Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 4.0e-57 224.6 115 100.0
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 2.4e-46 188.7 111 88.3
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 1.1e-22 110.2 111 52.3
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 9.3e-22 107.1 115 54.8
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 6.1e-21 104.4 111 49.5
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 8.7e-20 100.5 109 52.3
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 1.5e-19 99.8 113 51.3
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 9.7e-19 97.1 113 46.9
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 2.8e-18 95.5 115 47.8
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 2.8e-18 95.5 113 47.8
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 3.7e-18 95.1 115 47.8
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 6.3e-18 94.4 113 46.0
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 1.4e-17 93.2 108 50.9
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 4.1e-17 91.7 114 46.5
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 4.1e-17 91.7 113 47.8
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 5.3e-17 91.3 116 44.8
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 1.2e-16 90.1 113 47.8
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 1.2e-16 90.1 116 44.0
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 3.4e-16 88.6 116 48.3
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 4.5e-16 88.2 113 48.7
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 4.5e-16 88.2 115 44.3
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 4.5e-16 88.2 115 48.7
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 5.9e-16 87.8 109 43.1
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 5.9e-16 87.8 111 44.1
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 7.7e-16 87.4 111 47.7
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 7.7e-16 87.4 118 39.0
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 7.7e-16 87.4 116 43.1
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 7.7e-16 87.4 117 47.0
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 1.0e-15 87.0 115 44.3
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 2.2e-15 85.9 118 48.3
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 2.2e-15 85.9 113 46.0
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 6.5e-15 84.3 114 43.9
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 8.5e-15 84.0 114 42.1
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 8.5e-15 84.0 114 42.1
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 1.1e-14 83.6 108 49.1
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 1.1e-14 83.6 114 41.2
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 1.9e-14 82.8 111 44.1
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 2.5e-14 82.4 121 46.3
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 4.2e-14 81.6 111 43.2
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 4.2e-14 81.6 116 45.7
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 5.5e-14 81.3 113 39.8
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 1.2e-13 80.1 113 40.7
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 1.2e-13 80.1 117 43.6
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.6e-13 79.7 111 42.3
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 2.7e-13 79.0 118 41.5
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 7.9e-13 77.4 108 41.7
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 1.4e-12 76.6 112 43.8
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 1.8e-12 76.3 108 42.6
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 5.1e-12 74.7 119 39.5
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 6.7e-12 74.3 111 37.8
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 8.8e-12 73.9 109 41.3
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 8.8e-12 73.9 109 41.3
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 1.5e-11 73.2 108 40.7
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.5e-11 73.2 113 39.8
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 2.0e-11 72.8 108 40.7
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 2.5e-11 72.4 85 45.9
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 2.5e-11 72.4 113 41.6
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 3.3e-11 72.0 116 41.4
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 3.3e-11 72.0 109 43.1
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 3.3e-11 72.0 114 38.6
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 3.3e-11 72.0 116 38.8
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 4.3e-11 71.6 114 38.6
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 5.7e-11 71.2 111 37.8
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 9.7e-11 70.5 120 38.3
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.7e-10 69.7 115 39.1
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 2.2e-10 69.3 109 42.2
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 2.2e-10 69.3 117 40.2
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 4.8e-10 68.2 113 40.7
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 4.8e-10 68.2 119 41.2
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 1.1e-09 67.0 166 36.7
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 1.8e-09 66.2 108 37.0
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 4.1e-09 65.1 114 39.5
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.5e-08 63.2 113 41.6
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 2.6e-08 62.4 112 36.6
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 2.6e-08 62.4 115 38.3
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 3.4e-08 62.0 115 38.3
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 5.9e-08 61.2 109 37.6
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 5.9e-08 61.2 132 29.5
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 7.7e-08 60.8 117 37.6
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 7.7e-08 60.8 119 38.7
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 1.3e-07 60.1 116 36.2
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 1.3e-07 60.1 70 42.9
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 1.7e-07 59.7 89 41.6
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 1.7e-07 59.7 116 39.7
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 3.8e-07 58.5 91 40.7
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 8.5e-07 57.4 122 35.2
BraA07t30840Z Brassica rapa HOM05D006456 ORTHO05D007588 1.4e-06 56.6 91 42.9
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 2.5e-06 55.8 117 37.6
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 3.2e-06 55.5 113 31.0
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 4.2e-06 55.1 54 51.9
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 5.5e-06 54.7 115 33.9


User provided reference genes

Program Settings