Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 7.5e-86 320.5 161 100.0
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 6.9e-63 244.2 154 77.9
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 4.6e-59 231.5 159 71.7
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 1.1e-57 226.9 157 71.3
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 1.3e-56 223.4 158 69.6
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 1.6e-56 223.0 157 71.3
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 2.1e-56 222.6 153 71.9
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 2.1e-56 222.6 153 71.9
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 2.8e-56 222.2 157 70.7
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 2.8e-56 222.2 157 70.7
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 3.6e-56 221.9 157 71.3
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 4.8e-56 221.5 166 71.7
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 8.1e-56 220.7 153 73.2
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 1.4e-55 219.9 163 69.3
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 1.4e-55 219.9 158 65.2
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 1.8e-55 219.5 151 72.2
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 1.8e-55 219.5 160 66.9
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 1.8e-55 219.5 158 67.7
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 2.4e-55 219.2 151 74.2
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 1.2e-54 216.9 153 71.2
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 4.5e-54 214.9 159 67.9
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 1.7e-53 213.0 158 67.1
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 3.8e-53 211.8 153 70.6
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 3.8e-53 211.8 159 71.1
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 3.8e-53 211.8 158 67.1
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 3.8e-53 211.8 155 69.7
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 4.9e-53 211.5 153 69.9
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 6.4e-53 211.1 157 70.7
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 8.4e-53 210.7 160 67.5
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 8.4e-53 210.7 153 70.6
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 8.4e-53 210.7 153 70.6
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 8.4e-53 210.7 157 65.0
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 1.1e-52 210.3 169 65.7
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 1.1e-52 210.3 169 65.7
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 1.4e-52 209.9 157 70.7
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 2.4e-52 209.1 159 66.7
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 5.4e-52 208.0 157 67.5
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 7.1e-52 207.6 157 70.1
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 9.3e-52 207.2 157 68.2
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 1.6e-51 206.5 157 67.5
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 2.7e-51 205.7 150 70.7
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 2.7e-51 205.7 155 66.5
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 2.7e-51 205.7 154 66.2
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 4.6e-51 204.9 160 63.1
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 6.0e-51 204.5 148 68.9
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 6.0e-51 204.5 154 66.2
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.0e-50 203.8 157 68.2
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.0e-50 203.8 159 64.8
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.0e-50 203.8 155 65.8
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 1.3e-50 203.4 150 70.0
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 1.3e-50 203.4 150 70.0
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 1.3e-50 203.4 150 69.3
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.8e-50 203.0 150 69.3
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 2.3e-50 202.6 151 69.5
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 3.9e-50 201.8 162 64.2
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 6.7e-50 201.1 157 66.9
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 6.7e-50 201.1 151 68.2
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 1.1e-49 200.3 168 63.1
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 4.3e-49 198.4 162 63.0
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 5.6e-49 198.0 158 61.4
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 5.6e-49 198.0 157 66.2
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 5.6e-49 198.0 157 66.2
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 5.6e-49 198.0 154 64.9
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 7.4e-49 197.6 159 62.9
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 1.3e-48 196.8 158 66.5
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 1.6e-48 196.4 158 64.6
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 2.8e-48 195.7 154 64.9
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 2.8e-48 195.7 164 62.8
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 6.2e-48 194.5 169 63.9
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 6.2e-48 194.5 158 64.6
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 1.1e-47 193.7 158 63.9
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 1.4e-47 193.4 141 68.1
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 1.8e-47 193.0 159 64.2
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 2.4e-47 192.6 161 66.5
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 2.4e-47 192.6 152 66.4
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 2.4e-47 192.6 154 65.6
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 4.0e-47 191.8 152 64.5
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 5.3e-47 191.4 155 62.6
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 1.5e-46 189.9 159 64.8
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 2.6e-46 189.1 232 48.3
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 4.5e-46 188.3 156 64.7
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 7.6e-46 187.6 156 64.7
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 9.9e-46 187.2 155 61.9
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 1.3e-45 186.8 150 65.3
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 1.3e-45 186.8 152 63.8
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 2.2e-45 186.0 158 62.7
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 5.5e-44 181.4 153 62.1
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.1e-43 179.5 154 62.3
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.1e-43 179.5 154 62.3
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 3.0e-42 175.6 157 63.1
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 3.7e-40 168.7 152 59.9
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 6.2e-40 167.9 163 54.0
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 1.1e-39 167.2 152 59.2
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 3.4e-30 135.6 96 76.0
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 8.5e-29 131.0 151 49.7
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.1e-28 130.6 126 58.7
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 9.3e-28 127.5 156 46.2
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.1e-25 120.6 114 59.6
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 1.9e-25 119.8 162 45.7
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 2.5e-25 119.4 81 70.4
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 3.3e-25 119.0 170 41.2
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 5.7e-25 118.2 110 57.3
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 1.3e-24 117.1 66 80.3
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.8e-23 113.2 66 81.8
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.0e-21 107.5 66 75.8
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 6.5e-21 104.8 65 73.8
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.5e-20 102.8 66 74.2
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 1.0e-18 97.4 164 41.5
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 2.3e-18 96.3 69 72.5
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 1.3e-16 90.5 71 66.2
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 3.8e-13 79.0 74 58.1
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.9e-12 76.6 78 56.4
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 1.5e-09 67.0 90 42.2
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 2.0e-06 56.6 41 63.4


User provided reference genes

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