D007859 1.6e-24 115.5 64 78.1
C02p03720 Brassica napus HOM05D000189 ORTHO05D007859 1.6e-24 115.5 64 78.1
BolC2t06332H Brassica oleracea HOM05D000189 ORTHO05D007859 1.6e-24 115.5 64 78.1
BraA02t04966Z Brassica rapa HOM05D000189 ORTHO05D007859 1.6e-24 115.5 64 78.1
DCAR_019974 Daucus carota HOM05D000189 ORTHO05D007859 1.6e-24 115.5 66 77.3
Thhalv10013591m.g Eutrema salsugineum HOM05D000189 ORTHO05D007859 1.6e-24 115.5 63 77.8
Medtr3g097060 Medicago truncatula HOM05D000189 ORTHO05D007859 1.6e-24 115.5 65 76.9
Peaxi162Scf00925g00013 Petunia axillaris HOM05D000189 ORTHO05D007859 1.6e-24 115.5 65 80.0
BcaC03g13240 Brassica carinata HOM05D000189 ORTHO05D007859 2.1e-24 115.2 64 78.1
Sp6g34160 Schrenkiella parvula HOM05D000189 ORTHO05D007859 2.8e-24 114.8 65 75.4
Gohir.D11G229200 Gossypium hirsutum HOM05D000189 ORTHO05D007859 3.6e-24 114.4 66 75.8
Gorai.003G068400 Gossypium raimondii HOM05D000189 ORTHO05D007859 3.6e-24 114.4 66 75.8
Lj1g0005687 Lotus japonicus HOM05D000189 ORTHO05D007859 4.7e-24 114.0 64 81.2
Lalb_Chr08g0237931 Lupinus albus HOM05D000189 ORTHO05D007859 4.7e-24 114.0 64 78.1
Carub.0006s0768 Capsella rubella HOM05D000189 ORTHO05D007859 6.2e-24 113.6 65 75.4
Sc09g0002050 Simmondsia chinensis HOM05D000189 ORTHO05D007859 6.2e-24 113.6 66 78.8
Manes.17G018825 Manihot esculenta HOM05D000189 ORTHO05D007859 8.0e-24 113.2 63 81.0
Glyma.04G206900 Glycine max HOM05D000189 ORTHO05D007859 1.1e-23 112.8 64 79.7
Gohir.A11G224808 Gossypium hirsutum HOM05D000189 ORTHO05D007859 1.4e-23 112.5 66 74.2
Actinidia06600 Actinidia chinensis HOM05D000189 ORTHO05D007859 1.8e-23 112.1 60 83.3
Ah.02g117830 Amaranthus hybridus HOM05D000189 ORTHO05D007859 2.3e-23 111.7 66 75.8
AT5G08710 Arabidopsis thaliana HOM05D000189 ORTHO05D007859 2.3e-23 111.7 65 73.8
Ca_17028_v3 Cicer arietinum L. HOM05D000189 ORTHO05D007859 2.3e-23 111.7 71 73.2
Eucgr.I00040 Eucalyptus grandis HOM05D000189 ORTHO05D007859 2.3e-23 111.7 64 76.6
Sabra05G0058100 Salix brachista HOM05D000189 ORTHO05D007859 2.3e-23 111.7 67 74.6
Aa31LG3G17850 Aethionema arabicum HOM05D000189 ORTHO05D007859 4.0e-23 110.9 65 72.3
AL6G19440 Arabidopsis lyrata HOM05D000189 ORTHO05D007859 4.0e-23 110.9 64 75.0
Zm00001eb197640 Zea mays HOM05D000189 ORTHO05D007859 4.0e-23 110.9 64 75.0
Psat5g058320 Pisum sativum HOM05D000189 ORTHO05D007859 5.2e-23 110.5 65 76.9
GSVIVG01022385001 Vitis vinifera HOM05D000189 ORTHO05D007859 5.2e-23 110.5 65 73.8
AUR62006916 Chenopodium quinoa HOM05D000189 ORTHO05D007859 6.8e-23 110.2 66 74.2
arahy.Tifrunner.gnm1.ann1.50NT7J Arachis hypogaea HOM05D000189 ORTHO05D007859 8.9e-23 109.8 64 76.6
arahy.Tifrunner.gnm1.ann1.682KPN Arachis hypogaea HOM05D000189 ORTHO05D007859 8.9e-23 109.8 64 76.6
Cc00_g14750 Coffea canephora HOM05D000189 ORTHO05D007859 8.9e-23 109.8 64 73.4
Potri.005G071000 Populus trichocarpa HOM05D000189 ORTHO05D007859 1.2e-22 109.4 63 79.4
PGR119G1265 Punica granatum HOM05D000189 ORTHO05D007859 9.8e-22 106.3 64 73.4
HPP92_027204 Vanilla planifolia HOM05D000189 ORTHO05D007859 1.3e-21 105.9 64 68.8
unitig_60.g25691 Utricularia gibba HOM05D000189 ORTHO05D007859 2.2e-21 105.1 67 67.2
PSO210G6791 Papaver somniferum HOM05D000189 ORTHO05D007859 4.9e-21 104.0 68 72.1
Migut.L00584 Erythranthe guttata HOM05D000189 ORTHO05D007859 6.4e-21 103.6 64 68.8
Lsat_1_v5_gn_1_80940 Lactuca sativa HOM05D000189 ORTHO05D007859 6.4e-21 103.6 64 70.3
ECA248G3490 Erigeron canadensis HOM05D000552 ORTHO05D007859 8.3e-21 103.2 65 69.2
HanXRQChr01g0019121 Helianthus annuus HOM05D000189 ORTHO05D007859 1.1e-20 102.8 64 70.3
VMungo1309G2090 Vigna mungo HOM05D000189 ORTHO05D007859 1.4e-20 102.4 58 77.6
Migut.L00266 Erythranthe guttata HOM05D000189 ORTHO05D007859 2.4e-20 101.7 64 67.2
Pp3c14_25730 Physcomitrium patens HOM05D000189 ORTHO05D007859 1.1e-17 92.8 65 67.7
AagrBONN_evm.TU.Sc2ySwM_344.533 Anthoceros agrestis HOM05D000189 ORTHO05D007859 3.6e-16 87.8 62 61.3
SMO144G0111 Selaginella moellendorffii HOM05D000189 ORTHO05D007859 1.1e-15 86.3 63 60.3
AUR62000563 Chenopodium quinoa HOM05D000189 ORTHO05D007859 8.9e-15 83.2 50 72.0
Mapoly0001s0080 Marchantia polymorpha HOM05D000189 ORTHO05D007859 9.9e-14 79.7 63 57.1
Rhsim10G0130500 Rhododendron simsii HOM05D000189 ORTHO05D007859 2.3e-10 68.6 40 75.0
PRCOL_00005967 Prasinoderma coloniale HOM05D000189 ORTHO05D007859 1.1e-07 59.7 63 49.2
MCO03G005 Micromonas commoda HOM05D000189 ORTHO05D007859 2.4e-07 58.5 64 53.1
CBR_g98 Chara braunii HOM05D004510 ORTHO05D005302 4.0e-07 57.8 45 57.8
Dinv06652 Davidia involucrata HOM05D000189 ORTHO05D007859 8.9e-07 56.6 26 92.3
Nitab4.5_0000905g0080 Nicotiana tabacum HOM05D000189 ORTHO05D007859 5.8e-06 53.9 30 80.0
vmacro12776 Vaccinium macrocarpon HOM05D000189 ORTHO05D007859 5.8e-06 53.9 26 88.5


User provided reference genes

Program Settings